Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 Y_RNA.30-201ENST00000362572 97 ntBASIC2.38□□□□□ -2.03
PRPF38BQ5VTL8 RNA5SP37-201ENST00000365420 130 ntBASIC2.38□□□□□ -2.03
PRPF38BQ5VTL8 DEFA7P-201ENST00000382676 285 ntBASIC2.38□□□□□ -2.03
PRPF38BQ5VTL8 SNORD30.1-201ENST00000391309 70 ntBASIC2.38□□□□□ -2.03
PRPF38BQ5VTL8 YWHAEP2-201ENST00000580066 112 ntBASIC2.38□□□□□ -2.03
PRPF38BQ5VTL8 YWHAEP3-201ENST00000582767 121 ntBASIC2.38□□□□□ -2.03
PRPF38BQ5VTL8 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.38□□□□□ -2.03
PRPF38BQ5VTL8 RNU6-1241P-201ENST00000384536 107 ntBASIC2.37□□□□□ -2.03
PRPF38BQ5VTL8 RNU7-185P-201ENST00000459215 60 ntBASIC2.37□□□□□ -2.03
PRPF38BQ5VTL8 RNU6-1194P-201ENST00000516208 104 ntBASIC2.37□□□□□ -2.03
PRPF38BQ5VTL8 AC013244.2-201ENST00000603396 103 ntBASIC2.37□□□□□ -2.03
PRPF38BQ5VTL8 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.37□□□□□ -2.03
PRPF38BQ5VTL8 RNU6-330P-201ENST00000363015 107 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 SNORD115-31-201ENST00000365318 82 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 RNU6-800P-201ENST00000384473 103 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 SNORA67.5-201ENST00000391036 107 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 SNORD100-201ENST00000408573 76 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 SNORD83.1-201ENST00000411362 77 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 SNORA25.15-201ENST00000516487 89 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 MIR4285-201ENST00000581001 85 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 RNU7-10P-201ENST00000607194 63 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 AL627230.6-201ENST00000611129 280 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 U6.111-201ENST00000636093 83 ntBASIC2.36□□□□□ -2.03
PRPF38BQ5VTL8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PRPF38BQ5VTL8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PRPF38BQ5VTL8 HMGN2P19-201ENST00000425149 265 ntBASIC2.35□□□□□ -2.03
PRPF38BQ5VTL8 snoU13.21-201ENST00000459368 105 ntBASIC2.35□□□□□ -2.03
PRPF38BQ5VTL8 RNA5SP200-201ENST00000516360 103 ntBASIC2.35□□□□□ -2.03
PRPF38BQ5VTL8 MIR548H5-201ENST00000580314 60 ntBASIC2.35□□□□□ -2.03
PRPF38BQ5VTL8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
PRPF38BQ5VTL8 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
PRPF38BQ5VTL8 Y_RNA.536-201ENST00000384621 113 ntBASIC2.34□□□□□ -2.03
PRPF38BQ5VTL8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PRPF38BQ5VTL8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.34□□□□□ -2.03
PRPF38BQ5VTL8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PRPF38BQ5VTL8 Y_RNA.13-201ENST00000362403 112 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 RNU6-934P-201ENST00000365154 107 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 RNU6-1051P-201ENST00000365471 102 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 MIR598-201ENST00000384868 97 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 MIR154-201ENST00000385243 84 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 AL356379.1-201ENST00000414105 126 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 AL606490.4-201ENST00000423117 127 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 RNU7-95P-201ENST00000459222 64 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 TRAJ51-201ENST00000504127 63 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 RNA5SP102-201ENST00000516865 106 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 RNU6-165P-201ENST00000517170 99 ntBASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PRPF38BQ5VTL8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 SNORD113.3-201ENST00000364630 78 ntBASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 SNORA8.1-201ENST00000384250 140 ntBASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 RNU6-154P-201ENST00000384306 106 ntBASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 RNA5SP181-201ENST00000410246 98 ntBASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 RNU7-195P-201ENST00000458793 62 ntBASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 MIR514B-201ENST00000516774 80 ntBASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 AL512310.8-201ENST00000550183 120 ntBASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 MIR6082-201ENST00000613604 109 ntBASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRPF38BQ5VTL8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
PRPF38BQ5VTL8 Y_RNA.42-201ENST00000362660 108 ntBASIC2.31□□□□□ -2.04
PRPF38BQ5VTL8 Y_RNA.207-201ENST00000364142 106 ntBASIC2.31□□□□□ -2.04
PRPF38BQ5VTL8 RNU6-663P-201ENST00000391105 106 ntBASIC2.31□□□□□ -2.04
PRPF38BQ5VTL8 MIR942-201ENST00000401111 86 ntBASIC2.31□□□□□ -2.04
PRPF38BQ5VTL8 AC048334.1-201ENST00000477975 159 ntBASIC2.31□□□□□ -2.04
PRPF38BQ5VTL8 MIR4771-2-201ENST00000577758 74 ntBASIC2.31□□□□□ -2.04
PRPF38BQ5VTL8 MIR4303-201ENST00000581299 66 ntBASIC2.31□□□□□ -2.04
PRPF38BQ5VTL8 MIR4771-1-201ENST00000582617 74 ntBASIC2.31□□□□□ -2.04
PRPF38BQ5VTL8 RNU6-471P-201ENST00000383944 106 ntBASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 RNU6-291P-201ENST00000384720 107 ntBASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 RNU1-123P-201ENST00000458950 160 ntBASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 RN7SKP88-201ENST00000516847 250 ntBASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 RNU7-156P-201ENST00000517214 74 ntBASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 7SK.8-201ENST00000612110 250 ntBASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 7SK.11-201ENST00000615477 250 ntBASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 TRDV1-202ENST00000621643 102 ntBASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 7SK.13-201ENST00000622040 250 ntBASIC2.3□□□□□ -2.04
PRPF38BQ5VTL8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 RNU6-340P-201ENST00000364005 107 ntBASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 SNORD114-22-201ENST00000365423 72 ntBASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 Y_RNA.371-201ENST00000365591 113 ntBASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 MIR519A1-201ENST00000385257 85 ntBASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 MIR676-201ENST00000390702 67 ntBASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 Y_RNA.809-201ENST00000516058 95 ntBASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 ZNF209P-201ENST00000593450 2304 ntBASIC2.29□□□□□ -2.04
PRPF38BQ5VTL8 Y_RNA.56-201ENST00000362798 112 ntBASIC2.28□□□□□ -2.04
PRPF38BQ5VTL8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PRPF38BQ5VTL8 MIR2113-201ENST00000459007 91 ntBASIC2.27□□□□□ -2.05
PRPF38BQ5VTL8 Y_RNA.697-201ENST00000516776 113 ntBASIC2.27□□□□□ -2.05
PRPF38BQ5VTL8 MIR3198-2-201ENST00000577868 80 ntBASIC2.27□□□□□ -2.05
PRPF38BQ5VTL8 MIR3140-201ENST00000583685 90 ntBASIC2.27□□□□□ -2.05
PRPF38BQ5VTL8 AL096840.1-201ENST00000603287 93 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms