Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 SNORD111-201ENST00000408139 94 ntBASIC1.15□□□□□ -2.23
YTHDF3Q7Z739 Y_RNA.609-201ENST00000410669 89 ntBASIC1.15□□□□□ -2.23
YTHDF3Q7Z739 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
YTHDF3Q7Z739 AC022137.1-201ENST00000483735 151 ntBASIC1.15□□□□□ -2.23
YTHDF3Q7Z739 RNU7-40P-201ENST00000516397 64 ntBASIC1.15□□□□□ -2.23
YTHDF3Q7Z739 MIR3660-201ENST00000584845 100 ntBASIC1.15□□□□□ -2.23
YTHDF3Q7Z739 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
YTHDF3Q7Z739 Y_RNA.13-201ENST00000362403 112 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 Y_RNA.57-201ENST00000362806 113 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 RNU6-403P-201ENST00000363163 104 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 RNU4-58P-201ENST00000363192 141 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 RNY1P1-201ENST00000364372 112 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 MIR1257-201ENST00000408490 117 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 MIR4771-2-201ENST00000577758 74 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 MIR4771-1-201ENST00000582617 74 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 MIR6082-201ENST00000613604 109 ntBASIC1.14□□□□□ -2.23
YTHDF3Q7Z739 MIR96-201ENST00000362288 78 ntBASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 Y_RNA.42-201ENST00000362660 108 ntBASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 RNU6-979P-201ENST00000383896 107 ntBASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 SNORA72.6-201ENST00000384520 129 ntBASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 MIR125B2-201ENST00000385128 89 ntBASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 RPS26P5-201ENST00000418544 335 ntBASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 RNU6-1194P-201ENST00000516208 104 ntBASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 AC013244.2-201ENST00000603396 103 ntBASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 IGLL4P-201ENST00000614590 133 ntBASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
YTHDF3Q7Z739 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 RNU6-633P-201ENST00000362612 103 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 SNORD36A-201ENST00000362874 73 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 SNORD115-27-201ENST00000364430 82 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 Y_RNA.540-201ENST00000384638 111 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 MIR516A2-201ENST00000384888 90 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 MIR516A1-201ENST00000385033 90 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 SNORD100-201ENST00000408573 76 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 AL161932.1-201ENST00000437408 146 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 RNU7-85P-201ENST00000458851 63 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 RNU7-90P-201ENST00000459216 62 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 RNU7-106P-201ENST00000459514 67 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 RNU6-765P-201ENST00000516916 99 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 MIR4676-201ENST00000583078 72 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 MIR6515-201ENST00000619843 57 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 MIR1245B-201ENST00000636115 69 ntBASIC1.12□□□□□ -2.23
YTHDF3Q7Z739 RNU6-509P-201ENST00000363519 107 ntBASIC1.11□□□□□ -2.23
YTHDF3Q7Z739 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
YTHDF3Q7Z739 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
YTHDF3Q7Z739 SNORA70.22-201ENST00000517160 124 ntBASIC1.11□□□□□ -2.23
YTHDF3Q7Z739 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.11□□□□□ -2.23
YTHDF3Q7Z739 MIR5588-201ENST00000581890 63 ntBASIC1.11□□□□□ -2.23
YTHDF3Q7Z739 AC022709.1-201ENST00000615967 87 ntBASIC1.11□□□□□ -2.23
YTHDF3Q7Z739 RNU6-787P-201ENST00000384032 107 ntBASIC1.1□□□□□ -2.23
YTHDF3Q7Z739 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
YTHDF3Q7Z739 SNORD63B-201ENST00000411005 70 ntBASIC1.1□□□□□ -2.23
YTHDF3Q7Z739 SNORD4B-201ENST00000459083 72 ntBASIC1.1□□□□□ -2.23
YTHDF3Q7Z739 Y_RNA.648-201ENST00000459455 110 ntBASIC1.1□□□□□ -2.23
YTHDF3Q7Z739 TRAJ51-201ENST00000504127 63 ntBASIC1.1□□□□□ -2.23
YTHDF3Q7Z739 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
YTHDF3Q7Z739 SNORD92-201ENST00000585078 85 ntBASIC1.1□□□□□ -2.23
YTHDF3Q7Z739 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.1□□□□□ -2.23
YTHDF3Q7Z739 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
YTHDF3Q7Z739 RNA5SP327-201ENST00000362494 101 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 RNU1-93P-201ENST00000364704 169 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 RNU6-1254P-201ENST00000391266 104 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 AC002429.1-201ENST00000437672 148 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 snoU13.11-201ENST00000459219 104 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 RNU7-171P-201ENST00000459581 62 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 RPS29P1-201ENST00000465274 159 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 RNU7-156P-201ENST00000517214 74 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 MIR548BB-201ENST00000626714 66 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 AC006160.2-201ENST00000637708 154 ntBASIC1.09□□□□□ -2.23
YTHDF3Q7Z739 Y_RNA.56-201ENST00000362798 112 ntBASIC1.08□□□□□ -2.24
YTHDF3Q7Z739 Y_RNA.219-201ENST00000364232 113 ntBASIC1.08□□□□□ -2.24
YTHDF3Q7Z739 RNU6-1276P-201ENST00000365372 104 ntBASIC1.08□□□□□ -2.24
YTHDF3Q7Z739 Y_RNA.536-201ENST00000384621 113 ntBASIC1.08□□□□□ -2.24
YTHDF3Q7Z739 MIR519A1-201ENST00000385257 85 ntBASIC1.08□□□□□ -2.24
YTHDF3Q7Z739 RNU6-1275P-201ENST00000391087 107 ntBASIC1.08□□□□□ -2.24
YTHDF3Q7Z739 MIR4804-201ENST00000581683 73 ntBASIC1.08□□□□□ -2.24
YTHDF3Q7Z739 AC008608.1-201ENST00000603910 127 ntBASIC1.08□□□□□ -2.24
YTHDF3Q7Z739 RNU6-228P-201ENST00000362700 106 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 SNORD26-201ENST00000384147 75 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 RNU6-519P-201ENST00000410590 108 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 AC092628.1-201ENST00000436250 252 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 RNU7-56P-201ENST00000458744 62 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 RNU6-75P-201ENST00000515944 104 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 RNU6-448P-201ENST00000517052 107 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 RNU6-1223P-201ENST00000517124 104 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 AP003327.1-201ENST00000529684 127 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 MIR151B-201ENST00000584249 96 ntBASIC1.07□□□□□ -2.24
YTHDF3Q7Z739 SNORD114-26-201ENST00000363543 72 ntBASIC1.06□□□□□ -2.24
YTHDF3Q7Z739 RNU6-524P-201ENST00000384270 107 ntBASIC1.06□□□□□ -2.24
YTHDF3Q7Z739 SNORD78.1-201ENST00000390866 65 ntBASIC1.06□□□□□ -2.24
YTHDF3Q7Z739 MIR938-201ENST00000401216 83 ntBASIC1.06□□□□□ -2.24
YTHDF3Q7Z739 RNU6-994P-201ENST00000410507 111 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms