Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.54□□□□□ -2.32
SHFQ7M4L6 AC092634.7-201ENST00000621022 103 ntBASIC0.54□□□□□ -2.32
SHFQ7M4L6 AC244669.1-204ENST00000621564 178 ntBASIC0.54□□□□□ -2.32
SHFQ7M4L6 SNORD115-24-201ENST00000363528 82 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 Y_RNA.291-201ENST00000364886 113 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 SNORA8.2-201ENST00000384372 139 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 MIR516A2-201ENST00000384888 90 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 MIR516A1-201ENST00000385033 90 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 RNU6-1053P-201ENST00000515930 101 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 Y_RNA.709-201ENST00000516952 92 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 AC141557.1-201ENST00000540982 400 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 AC096720.1-201ENST00000604441 183 ntBASIC0.53□□□□□ -2.32
SHFQ7M4L6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.52□□□□□ -2.33
SHFQ7M4L6 MIR96-201ENST00000362288 78 ntBASIC0.52□□□□□ -2.33
SHFQ7M4L6 RNU6-1163P-201ENST00000364516 107 ntBASIC0.52□□□□□ -2.33
SHFQ7M4L6 RNU6-1325P-201ENST00000364905 105 ntBASIC0.52□□□□□ -2.33
SHFQ7M4L6 Y_RNA.338-201ENST00000365320 114 ntBASIC0.52□□□□□ -2.33
SHFQ7M4L6 Y_RNA.809-201ENST00000516058 95 ntBASIC0.52□□□□□ -2.33
SHFQ7M4L6 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
SHFQ7M4L6 RNU7-161P-201ENST00000517289 62 ntBASIC0.52□□□□□ -2.33
SHFQ7M4L6 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
SHFQ7M4L6 MIR6828-201ENST00000636181 60 ntBASIC0.52□□□□□ -2.33
SHFQ7M4L6 MIR337-201ENST00000362281 93 ntBASIC0.51□□□□□ -2.33
SHFQ7M4L6 Y_RNA.163-201ENST00000363702 113 ntBASIC0.51□□□□□ -2.33
SHFQ7M4L6 RNU1-93P-201ENST00000364704 169 ntBASIC0.51□□□□□ -2.33
SHFQ7M4L6 SNORA19.1-201ENST00000410656 129 ntBASIC0.51□□□□□ -2.33
SHFQ7M4L6 AL603825.1-201ENST00000438481 80 ntBASIC0.51□□□□□ -2.33
SHFQ7M4L6 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
SHFQ7M4L6 Y_RNA.659-201ENST00000515994 113 ntBASIC0.51□□□□□ -2.33
SHFQ7M4L6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.51□□□□□ -2.33
SHFQ7M4L6 MIR548AI-201ENST00000579940 88 ntBASIC0.51□□□□□ -2.33
SHFQ7M4L6 SNORA25.18-201ENST00000607153 114 ntBASIC0.51□□□□□ -2.33
SHFQ7M4L6 AC091304.10-201ENST00000641554 121 ntBASIC0.51□□□□□ -2.33
SHFQ7M4L6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SHFQ7M4L6 Y_RNA.57-201ENST00000362806 113 ntBASIC0.5□□□□□ -2.33
SHFQ7M4L6 RNU6-1260P-201ENST00000362944 107 ntBASIC0.5□□□□□ -2.33
SHFQ7M4L6 RNA5SP403-201ENST00000363598 108 ntBASIC0.5□□□□□ -2.33
SHFQ7M4L6 Y_RNA.221-201ENST00000364248 96 ntBASIC0.5□□□□□ -2.33
SHFQ7M4L6 RNU6-106P-201ENST00000384405 107 ntBASIC0.5□□□□□ -2.33
SHFQ7M4L6 SNORA40.8-201ENST00000411034 126 ntBASIC0.5□□□□□ -2.33
SHFQ7M4L6 AC109327.2-201ENST00000448339 378 ntBASIC0.5□□□□□ -2.33
SHFQ7M4L6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.5□□□□□ -2.33
SHFQ7M4L6 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
SHFQ7M4L6 RNA5SP268-201ENST00000516828 124 ntBASIC0.5□□□□□ -2.33
SHFQ7M4L6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
SHFQ7M4L6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.49□□□□□ -2.33
SHFQ7M4L6 SNORD118-201ENST00000363593 134 ntBASIC0.49□□□□□ -2.33
SHFQ7M4L6 RNU6-554P-201ENST00000410466 106 ntBASIC0.49□□□□□ -2.33
SHFQ7M4L6 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
SHFQ7M4L6 CYP3A137P-201ENST00000562436 69 ntBASIC0.49□□□□□ -2.33
SHFQ7M4L6 MIR7107-201ENST00000611489 80 ntBASIC0.49□□□□□ -2.33
SHFQ7M4L6 uc_338.28-201ENST00000612082 187 ntBASIC0.49□□□□□ -2.33
SHFQ7M4L6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SHFQ7M4L6 RNU6-1244P-201ENST00000363614 108 ntBASIC0.48□□□□□ -2.33
SHFQ7M4L6 RNU4-36P-201ENST00000364294 144 ntBASIC0.48□□□□□ -2.33
SHFQ7M4L6 SNORD45B-201ENST00000364617 72 ntBASIC0.48□□□□□ -2.33
SHFQ7M4L6 MIR518A1-201ENST00000385068 85 ntBASIC0.48□□□□□ -2.33
SHFQ7M4L6 RNY4P18-201ENST00000391107 89 ntBASIC0.48□□□□□ -2.33
SHFQ7M4L6 RNU6-1254P-201ENST00000391266 104 ntBASIC0.48□□□□□ -2.33
SHFQ7M4L6 Y_RNA.601-201ENST00000410500 113 ntBASIC0.48□□□□□ -2.33
SHFQ7M4L6 RNU6-904P-201ENST00000516206 101 ntBASIC0.48□□□□□ -2.33
SHFQ7M4L6 Y_RNA.10-201ENST00000362371 110 ntBASIC0.47□□□□□ -2.33
SHFQ7M4L6 SNORD36A-201ENST00000362874 73 ntBASIC0.47□□□□□ -2.33
SHFQ7M4L6 Y_RNA.78-201ENST00000362970 110 ntBASIC0.47□□□□□ -2.33
SHFQ7M4L6 RNU6-215P-201ENST00000365169 102 ntBASIC0.47□□□□□ -2.33
SHFQ7M4L6 RNU6-524P-201ENST00000384270 107 ntBASIC0.47□□□□□ -2.33
SHFQ7M4L6 MIR1302-5-201ENST00000408164 150 ntBASIC0.47□□□□□ -2.33
SHFQ7M4L6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
SHFQ7M4L6 RNU7-104P-201ENST00000459398 79 ntBASIC0.47□□□□□ -2.33
SHFQ7M4L6 RNA5SP227-201ENST00000516184 113 ntBASIC0.47□□□□□ -2.33
SHFQ7M4L6 RNU6-86P-201ENST00000606534 107 ntBASIC0.47□□□□□ -2.33
SHFQ7M4L6 Y_RNA.95-201ENST00000363079 95 ntBASIC0.46□□□□□ -2.34
SHFQ7M4L6 RNU6-726P-201ENST00000364680 107 ntBASIC0.46□□□□□ -2.34
SHFQ7M4L6 SNORD20-201ENST00000384550 80 ntBASIC0.46□□□□□ -2.34
SHFQ7M4L6 MIR181B2-201ENST00000385004 89 ntBASIC0.46□□□□□ -2.34
SHFQ7M4L6 SNORD71-201ENST00000411292 86 ntBASIC0.46□□□□□ -2.34
SHFQ7M4L6 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
SHFQ7M4L6 RNU6-537P-201ENST00000517277 103 ntBASIC0.46□□□□□ -2.34
SHFQ7M4L6 MIR4439-201ENST00000583746 80 ntBASIC0.46□□□□□ -2.34
SHFQ7M4L6 MIR548Z-201ENST00000584743 97 ntBASIC0.46□□□□□ -2.34
SHFQ7M4L6 RNU6-1125P-201ENST00000363601 107 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 RNU6-716P-201ENST00000365621 103 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 RNU6-480P-201ENST00000384332 107 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 MIR520E-201ENST00000384867 87 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 MIR590-201ENST00000385008 97 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 RNU6-243P-201ENST00000391140 107 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 RNU6-795P-201ENST00000516323 103 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 RNU6-1265P-201ENST00000516342 103 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 MIR4777-201ENST00000583710 86 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 AC012531.4-201ENST00000616509 177 ntBASIC0.45□□□□□ -2.34
SHFQ7M4L6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.45□□□□□ -2.34
SHFQ7M4L6 Y_RNA.4-201ENST00000362333 112 ntBASIC0.44□□□□□ -2.34
SHFQ7M4L6 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
SHFQ7M4L6 SNORA51.5-201ENST00000384126 131 ntBASIC0.44□□□□□ -2.34
SHFQ7M4L6 Y_RNA.467-201ENST00000384297 102 ntBASIC0.44□□□□□ -2.34
SHFQ7M4L6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
SHFQ7M4L6 SCARNA23-201ENST00000516060 130 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 215.2 ms