Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 Y_RNA.218-201ENST00000364218 104 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 RNA5SP245-201ENST00000364239 121 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 Y_RNA.344-201ENST00000365381 112 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 RNU6-571P-201ENST00000384128 107 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 MIR635-201ENST00000384830 98 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 MIR34C-201ENST00000384831 77 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 MIR518A1-201ENST00000385068 85 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 RNU6-659P-201ENST00000516454 104 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 RNU6-1018P-201ENST00000516577 106 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 MIR4679-2-201ENST00000578358 77 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 U6.95-201ENST00000636931 70 ntBASIC0.46□□□□□ -2.34
DHX40Q8IX18 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.46□□□□□ -2.34
DHX40Q8IX18 Y_RNA.507-201ENST00000384500 99 ntBASIC0.45□□□□□ -2.34
DHX40Q8IX18 RPL39P34-201ENST00000477141 156 ntBASIC0.45□□□□□ -2.34
DHX40Q8IX18 MIR2909-201ENST00000617113 69 ntBASIC0.45□□□□□ -2.34
DHX40Q8IX18 RNU6-1313P-201ENST00000362622 102 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 Y_RNA.362-201ENST00000365518 110 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 SNORD116-14-201ENST00000383894 92 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 SNORD116-17-201ENST00000383929 92 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 SNORD116-15-201ENST00000384445 92 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 SNORD116-19-201ENST00000384729 92 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 MIR519A1-201ENST00000385257 85 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 MIR1912-201ENST00000410389 80 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 TMSB4XP3-201ENST00000445144 114 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 SNRPGP12-201ENST00000449481 213 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 RNU6-863P-201ENST00000515989 104 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 RNA5SP268-201ENST00000516828 124 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 AC244669.1-204ENST00000621564 178 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 AC091304.10-201ENST00000641554 121 ntBASIC0.44□□□□□ -2.34
DHX40Q8IX18 RNU6-1099P-201ENST00000363533 107 ntBASIC0.43□□□□□ -2.34
DHX40Q8IX18 RNU6-81P-201ENST00000365608 104 ntBASIC0.43□□□□□ -2.34
DHX40Q8IX18 RNU6-409P-201ENST00000384114 104 ntBASIC0.43□□□□□ -2.34
DHX40Q8IX18 Y_RNA.525-201ENST00000384570 113 ntBASIC0.43□□□□□ -2.34
DHX40Q8IX18 SNORA7.5-201ENST00000410672 110 ntBASIC0.43□□□□□ -2.34
DHX40Q8IX18 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
DHX40Q8IX18 AC097635.1-201ENST00000450678 155 ntBASIC0.43□□□□□ -2.34
DHX40Q8IX18 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
DHX40Q8IX18 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
DHX40Q8IX18 RNU6-170P-201ENST00000362832 104 ntBASIC0.42□□□□□ -2.34
DHX40Q8IX18 BX276092.1-201ENST00000427368 251 ntBASIC0.42□□□□□ -2.34
DHX40Q8IX18 AL162726.3-218ENST00000636401 95 ntBASIC0.42□□□□□ -2.34
DHX40Q8IX18 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
DHX40Q8IX18 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 SNORD115-24-201ENST00000363528 82 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 Y_RNA.155-201ENST00000363632 101 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 RNU6-959P-201ENST00000384671 107 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 RNA5SP63-201ENST00000391225 112 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 SUMO1P3-201ENST00000439961 304 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 Y_RNA.649-201ENST00000459077 103 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 TRAJ51-201ENST00000504127 63 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 RNA5SP227-201ENST00000516184 113 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.41□□□□□ -2.34
DHX40Q8IX18 SNORA25.18-201ENST00000607153 114 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 AL512310.12-203ENST00000640543 90 ntBASIC0.41□□□□□ -2.34
DHX40Q8IX18 SNORD38.1-201ENST00000363863 68 ntBASIC0.4□□□□□ -2.35
DHX40Q8IX18 Y_RNA.309-201ENST00000365046 111 ntBASIC0.4□□□□□ -2.35
DHX40Q8IX18 RNU6-816P-201ENST00000390914 107 ntBASIC0.4□□□□□ -2.35
DHX40Q8IX18 RNU6-1268P-201ENST00000391214 107 ntBASIC0.4□□□□□ -2.35
DHX40Q8IX18 RNU6-1239P-201ENST00000391310 107 ntBASIC0.4□□□□□ -2.35
DHX40Q8IX18 AC007012.1-201ENST00000567192 175 ntBASIC0.4□□□□□ -2.35
DHX40Q8IX18 AC023932.2-201ENST00000603176 175 ntBASIC0.4□□□□□ -2.35
DHX40Q8IX18 Y_RNA.49-201ENST00000362714 112 ntBASIC0.39□□□□□ -2.35
DHX40Q8IX18 Y_RNA.563-201ENST00000384707 108 ntBASIC0.39□□□□□ -2.35
DHX40Q8IX18 AL353813.1-201ENST00000440700 253 ntBASIC0.39□□□□□ -2.35
DHX40Q8IX18 RNU6-1006P-201ENST00000516998 103 ntBASIC0.39□□□□□ -2.35
DHX40Q8IX18 MIR7107-201ENST00000611489 80 ntBASIC0.39□□□□□ -2.35
DHX40Q8IX18 SNORD44.1-201ENST00000363202 61 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 Y_RNA.342-201ENST00000365352 113 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 RNU6-35P-201ENST00000384530 107 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 MIR599-201ENST00000385069 95 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 MIR548A3-201ENST00000385297 97 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 RNU2-59P-201ENST00000410482 191 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 SNORD63B-201ENST00000411005 70 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 RNA5SP476-201ENST00000516613 103 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 RNU6-850P-201ENST00000516934 103 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 MTND5P40-201ENST00000559945 246 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 AL670379.3-201ENST00000605040 251 ntBASIC0.38□□□□□ -2.35
DHX40Q8IX18 RNA5SP403-201ENST00000363598 108 ntBASIC0.37□□□□□ -2.35
DHX40Q8IX18 AC008267.6-201ENST00000441664 139 ntBASIC0.37□□□□□ -2.35
DHX40Q8IX18 RNU6-1333P-201ENST00000516162 93 ntBASIC0.37□□□□□ -2.35
DHX40Q8IX18 SNORD33.1-201ENST00000516213 88 ntBASIC0.37□□□□□ -2.35
DHX40Q8IX18 Y_RNA.35-201ENST00000362601 101 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 RNU6-1260P-201ENST00000362944 107 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 Y_RNA.353-201ENST00000365440 108 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 Y_RNA.377-201ENST00000365644 108 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 RNU6-1126P-201ENST00000384002 107 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 RNU6-1201P-201ENST00000384227 107 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 RNU6-848P-201ENST00000515948 107 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 Y_RNA.809-201ENST00000516058 95 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 RNU6-617P-201ENST00000516147 107 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 RNU6-473P-201ENST00000516164 107 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 RNU6-1049P-201ENST00000516414 107 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 RNU7-161P-201ENST00000517289 62 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 RNU6-90P-201ENST00000606352 106 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 AL442128.1-201ENST00000615151 90 ntBASIC0.36□□□□□ -2.35
DHX40Q8IX18 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
DHX40Q8IX18 AL603908.1-201ENST00000406098 201 ntBASIC0.35□□□□□ -2.35
DHX40Q8IX18 MIR548G-201ENST00000408442 89 ntBASIC0.35□□□□□ -2.35
DHX40Q8IX18 RNA5SP285-201ENST00000516619 119 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms