Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
RNF111Q6ZNA4 RNU7-10P-201ENST00000607194 63 ntBASIC1.54□□□□□ -2.16
RNF111Q6ZNA4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 RNA5SP190-201ENST00000365222 118 ntBASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 RNU6-364P-201ENST00000384387 107 ntBASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 RNA5SP292-201ENST00000390974 118 ntBASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 RNU7-90P-201ENST00000459216 62 ntBASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 RNU6-75P-201ENST00000515944 104 ntBASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 Y_RNA.809-201ENST00000516058 95 ntBASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 RNA5SP458-201ENST00000516188 119 ntBASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 RNU6-765P-201ENST00000516916 99 ntBASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.53□□□□□ -2.16
RNF111Q6ZNA4 Y_RNA.94-201ENST00000363068 106 ntBASIC1.52□□□□□ -2.17
RNF111Q6ZNA4 RNU6-132P-201ENST00000383863 107 ntBASIC1.52□□□□□ -2.17
RNF111Q6ZNA4 MIR4796-201ENST00000580742 81 ntBASIC1.52□□□□□ -2.17
RNF111Q6ZNA4 MIR4712-201ENST00000583750 82 ntBASIC1.52□□□□□ -2.17
RNF111Q6ZNA4 MIRLET7F1-201ENST00000362202 87 ntBASIC1.51□□□□□ -2.17
RNF111Q6ZNA4 RNU1-17P-201ENST00000363022 152 ntBASIC1.51□□□□□ -2.17
RNF111Q6ZNA4 Y_RNA.221-201ENST00000364248 96 ntBASIC1.51□□□□□ -2.17
RNF111Q6ZNA4 MIR938-201ENST00000401216 83 ntBASIC1.51□□□□□ -2.17
RNF111Q6ZNA4 SNORA70.22-201ENST00000517160 124 ntBASIC1.51□□□□□ -2.17
RNF111Q6ZNA4 MIR3064-201ENST00000581130 66 ntBASIC1.51□□□□□ -2.17
RNF111Q6ZNA4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.51□□□□□ -2.17
RNF111Q6ZNA4 SNORD92-201ENST00000585078 85 ntBASIC1.51□□□□□ -2.17
RNF111Q6ZNA4 AL645939.4-201ENST00000604495 135 ntBASIC1.51□□□□□ -2.17
RNF111Q6ZNA4 AC027335.2-201ENST00000624030 375 ntBASIC1.51□□□□□ -2.17
RNF111Q6ZNA4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 RNU6-369P-201ENST00000362515 102 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 MIR100-201ENST00000385259 80 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 AL606490.4-201ENST00000423117 127 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 AL603825.1-201ENST00000438481 80 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 AL450471.1-201ENST00000447509 127 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 RNU6-977P-201ENST00000516411 103 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 SNORA18.5-201ENST00000516616 101 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 RNU6-448P-201ENST00000517052 107 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 AC104996.3-201ENST00000590718 94 ntBASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
RNF111Q6ZNA4 RNU6-535P-201ENST00000384722 107 ntBASIC1.49□□□□□ -2.17
RNF111Q6ZNA4 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
RNF111Q6ZNA4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.49□□□□□ -2.17
RNF111Q6ZNA4 RNU6-129P-201ENST00000391022 107 ntBASIC1.49□□□□□ -2.17
RNF111Q6ZNA4 RNU7-102P-201ENST00000458948 62 ntBASIC1.49□□□□□ -2.17
RNF111Q6ZNA4 MIR4285-201ENST00000581001 85 ntBASIC1.49□□□□□ -2.17
RNF111Q6ZNA4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RNF111Q6ZNA4 RNA5SP245-201ENST00000364239 121 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 RNU6-291P-201ENST00000384720 107 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 MIR222-201ENST00000384992 110 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 MIR519A1-201ENST00000385257 85 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 MIR548U-201ENST00000390728 81 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 MIR4804-201ENST00000581683 73 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 MIR4781-201ENST00000585250 76 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 AC008608.1-201ENST00000603910 127 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 AL157834.3-201ENST00000615543 103 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 TRDV1-202ENST00000621643 102 ntBASIC1.48□□□□□ -2.17
RNF111Q6ZNA4 RNU6-1260P-201ENST00000362944 107 ntBASIC1.47□□□□□ -2.17
RNF111Q6ZNA4 RNU6-478P-201ENST00000363904 110 ntBASIC1.47□□□□□ -2.17
RNF111Q6ZNA4 Y_RNA.491-201ENST00000384417 107 ntBASIC1.47□□□□□ -2.17
RNF111Q6ZNA4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RNF111Q6ZNA4 AC138907.6-201ENST00000568401 126 ntBASIC1.47□□□□□ -2.17
RNF111Q6ZNA4 AC138869.1-201ENST00000568623 124 ntBASIC1.47□□□□□ -2.17
RNF111Q6ZNA4 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
RNF111Q6ZNA4 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
RNF111Q6ZNA4 MIR1-1-201ENST00000362147 71 ntBASIC1.46□□□□□ -2.18
RNF111Q6ZNA4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.46□□□□□ -2.18
RNF111Q6ZNA4 MIR599-201ENST00000385069 95 ntBASIC1.46□□□□□ -2.18
RNF111Q6ZNA4 AC097635.1-201ENST00000450678 155 ntBASIC1.46□□□□□ -2.18
RNF111Q6ZNA4 RNU6-624P-201ENST00000363411 107 ntBASIC1.45□□□□□ -2.18
RNF111Q6ZNA4 MIR520F-201ENST00000384824 87 ntBASIC1.45□□□□□ -2.18
RNF111Q6ZNA4 MIR518E-201ENST00000385252 88 ntBASIC1.45□□□□□ -2.18
RNF111Q6ZNA4 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
RNF111Q6ZNA4 RNU1-119P-201ENST00000391122 165 ntBASIC1.45□□□□□ -2.18
RNF111Q6ZNA4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.45□□□□□ -2.18
RNF111Q6ZNA4 AC019288.1-201ENST00000557918 224 ntBASIC1.45□□□□□ -2.18
RNF111Q6ZNA4 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
RNF111Q6ZNA4 SNORA63.2-201ENST00000362603 126 ntBASIC1.44□□□□□ -2.18
RNF111Q6ZNA4 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
RNF111Q6ZNA4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
RNF111Q6ZNA4 MIR889-201ENST00000401280 79 ntBASIC1.44□□□□□ -2.18
RNF111Q6ZNA4 AC002429.1-201ENST00000437672 148 ntBASIC1.44□□□□□ -2.18
RNF111Q6ZNA4 AC067940.1-201ENST00000458411 300 ntBASIC1.44□□□□□ -2.18
RNF111Q6ZNA4 RNU7-56P-201ENST00000458744 62 ntBASIC1.44□□□□□ -2.18
RNF111Q6ZNA4 U6.100-201ENST00000636230 99 ntBASIC1.44□□□□□ -2.18
RNF111Q6ZNA4 RNU6-161P-201ENST00000363051 106 ntBASIC1.43□□□□□ -2.18
RNF111Q6ZNA4 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
RNF111Q6ZNA4 RNU6-1108P-201ENST00000516308 104 ntBASIC1.43□□□□□ -2.18
RNF111Q6ZNA4 MIR4662A-201ENST00000637499 67 ntBASIC1.43□□□□□ -2.18
RNF111Q6ZNA4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RNF111Q6ZNA4 RNU6-315P-201ENST00000362666 107 ntBASIC1.42□□□□□ -2.18
RNF111Q6ZNA4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.42□□□□□ -2.18
RNF111Q6ZNA4 SNORD12-201ENST00000391002 90 ntBASIC1.42□□□□□ -2.18
RNF111Q6ZNA4 SNORD90-201ENST00000391145 111 ntBASIC1.42□□□□□ -2.18
RNF111Q6ZNA4 SNORA17.3-201ENST00000391159 129 ntBASIC1.42□□□□□ -2.18
RNF111Q6ZNA4 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
RNF111Q6ZNA4 RNU6-776P-201ENST00000364403 104 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms