Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RNF43Q68DV7 SNORA25.15-201ENST00000516487 89 ntBASIC1.97□□□□□ -2.09
RNF43Q68DV7 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
RNF43Q68DV7 RNU11-2P-201ENST00000516898 142 ntBASIC1.97□□□□□ -2.09
RNF43Q68DV7 MIR4255-201ENST00000579351 72 ntBASIC1.97□□□□□ -2.09
RNF43Q68DV7 TRDV1-202ENST00000621643 102 ntBASIC1.97□□□□□ -2.09
RNF43Q68DV7 MIR101-2-201ENST00000362195 79 ntBASIC1.96□□□□□ -2.1
RNF43Q68DV7 RNA5SP276-201ENST00000362580 94 ntBASIC1.96□□□□□ -2.1
RNF43Q68DV7 Y_RNA.42-201ENST00000362660 108 ntBASIC1.96□□□□□ -2.1
RNF43Q68DV7 RNU6-154P-201ENST00000384306 106 ntBASIC1.96□□□□□ -2.1
RNF43Q68DV7 RNU6-663P-201ENST00000391105 106 ntBASIC1.96□□□□□ -2.1
RNF43Q68DV7 SNORD13-201ENST00000459299 104 ntBASIC1.96□□□□□ -2.1
RNF43Q68DV7 AL133373.1-201ENST00000497098 94 ntBASIC1.96□□□□□ -2.1
RNF43Q68DV7 RNU6-250P-201ENST00000516958 103 ntBASIC1.96□□□□□ -2.1
RNF43Q68DV7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.96□□□□□ -2.1
RNF43Q68DV7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RNF43Q68DV7 MIR377-201ENST00000362145 69 ntBASIC1.95□□□□□ -2.1
RNF43Q68DV7 Y_RNA.239-201ENST00000364444 113 ntBASIC1.95□□□□□ -2.1
RNF43Q68DV7 MIR489-201ENST00000384923 84 ntBASIC1.95□□□□□ -2.1
RNF43Q68DV7 MIR942-201ENST00000401111 86 ntBASIC1.95□□□□□ -2.1
RNF43Q68DV7 MIR18B-201ENST00000454574 71 ntBASIC1.95□□□□□ -2.1
RNF43Q68DV7 Y_RNA.809-201ENST00000516058 95 ntBASIC1.95□□□□□ -2.1
RNF43Q68DV7 RNU7-156P-201ENST00000517214 74 ntBASIC1.95□□□□□ -2.1
RNF43Q68DV7 AC015688.6-201ENST00000577737 104 ntBASIC1.95□□□□□ -2.1
RNF43Q68DV7 MIR3140-201ENST00000583685 90 ntBASIC1.95□□□□□ -2.1
RNF43Q68DV7 SNRPGP19-201ENST00000603826 189 ntBASIC1.95□□□□□ -2.1
RNF43Q68DV7 MIR103A2-201ENST00000362154 78 ntBASIC1.94□□□□□ -2.1
RNF43Q68DV7 RNU6-340P-201ENST00000364005 107 ntBASIC1.94□□□□□ -2.1
RNF43Q68DV7 RNU6-580P-201ENST00000365159 107 ntBASIC1.94□□□□□ -2.1
RNF43Q68DV7 RNU6-291P-201ENST00000384720 107 ntBASIC1.94□□□□□ -2.1
RNF43Q68DV7 MIR9-3-201ENST00000385084 90 ntBASIC1.94□□□□□ -2.1
RNF43Q68DV7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.94□□□□□ -2.1
RNF43Q68DV7 MIR548H5-201ENST00000580314 60 ntBASIC1.94□□□□□ -2.1
RNF43Q68DV7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.94□□□□□ -2.1
RNF43Q68DV7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
RNF43Q68DV7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RNF43Q68DV7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
RNF43Q68DV7 RNA5SP264-201ENST00000363115 107 ntBASIC1.93□□□□□ -2.1
RNF43Q68DV7 MIR519A1-201ENST00000385257 85 ntBASIC1.93□□□□□ -2.1
RNF43Q68DV7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RNF43Q68DV7 AL356379.1-201ENST00000414105 126 ntBASIC1.93□□□□□ -2.1
RNF43Q68DV7 SNORA77B-201ENST00000578179 125 ntBASIC1.93□□□□□ -2.1
RNF43Q68DV7 MIR4696-201ENST00000581431 70 ntBASIC1.93□□□□□ -2.1
RNF43Q68DV7 RNU6-664P-201ENST00000362381 107 ntBASIC1.92□□□□□ -2.1
RNF43Q68DV7 RNU6-1260P-201ENST00000362944 107 ntBASIC1.92□□□□□ -2.1
RNF43Q68DV7 RNY4P3-201ENST00000365254 95 ntBASIC1.92□□□□□ -2.1
RNF43Q68DV7 RPS27P16-201ENST00000425758 201 ntBASIC1.92□□□□□ -2.1
RNF43Q68DV7 AC092628.1-201ENST00000436250 252 ntBASIC1.92□□□□□ -2.1
RNF43Q68DV7 snoU13.18-201ENST00000459483 104 ntBASIC1.92□□□□□ -2.1
RNF43Q68DV7 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
RNF43Q68DV7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.92□□□□□ -2.1
RNF43Q68DV7 RNU7-10P-201ENST00000607194 63 ntBASIC1.92□□□□□ -2.1
RNF43Q68DV7 U6.100-201ENST00000636230 99 ntBASIC1.92□□□□□ -2.1
RNF43Q68DV7 AC023934.1-201ENST00000574529 2389 ntBASIC1.92□□□□□ -2.1
RNF43Q68DV7 Y_RNA.13-201ENST00000362403 112 ntBASIC1.91□□□□□ -2.1
RNF43Q68DV7 SNORD101-201ENST00000384027 73 ntBASIC1.91□□□□□ -2.1
RNF43Q68DV7 RNA5SP212-201ENST00000391223 107 ntBASIC1.91□□□□□ -2.1
RNF43Q68DV7 RNU4-62P-201ENST00000410125 130 ntBASIC1.91□□□□□ -2.1
RNF43Q68DV7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.91□□□□□ -2.1
RNF43Q68DV7 AP1B1P2-201ENST00000416196 106 ntBASIC1.91□□□□□ -2.1
RNF43Q68DV7 RNU7-185P-201ENST00000459215 60 ntBASIC1.91□□□□□ -2.1
RNF43Q68DV7 snoU13.21-201ENST00000459368 105 ntBASIC1.91□□□□□ -2.1
RNF43Q68DV7 MIR3122-201ENST00000577243 73 ntBASIC1.91□□□□□ -2.1
RNF43Q68DV7 Y_RNA.56-201ENST00000362798 112 ntBASIC1.9□□□□□ -2.11
RNF43Q68DV7 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
RNF43Q68DV7 RNU6-471P-201ENST00000383944 106 ntBASIC1.9□□□□□ -2.11
RNF43Q68DV7 MIR17-201ENST00000385012 84 ntBASIC1.9□□□□□ -2.11
RNF43Q68DV7 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
RNF43Q68DV7 MIR2113-201ENST00000459007 91 ntBASIC1.9□□□□□ -2.11
RNF43Q68DV7 Y_RNA.697-201ENST00000516776 113 ntBASIC1.9□□□□□ -2.11
RNF43Q68DV7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF43Q68DV7 MIR6082-201ENST00000613604 109 ntBASIC1.9□□□□□ -2.11
RNF43Q68DV7 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.9□□□□□ -2.11
RNF43Q68DV7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RNF43Q68DV7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RNF43Q68DV7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RNF43Q68DV7 AC005520.4-201ENST00000604337 90 ntBASIC1.89□□□□□ -2.11
RNF43Q68DV7 AL627230.6-201ENST00000611129 280 ntBASIC1.89□□□□□ -2.11
RNF43Q68DV7 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
RNF43Q68DV7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF43Q68DV7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.88□□□□□ -2.11
RNF43Q68DV7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RNF43Q68DV7 MIR1257-201ENST00000408490 117 ntBASIC1.88□□□□□ -2.11
RNF43Q68DV7 Y_RNA.606-201ENST00000410579 103 ntBASIC1.88□□□□□ -2.11
RNF43Q68DV7 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
RNF43Q68DV7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF43Q68DV7 MIR3675-201ENST00000583661 73 ntBASIC1.88□□□□□ -2.11
RNF43Q68DV7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF43Q68DV7 RNU6-681P-201ENST00000364012 104 ntBASIC1.87□□□□□ -2.11
RNF43Q68DV7 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
RNF43Q68DV7 SNORD45A-201ENST00000384512 84 ntBASIC1.87□□□□□ -2.11
RNF43Q68DV7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RNF43Q68DV7 SNORD83.1-201ENST00000411362 77 ntBASIC1.87□□□□□ -2.11
RNF43Q68DV7 RNU6-1052P-201ENST00000411398 104 ntBASIC1.87□□□□□ -2.11
RNF43Q68DV7 RNU6-719P-201ENST00000516671 104 ntBASIC1.87□□□□□ -2.11
RNF43Q68DV7 BX248123.2-201ENST00000606318 124 ntBASIC1.87□□□□□ -2.11
RNF43Q68DV7 AL773524.1-201ENST00000614065 229 ntBASIC1.87□□□□□ -2.11
RNF43Q68DV7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
RNF43Q68DV7 MIR9-2-201ENST00000384838 87 ntBASIC1.86□□□□□ -2.11
RNF43Q68DV7 SNORA67.5-201ENST00000391036 107 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms