Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SNORD111-201ENST00000408139 94 ntBASIC0.82□□□□□ -2.28
LMO4P61968 MIR1285-1-201ENST00000408593 84 ntBASIC0.82□□□□□ -2.28
LMO4P61968 MIR1302-4-201ENST00000408701 150 ntBASIC0.82□□□□□ -2.28
LMO4P61968 Y_RNA.593-201ENST00000410292 98 ntBASIC0.82□□□□□ -2.28
LMO4P61968 RNU4-83P-201ENST00000410863 133 ntBASIC0.82□□□□□ -2.28
LMO4P61968 RNU7-90P-201ENST00000459216 62 ntBASIC0.82□□□□□ -2.28
LMO4P61968 OR2A41P-201ENST00000473586 105 ntBASIC0.82□□□□□ -2.28
LMO4P61968 RNU6-850P-201ENST00000516934 103 ntBASIC0.82□□□□□ -2.28
LMO4P61968 AC062037.1-201ENST00000605302 128 ntBASIC0.82□□□□□ -2.28
LMO4P61968 MIR8066-201ENST00000617280 78 ntBASIC0.82□□□□□ -2.28
LMO4P61968 AC025521.1-201ENST00000621624 286 ntBASIC0.82□□□□□ -2.28
LMO4P61968 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.82□□□□□ -2.28
LMO4P61968 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
LMO4P61968 RNU6-571P-201ENST00000384128 107 ntBASIC0.81□□□□□ -2.28
LMO4P61968 MIR181B2-201ENST00000385004 89 ntBASIC0.81□□□□□ -2.28
LMO4P61968 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
LMO4P61968 SNORA72.7-201ENST00000516349 94 ntBASIC0.81□□□□□ -2.28
LMO4P61968 AL513043.2-201ENST00000573941 143 ntBASIC0.81□□□□□ -2.28
LMO4P61968 MIR6788-201ENST00000618842 66 ntBASIC0.81□□□□□ -2.28
LMO4P61968 Y_RNA.13-201ENST00000362403 112 ntBASIC0.8□□□□□ -2.28
LMO4P61968 Y_RNA.17-201ENST00000362433 111 ntBASIC0.8□□□□□ -2.28
LMO4P61968 RNU4-58P-201ENST00000363192 141 ntBASIC0.8□□□□□ -2.28
LMO4P61968 MIR125B2-201ENST00000385128 89 ntBASIC0.8□□□□□ -2.28
LMO4P61968 MIR548J-201ENST00000408833 112 ntBASIC0.8□□□□□ -2.28
LMO4P61968 RNY4P29-201ENST00000410801 97 ntBASIC0.8□□□□□ -2.28
LMO4P61968 RPS26P5-201ENST00000418544 335 ntBASIC0.8□□□□□ -2.28
LMO4P61968 AC002429.1-201ENST00000437672 148 ntBASIC0.8□□□□□ -2.28
LMO4P61968 MIR4676-201ENST00000583078 72 ntBASIC0.8□□□□□ -2.28
LMO4P61968 MIR6082-201ENST00000613604 109 ntBASIC0.8□□□□□ -2.28
LMO4P61968 MIR6734-201ENST00000621166 68 ntBASIC0.8□□□□□ -2.28
LMO4P61968 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LMO4P61968 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LMO4P61968 Y_RNA.42-201ENST00000362660 108 ntBASIC0.79□□□□□ -2.28
LMO4P61968 Y_RNA.57-201ENST00000362806 113 ntBASIC0.79□□□□□ -2.28
LMO4P61968 RNU6-1125P-201ENST00000363601 107 ntBASIC0.79□□□□□ -2.28
LMO4P61968 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
LMO4P61968 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
LMO4P61968 Y_RNA.388-201ENST00000383919 113 ntBASIC0.79□□□□□ -2.28
LMO4P61968 RNU6-480P-201ENST00000384332 107 ntBASIC0.79□□□□□ -2.28
LMO4P61968 SNORA26.2-201ENST00000390922 122 ntBASIC0.79□□□□□ -2.28
LMO4P61968 RNU6-994P-201ENST00000410507 111 ntBASIC0.79□□□□□ -2.28
LMO4P61968 RNU6-402P-201ENST00000410678 103 ntBASIC0.79□□□□□ -2.28
LMO4P61968 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.79□□□□□ -2.28
LMO4P61968 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
LMO4P61968 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
LMO4P61968 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
LMO4P61968 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
LMO4P61968 MIR494-201ENST00000349529 81 ntBASIC0.78□□□□□ -2.28
LMO4P61968 RNU6-219P-201ENST00000364728 107 ntBASIC0.78□□□□□ -2.28
LMO4P61968 MIR200A-201ENST00000384875 90 ntBASIC0.78□□□□□ -2.28
LMO4P61968 MIR450A2-201ENST00000385022 100 ntBASIC0.78□□□□□ -2.28
LMO4P61968 SNORD100-201ENST00000408573 76 ntBASIC0.78□□□□□ -2.28
LMO4P61968 Y_RNA.609-201ENST00000410669 89 ntBASIC0.78□□□□□ -2.28
LMO4P61968 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.78□□□□□ -2.28
LMO4P61968 RNU6-1194P-201ENST00000516208 104 ntBASIC0.78□□□□□ -2.28
LMO4P61968 RN7SKP12-201ENST00000516275 143 ntBASIC0.78□□□□□ -2.28
LMO4P61968 RNU6-267P-201ENST00000516714 103 ntBASIC0.78□□□□□ -2.28
LMO4P61968 RNU6-765P-201ENST00000516916 99 ntBASIC0.78□□□□□ -2.28
LMO4P61968 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
LMO4P61968 AC022709.1-201ENST00000615967 87 ntBASIC0.78□□□□□ -2.28
LMO4P61968 Y_RNA.73-201ENST00000362910 113 ntBASIC0.77□□□□□ -2.29
LMO4P61968 RNU6-675P-201ENST00000384236 104 ntBASIC0.77□□□□□ -2.29
LMO4P61968 SNORD116-22-201ENST00000384430 92 ntBASIC0.77□□□□□ -2.29
LMO4P61968 Y_RNA.620-201ENST00000411009 88 ntBASIC0.77□□□□□ -2.29
LMO4P61968 SNORD124-201ENST00000459577 104 ntBASIC0.77□□□□□ -2.29
LMO4P61968 RNU6-1223P-201ENST00000517124 104 ntBASIC0.77□□□□□ -2.29
LMO4P61968 RNU7-156P-201ENST00000517214 74 ntBASIC0.77□□□□□ -2.29
LMO4P61968 MIR4668-201ENST00000582284 70 ntBASIC0.77□□□□□ -2.29
LMO4P61968 MIR151B-201ENST00000584249 96 ntBASIC0.77□□□□□ -2.29
LMO4P61968 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.77□□□□□ -2.29
LMO4P61968 SNORD92-201ENST00000585078 85 ntBASIC0.77□□□□□ -2.29
LMO4P61968 AC008608.1-201ENST00000603910 127 ntBASIC0.77□□□□□ -2.29
LMO4P61968 RNY1P4-201ENST00000384595 115 ntBASIC0.76□□□□□ -2.29
LMO4P61968 MIR516A2-201ENST00000384888 90 ntBASIC0.76□□□□□ -2.29
LMO4P61968 MIR516A1-201ENST00000385033 90 ntBASIC0.76□□□□□ -2.29
LMO4P61968 MIR100-201ENST00000385259 80 ntBASIC0.76□□□□□ -2.29
LMO4P61968 MIR942-201ENST00000401111 86 ntBASIC0.76□□□□□ -2.29
LMO4P61968 MIR938-201ENST00000401216 83 ntBASIC0.76□□□□□ -2.29
LMO4P61968 SNORD63B-201ENST00000411005 70 ntBASIC0.76□□□□□ -2.29
LMO4P61968 RNU7-106P-201ENST00000459514 67 ntBASIC0.76□□□□□ -2.29
LMO4P61968 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.76□□□□□ -2.29
LMO4P61968 MIR4804-201ENST00000581683 73 ntBASIC0.76□□□□□ -2.29
LMO4P61968 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.76□□□□□ -2.29
LMO4P61968 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
LMO4P61968 MIR101-2-201ENST00000362195 79 ntBASIC0.75□□□□□ -2.29
LMO4P61968 RNU6-820P-201ENST00000384273 107 ntBASIC0.75□□□□□ -2.29
LMO4P61968 RNU6-364P-201ENST00000384387 107 ntBASIC0.75□□□□□ -2.29
LMO4P61968 Y_RNA.536-201ENST00000384621 113 ntBASIC0.75□□□□□ -2.29
LMO4P61968 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.75□□□□□ -2.29
LMO4P61968 MIR1827-201ENST00000408549 66 ntBASIC0.75□□□□□ -2.29
LMO4P61968 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.75□□□□□ -2.29
LMO4P61968 RNU6-592P-201ENST00000411333 103 ntBASIC0.75□□□□□ -2.29
LMO4P61968 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.75□□□□□ -2.29
LMO4P61968 RNU7-102P-201ENST00000458948 62 ntBASIC0.75□□□□□ -2.29
LMO4P61968 TRAJ51-201ENST00000504127 63 ntBASIC0.75□□□□□ -2.29
LMO4P61968 RNU6-977P-201ENST00000516411 103 ntBASIC0.75□□□□□ -2.29
LMO4P61968 Y_RNA.697-201ENST00000516776 113 ntBASIC0.75□□□□□ -2.29
LMO4P61968 MIR1-1-201ENST00000362147 71 ntBASIC0.74□□□□□ -2.29
LMO4P61968 Y_RNA.56-201ENST00000362798 112 ntBASIC0.74□□□□□ -2.29
LMO4P61968 SNORD36A-201ENST00000362874 73 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 273.2 ms