Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU7-165P-201ENST00000458864 60 ntBASIC-0.21□□□□□ -2.44
PRPF39Q86UA1 RNU7-13P-201ENST00000516413 62 ntBASIC-0.21□□□□□ -2.44
PRPF39Q86UA1 RNU6-388P-201ENST00000517012 105 ntBASIC-0.21□□□□□ -2.44
PRPF39Q86UA1 RNU6-389P-201ENST00000517048 105 ntBASIC-0.21□□□□□ -2.44
PRPF39Q86UA1 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.21□□□□□ -2.44
PRPF39Q86UA1 AL670379.3-201ENST00000605040 251 ntBASIC-0.21□□□□□ -2.44
PRPF39Q86UA1 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.22□□□□□ -2.44
PRPF39Q86UA1 SNORA32.1-201ENST00000364514 115 ntBASIC-0.22□□□□□ -2.44
PRPF39Q86UA1 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.22□□□□□ -2.44
PRPF39Q86UA1 MIR513C-201ENST00000401352 84 ntBASIC-0.22□□□□□ -2.44
PRPF39Q86UA1 SNORD110-201ENST00000408189 75 ntBASIC-0.22□□□□□ -2.44
PRPF39Q86UA1 RNA5SP484-201ENST00000458857 111 ntBASIC-0.22□□□□□ -2.44
PRPF39Q86UA1 RNU6-138P-201ENST00000515952 107 ntBASIC-0.22□□□□□ -2.44
PRPF39Q86UA1 NAMPTP3-201ENST00000569273 224 ntBASIC-0.22□□□□□ -2.44
PRPF39Q86UA1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.22□□□□□ -2.44
PRPF39Q86UA1 RNU6-915P-201ENST00000364943 103 ntBASIC-0.23□□□□□ -2.45
PRPF39Q86UA1 RNU6-302P-201ENST00000365249 107 ntBASIC-0.23□□□□□ -2.45
PRPF39Q86UA1 RNU6-571P-201ENST00000384128 107 ntBASIC-0.23□□□□□ -2.45
PRPF39Q86UA1 SNORD38.2-201ENST00000384470 69 ntBASIC-0.23□□□□□ -2.45
PRPF39Q86UA1 RNU7-74P-201ENST00000459104 62 ntBASIC-0.23□□□□□ -2.45
PRPF39Q86UA1 MIR3163-201ENST00000581592 73 ntBASIC-0.23□□□□□ -2.45
PRPF39Q86UA1 AL353621.2-201ENST00000605340 133 ntBASIC-0.23□□□□□ -2.45
PRPF39Q86UA1 AC021753.1-201ENST00000635724 168 ntBASIC-0.23□□□□□ -2.45
PRPF39Q86UA1 RNU6-460P-201ENST00000391158 108 ntBASIC-0.24□□□□□ -2.45
PRPF39Q86UA1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.24□□□□□ -2.45
PRPF39Q86UA1 RNA5SP395-201ENST00000516567 118 ntBASIC-0.24□□□□□ -2.45
PRPF39Q86UA1 RNU6-682P-201ENST00000363843 106 ntBASIC-0.25□□□□□ -2.45
PRPF39Q86UA1 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.25□□□□□ -2.45
PRPF39Q86UA1 RNU6-524P-201ENST00000384270 107 ntBASIC-0.25□□□□□ -2.45
PRPF39Q86UA1 MIR519A1-201ENST00000385257 85 ntBASIC-0.25□□□□□ -2.45
PRPF39Q86UA1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.25□□□□□ -2.45
PRPF39Q86UA1 RNU6-180P-201ENST00000516697 61 ntBASIC-0.25□□□□□ -2.45
PRPF39Q86UA1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.25□□□□□ -2.45
PRPF39Q86UA1 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.25□□□□□ -2.45
PRPF39Q86UA1 MIR6514-201ENST00000622549 70 ntBASIC-0.25□□□□□ -2.45
PRPF39Q86UA1 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.26□□□□□ -2.45
PRPF39Q86UA1 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.26□□□□□ -2.45
PRPF39Q86UA1 MIR34C-201ENST00000384831 77 ntBASIC-0.26□□□□□ -2.45
PRPF39Q86UA1 RNU7-106P-201ENST00000459514 67 ntBASIC-0.26□□□□□ -2.45
PRPF39Q86UA1 AC104692.1-201ENST00000472406 90 ntBASIC-0.26□□□□□ -2.45
PRPF39Q86UA1 MIR3920-201ENST00000581751 86 ntBASIC-0.26□□□□□ -2.45
PRPF39Q86UA1 MIR1295B-201ENST00000636144 60 ntBASIC-0.26□□□□□ -2.45
PRPF39Q86UA1 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.27□□□□□ -2.45
PRPF39Q86UA1 SNORA75.1-201ENST00000391130 148 ntBASIC-0.27□□□□□ -2.45
PRPF39Q86UA1 RNU6-521P-201ENST00000516663 105 ntBASIC-0.27□□□□□ -2.45
PRPF39Q86UA1 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.27□□□□□ -2.45
PRPF39Q86UA1 SNORA81.3-201ENST00000517283 198 ntBASIC-0.27□□□□□ -2.45
PRPF39Q86UA1 MTND5P40-201ENST00000559945 246 ntBASIC-0.27□□□□□ -2.45
PRPF39Q86UA1 MIR3121-201ENST00000579680 77 ntBASIC-0.27□□□□□ -2.45
PRPF39Q86UA1 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.28□□□□□ -2.45
PRPF39Q86UA1 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.28□□□□□ -2.45
PRPF39Q86UA1 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.28□□□□□ -2.45
PRPF39Q86UA1 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.28□□□□□ -2.45
PRPF39Q86UA1 SNORD116-18-201ENST00000383961 92 ntBASIC-0.28□□□□□ -2.45
PRPF39Q86UA1 RNU6-35P-201ENST00000384530 107 ntBASIC-0.28□□□□□ -2.45
PRPF39Q86UA1 MT-TI-201ENST00000387365 69 ntBASIC-0.28□□□□□ -2.45
PRPF39Q86UA1 RNU6-850P-201ENST00000516934 103 ntBASIC-0.28□□□□□ -2.45
PRPF39Q86UA1 MIR548AG2-201ENST00000581228 64 ntBASIC-0.28□□□□□ -2.45
PRPF39Q86UA1 AC087741.2-201ENST00000619415 172 ntBASIC-0.28□□□□□ -2.45
PRPF39Q86UA1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.29□□□□□ -2.46
PRPF39Q86UA1 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.29□□□□□ -2.46
PRPF39Q86UA1 AC084368.1-201ENST00000620935 65 ntBASIC-0.29□□□□□ -2.46
PRPF39Q86UA1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.29□□□□□ -2.46
PRPF39Q86UA1 RNU6-647P-201ENST00000364243 107 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 MIR516B1-201ENST00000385211 90 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 MIR214-201ENST00000385214 110 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 MT-TG-201ENST00000387429 68 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 MIR1263-201ENST00000408324 86 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 MIR1912-201ENST00000410389 80 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 RNU7-197P-201ENST00000458836 62 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 AC074198.2-201ENST00000508153 258 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 AP001328.1-201ENST00000528550 176 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 AC004792.1-201ENST00000614523 137 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 RN7SL660P-201ENST00000614852 299 ntBASIC-0.3□□□□□ -2.46
PRPF39Q86UA1 SNORD115-19-201ENST00000363098 82 ntBASIC-0.31□□□□□ -2.46
PRPF39Q86UA1 SNORD114-31-201ENST00000363219 75 ntBASIC-0.31□□□□□ -2.46
PRPF39Q86UA1 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.31□□□□□ -2.46
PRPF39Q86UA1 SNORD115-18-201ENST00000363293 82 ntBASIC-0.31□□□□□ -2.46
PRPF39Q86UA1 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.31□□□□□ -2.46
PRPF39Q86UA1 SNORD115-17-201ENST00000364612 82 ntBASIC-0.31□□□□□ -2.46
PRPF39Q86UA1 MIR4473-201ENST00000583731 91 ntBASIC-0.31□□□□□ -2.46
PRPF39Q86UA1 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.31□□□□□ -2.46
PRPF39Q86UA1 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.32□□□□□ -2.46
PRPF39Q86UA1 MIR516A2-201ENST00000384888 90 ntBASIC-0.32□□□□□ -2.46
PRPF39Q86UA1 MIR516A1-201ENST00000385033 90 ntBASIC-0.32□□□□□ -2.46
PRPF39Q86UA1 MIR876-201ENST00000401147 81 ntBASIC-0.32□□□□□ -2.46
PRPF39Q86UA1 SNORD4A-201ENST00000459174 72 ntBASIC-0.32□□□□□ -2.46
PRPF39Q86UA1 RN7SKP19-201ENST00000516016 252 ntBASIC-0.32□□□□□ -2.46
PRPF39Q86UA1 SNORA25.13-201ENST00000516395 103 ntBASIC-0.32□□□□□ -2.46
PRPF39Q86UA1 IGKV1-22-201ENST00000524313 326 ntBASIC-0.32□□□□□ -2.46
PRPF39Q86UA1 MIR5589-201ENST00000579442 60 ntBASIC-0.32□□□□□ -2.46
PRPF39Q86UA1 MIR4636-201ENST00000582271 80 ntBASIC-0.32□□□□□ -2.46
PRPF39Q86UA1 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.33□□□□□ -2.46
PRPF39Q86UA1 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.33□□□□□ -2.46
PRPF39Q86UA1 RNU1-141P-201ENST00000364623 158 ntBASIC-0.33□□□□□ -2.46
PRPF39Q86UA1 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.33□□□□□ -2.46
PRPF39Q86UA1 RNA5SP136-201ENST00000410906 107 ntBASIC-0.33□□□□□ -2.46
PRPF39Q86UA1 AL161932.1-201ENST00000437408 146 ntBASIC-0.33□□□□□ -2.46
PRPF39Q86UA1 CR383656.4-201ENST00000546909 122 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms