Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC138869.1-201ENST00000568623 124 ntBASIC0.88□□□□□ -2.27
KHDC1Q4VXA5 MIR4439-201ENST00000583746 80 ntBASIC0.88□□□□□ -2.27
KHDC1Q4VXA5 MIR7111-201ENST00000619751 72 ntBASIC0.88□□□□□ -2.27
KHDC1Q4VXA5 Y_RNA.32-201ENST00000362589 110 ntBASIC0.87□□□□□ -2.27
KHDC1Q4VXA5 RNU6-170P-201ENST00000362832 104 ntBASIC0.87□□□□□ -2.27
KHDC1Q4VXA5 Y_RNA.342-201ENST00000365352 113 ntBASIC0.87□□□□□ -2.27
KHDC1Q4VXA5 RNU6-44P-201ENST00000384045 107 ntBASIC0.87□□□□□ -2.27
KHDC1Q4VXA5 Y_RNA.567-201ENST00000384736 106 ntBASIC0.87□□□□□ -2.27
KHDC1Q4VXA5 AC092628.1-201ENST00000436250 252 ntBASIC0.87□□□□□ -2.27
KHDC1Q4VXA5 Y_RNA.659-201ENST00000515994 113 ntBASIC0.87□□□□□ -2.27
KHDC1Q4VXA5 RNA5SP220-201ENST00000516298 104 ntBASIC0.87□□□□□ -2.27
KHDC1Q4VXA5 MIR18A-201ENST00000362310 71 ntBASIC0.86□□□□□ -2.27
KHDC1Q4VXA5 RNU6-766P-201ENST00000362478 107 ntBASIC0.86□□□□□ -2.27
KHDC1Q4VXA5 RNU6-1163P-201ENST00000364516 107 ntBASIC0.86□□□□□ -2.27
KHDC1Q4VXA5 RNU6-756P-201ENST00000383997 107 ntBASIC0.86□□□□□ -2.27
KHDC1Q4VXA5 RNU6-110P-201ENST00000384508 104 ntBASIC0.86□□□□□ -2.27
KHDC1Q4VXA5 AL031737.1-201ENST00000450125 223 ntBASIC0.86□□□□□ -2.27
KHDC1Q4VXA5 TRAJ51-201ENST00000504127 63 ntBASIC0.86□□□□□ -2.27
KHDC1Q4VXA5 RNU6-135P-201ENST00000516769 101 ntBASIC0.86□□□□□ -2.27
KHDC1Q4VXA5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.86□□□□□ -2.27
KHDC1Q4VXA5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 RNA5SP245-201ENST00000364239 121 ntBASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 MIR519A1-201ENST00000385257 85 ntBASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 SNORA19.1-201ENST00000410656 129 ntBASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 RNA5SP222-201ENST00000411039 105 ntBASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 SCARNA23-201ENST00000516060 130 ntBASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 RNU6-537P-201ENST00000517277 103 ntBASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 MIR6734-201ENST00000621166 68 ntBASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
KHDC1Q4VXA5 Y_RNA.95-201ENST00000363079 95 ntBASIC0.84□□□□□ -2.27
KHDC1Q4VXA5 RNU6-42P-201ENST00000384165 107 ntBASIC0.84□□□□□ -2.27
KHDC1Q4VXA5 MIR590-201ENST00000385008 97 ntBASIC0.84□□□□□ -2.27
KHDC1Q4VXA5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
KHDC1Q4VXA5 SNORD63B-201ENST00000411005 70 ntBASIC0.84□□□□□ -2.27
KHDC1Q4VXA5 AC109327.2-201ENST00000448339 378 ntBASIC0.84□□□□□ -2.27
KHDC1Q4VXA5 RPS29P1-201ENST00000465274 159 ntBASIC0.84□□□□□ -2.27
KHDC1Q4VXA5 RNU6-469P-201ENST00000516253 101 ntBASIC0.84□□□□□ -2.27
KHDC1Q4VXA5 MIR3678-201ENST00000578455 94 ntBASIC0.84□□□□□ -2.27
KHDC1Q4VXA5 SNORA63.4-201ENST00000362763 126 ntBASIC0.83□□□□□ -2.28
KHDC1Q4VXA5 MIR644A-201ENST00000385262 94 ntBASIC0.83□□□□□ -2.28
KHDC1Q4VXA5 AC244505.6-201ENST00000452829 130 ntBASIC0.83□□□□□ -2.28
KHDC1Q4VXA5 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
KHDC1Q4VXA5 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
KHDC1Q4VXA5 Y_RNA.818-201ENST00000618813 71 ntBASIC0.83□□□□□ -2.28
KHDC1Q4VXA5 RNU6-1125P-201ENST00000363601 107 ntBASIC0.82□□□□□ -2.28
KHDC1Q4VXA5 RNU6-480P-201ENST00000384332 107 ntBASIC0.82□□□□□ -2.28
KHDC1Q4VXA5 RNU7-106P-201ENST00000459514 67 ntBASIC0.82□□□□□ -2.28
KHDC1Q4VXA5 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
KHDC1Q4VXA5 MIR151B-201ENST00000584249 96 ntBASIC0.82□□□□□ -2.28
KHDC1Q4VXA5 RNU6-86P-201ENST00000606534 107 ntBASIC0.82□□□□□ -2.28
KHDC1Q4VXA5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.82□□□□□ -2.28
KHDC1Q4VXA5 Y_RNA.57-201ENST00000362806 113 ntBASIC0.81□□□□□ -2.28
KHDC1Q4VXA5 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
KHDC1Q4VXA5 AC091304.10-201ENST00000641554 121 ntBASIC0.81□□□□□ -2.28
KHDC1Q4VXA5 MIR450A1-201ENST00000362262 91 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 Y_RNA.81-201ENST00000362997 102 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 Y_RNA.544-201ENST00000384650 113 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 MIR516A2-201ENST00000384888 90 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 MIR489-201ENST00000384923 84 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 MIR516A1-201ENST00000385033 90 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 RNU6-1254P-201ENST00000391266 104 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 AC097635.1-201ENST00000450678 155 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 Y_RNA.809-201ENST00000516058 95 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 MIR4777-201ENST00000583710 86 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 AC012531.4-201ENST00000616509 177 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 MIR6788-201ENST00000618842 66 ntBASIC0.8□□□□□ -2.28
KHDC1Q4VXA5 Y_RNA.93-201ENST00000363066 109 ntBASIC0.79□□□□□ -2.28
KHDC1Q4VXA5 RNU6-1244P-201ENST00000363614 108 ntBASIC0.79□□□□□ -2.28
KHDC1Q4VXA5 RNU6-813P-201ENST00000384691 107 ntBASIC0.79□□□□□ -2.28
KHDC1Q4VXA5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
KHDC1Q4VXA5 RNU7-195P-201ENST00000458793 62 ntBASIC0.79□□□□□ -2.28
KHDC1Q4VXA5 RNU6-795P-201ENST00000516323 103 ntBASIC0.79□□□□□ -2.28
KHDC1Q4VXA5 RNU6-1260P-201ENST00000362944 107 ntBASIC0.78□□□□□ -2.28
KHDC1Q4VXA5 Y_RNA.96-201ENST00000363092 109 ntBASIC0.78□□□□□ -2.28
KHDC1Q4VXA5 SNORD18A-201ENST00000363753 72 ntBASIC0.78□□□□□ -2.28
KHDC1Q4VXA5 RNU6-147P-201ENST00000383983 107 ntBASIC0.78□□□□□ -2.28
KHDC1Q4VXA5 SNORA36.2-201ENST00000384004 127 ntBASIC0.78□□□□□ -2.28
KHDC1Q4VXA5 MIR599-201ENST00000385069 95 ntBASIC0.78□□□□□ -2.28
KHDC1Q4VXA5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.78□□□□□ -2.28
KHDC1Q4VXA5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.78□□□□□ -2.28
KHDC1Q4VXA5 MIR4639-201ENST00000584938 69 ntBASIC0.78□□□□□ -2.28
KHDC1Q4VXA5 SNORD36A-201ENST00000362874 73 ntBASIC0.77□□□□□ -2.29
KHDC1Q4VXA5 Y_RNA.466-201ENST00000384294 113 ntBASIC0.77□□□□□ -2.29
KHDC1Q4VXA5 SNORD28-201ENST00000384706 75 ntBASIC0.77□□□□□ -2.29
KHDC1Q4VXA5 MIR181B2-201ENST00000385004 89 ntBASIC0.77□□□□□ -2.29
KHDC1Q4VXA5 RNU6-243P-201ENST00000391140 107 ntBASIC0.77□□□□□ -2.29
KHDC1Q4VXA5 RNU6-109P-201ENST00000516364 107 ntBASIC0.77□□□□□ -2.29
KHDC1Q4VXA5 RNU6-184P-201ENST00000516514 107 ntBASIC0.77□□□□□ -2.29
KHDC1Q4VXA5 RNU6-1229P-201ENST00000364295 107 ntBASIC0.76□□□□□ -2.29
KHDC1Q4VXA5 Y_RNA.467-201ENST00000384297 102 ntBASIC0.76□□□□□ -2.29
KHDC1Q4VXA5 MIR140-201ENST00000385282 100 ntBASIC0.76□□□□□ -2.29
KHDC1Q4VXA5 MIR548J-201ENST00000408833 112 ntBASIC0.76□□□□□ -2.29
KHDC1Q4VXA5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.76□□□□□ -2.29
KHDC1Q4VXA5 CYP3A137P-201ENST00000562436 69 ntBASIC0.76□□□□□ -2.29
KHDC1Q4VXA5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.76□□□□□ -2.29
KHDC1Q4VXA5 Y_RNA.107-201ENST00000363190 121 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms