Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 MIR4639-201ENST00000584938 69 ntBASIC0.41□□□□□ -2.34
LBX1P52954 Y_RNA.773-201ENST00000607168 90 ntBASIC0.41□□□□□ -2.34
LBX1P52954 AC092634.7-201ENST00000621022 103 ntBASIC0.41□□□□□ -2.34
LBX1P52954 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.4□□□□□ -2.34
LBX1P52954 Y_RNA.56-201ENST00000362798 112 ntBASIC0.4□□□□□ -2.35
LBX1P52954 SNORD50.2-201ENST00000365465 70 ntBASIC0.4□□□□□ -2.35
LBX1P52954 Y_RNA.586-201ENST00000391146 98 ntBASIC0.4□□□□□ -2.35
LBX1P52954 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.4□□□□□ -2.35
LBX1P52954 RNU5E-3P-201ENST00000515913 68 ntBASIC0.4□□□□□ -2.35
LBX1P52954 SCARNA16.5-201ENST00000517114 183 ntBASIC0.4□□□□□ -2.35
LBX1P52954 TUG1_4.1-201ENST00000619464 181 ntBASIC0.4□□□□□ -2.35
LBX1P52954 AP001362.1-201ENST00000625165 124 ntBASIC0.4□□□□□ -2.35
LBX1P52954 SNORA63.5-201ENST00000363548 123 ntBASIC0.39□□□□□ -2.35
LBX1P52954 Y_RNA.495-201ENST00000384435 112 ntBASIC0.39□□□□□ -2.35
LBX1P52954 SNORD28-201ENST00000384706 75 ntBASIC0.39□□□□□ -2.35
LBX1P52954 MIR601-201ENST00000385256 79 ntBASIC0.39□□□□□ -2.35
LBX1P52954 MIR519A1-201ENST00000385257 85 ntBASIC0.39□□□□□ -2.35
LBX1P52954 SNORA40-201ENST00000388090 126 ntBASIC0.39□□□□□ -2.35
LBX1P52954 SNORA40.8-201ENST00000411034 126 ntBASIC0.39□□□□□ -2.35
LBX1P52954 AL353813.1-201ENST00000440700 253 ntBASIC0.39□□□□□ -2.35
LBX1P52954 RNA5SP134-201ENST00000516492 96 ntBASIC0.39□□□□□ -2.35
LBX1P52954 MIR376B-201ENST00000614515 100 ntBASIC0.39□□□□□ -2.35
LBX1P52954 Y_RNA.213-201ENST00000364178 111 ntBASIC0.38□□□□□ -2.35
LBX1P52954 Y_RNA.567-201ENST00000384736 106 ntBASIC0.38□□□□□ -2.35
LBX1P52954 RNU6-679P-201ENST00000391003 106 ntBASIC0.38□□□□□ -2.35
LBX1P52954 RNU6-772P-201ENST00000516042 105 ntBASIC0.38□□□□□ -2.35
LBX1P52954 MIR7107-201ENST00000611489 80 ntBASIC0.38□□□□□ -2.35
LBX1P52954 Y_RNA.328-201ENST00000365208 113 ntBASIC0.37□□□□□ -2.35
LBX1P52954 Y_RNA.343-201ENST00000365354 112 ntBASIC0.37□□□□□ -2.35
LBX1P52954 RNU6-1062P-201ENST00000383908 107 ntBASIC0.37□□□□□ -2.35
LBX1P52954 MIR548D2-201ENST00000384955 97 ntBASIC0.37□□□□□ -2.35
LBX1P52954 RPS29P8-201ENST00000445109 171 ntBASIC0.37□□□□□ -2.35
LBX1P52954 Y_RNA.703-201ENST00000516846 111 ntBASIC0.37□□□□□ -2.35
LBX1P52954 RNU6-1006P-201ENST00000516998 103 ntBASIC0.37□□□□□ -2.35
LBX1P52954 SNORA25.18-201ENST00000607153 114 ntBASIC0.37□□□□□ -2.35
LBX1P52954 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.37□□□□□ -2.35
LBX1P52954 MIR1255B1-201ENST00000636325 63 ntBASIC0.37□□□□□ -2.35
LBX1P52954 RNU6-235P-201ENST00000362644 107 ntBASIC0.36□□□□□ -2.35
LBX1P52954 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
LBX1P52954 RNU6-469P-201ENST00000516253 101 ntBASIC0.36□□□□□ -2.35
LBX1P52954 DEFB131E-201ENST00000532329 154 ntBASIC0.36□□□□□ -2.35
LBX1P52954 Y_RNA.98-201ENST00000363109 102 ntBASIC0.35□□□□□ -2.35
LBX1P52954 SNORD49B-201ENST00000365172 72 ntBASIC0.35□□□□□ -2.35
LBX1P52954 Y_RNA.528-201ENST00000384575 108 ntBASIC0.35□□□□□ -2.35
LBX1P52954 AC108740.1-201ENST00000498629 225 ntBASIC0.35□□□□□ -2.35
LBX1P52954 RNU6-863P-201ENST00000515989 104 ntBASIC0.35□□□□□ -2.35
LBX1P52954 RNU7-6P-201ENST00000516845 62 ntBASIC0.35□□□□□ -2.35
LBX1P52954 Y_RNA.712-201ENST00000517011 92 ntBASIC0.35□□□□□ -2.35
LBX1P52954 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
LBX1P52954 RNA5SP403-201ENST00000363598 108 ntBASIC0.34□□□□□ -2.36
LBX1P52954 Y_RNA.344-201ENST00000365381 112 ntBASIC0.34□□□□□ -2.36
LBX1P52954 RNU6-746P-201ENST00000384112 109 ntBASIC0.34□□□□□ -2.36
LBX1P52954 Y_RNA.468-201ENST00000384298 102 ntBASIC0.34□□□□□ -2.36
LBX1P52954 MIR34C-201ENST00000384831 77 ntBASIC0.34□□□□□ -2.36
LBX1P52954 MIR1263-201ENST00000408324 86 ntBASIC0.34□□□□□ -2.36
LBX1P52954 Y_RNA.630-201ENST00000411370 108 ntBASIC0.34□□□□□ -2.36
LBX1P52954 RNA5SP268-201ENST00000516828 124 ntBASIC0.34□□□□□ -2.36
LBX1P52954 MIR548H5-201ENST00000580314 60 ntBASIC0.34□□□□□ -2.36
LBX1P52954 RNU1-29P-201ENST00000606574 126 ntBASIC0.34□□□□□ -2.36
LBX1P52954 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.34□□□□□ -2.36
LBX1P52954 AC244669.1-204ENST00000621564 178 ntBASIC0.34□□□□□ -2.36
LBX1P52954 Y_RNA.218-201ENST00000364218 104 ntBASIC0.33□□□□□ -2.36
LBX1P52954 Y_RNA.360-201ENST00000365512 102 ntBASIC0.33□□□□□ -2.36
LBX1P52954 Y_RNA.514-201ENST00000384528 112 ntBASIC0.33□□□□□ -2.36
LBX1P52954 MIR548I2-201ENST00000408348 149 ntBASIC0.33□□□□□ -2.36
LBX1P52954 SNORD71-201ENST00000411292 86 ntBASIC0.33□□□□□ -2.36
LBX1P52954 AC097635.1-201ENST00000450678 155 ntBASIC0.33□□□□□ -2.36
LBX1P52954 TRAJ51-201ENST00000504127 63 ntBASIC0.33□□□□□ -2.36
LBX1P52954 RNU6-521P-201ENST00000516663 105 ntBASIC0.33□□□□□ -2.36
LBX1P52954 RNU7-161P-201ENST00000517289 62 ntBASIC0.33□□□□□ -2.36
LBX1P52954 AC138869.1-201ENST00000568623 124 ntBASIC0.33□□□□□ -2.36
LBX1P52954 AC025166.1-201ENST00000612411 163 ntBASIC0.33□□□□□ -2.36
LBX1P52954 MIR3914-2-201ENST00000637339 95 ntBASIC0.33□□□□□ -2.36
LBX1P52954 MIR371B-201ENST00000638082 66 ntBASIC0.33□□□□□ -2.36
LBX1P52954 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.33□□□□□ -2.36
LBX1P52954 MTND5P18-201ENST00000445624 1801 ntBASIC0.33□□□□□ -2.36
LBX1P52954 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
LBX1P52954 MIR101-2-201ENST00000362195 79 ntBASIC0.32□□□□□ -2.36
LBX1P52954 RNU6-1313P-201ENST00000362622 102 ntBASIC0.32□□□□□ -2.36
LBX1P52954 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
LBX1P52954 MIR539-201ENST00000365690 78 ntBASIC0.32□□□□□ -2.36
LBX1P52954 Y_RNA.413-201ENST00000384007 102 ntBASIC0.32□□□□□ -2.36
LBX1P52954 RNU6-571P-201ENST00000384128 107 ntBASIC0.32□□□□□ -2.36
LBX1P52954 RNU6-1184P-201ENST00000384588 108 ntBASIC0.32□□□□□ -2.36
LBX1P52954 RNU6-1064P-201ENST00000410626 104 ntBASIC0.32□□□□□ -2.36
LBX1P52954 SUMO1P3-201ENST00000439961 304 ntBASIC0.32□□□□□ -2.36
LBX1P52954 Y_RNA.754-201ENST00000476024 102 ntBASIC0.32□□□□□ -2.36
LBX1P52954 MIR3133-201ENST00000583157 78 ntBASIC0.32□□□□□ -2.36
LBX1P52954 Y_RNA.790-201ENST00000614282 102 ntBASIC0.32□□□□□ -2.36
LBX1P52954 Y_RNA.782-201ENST00000614695 102 ntBASIC0.32□□□□□ -2.36
LBX1P52954 MIR6755-201ENST00000619993 66 ntBASIC0.32□□□□□ -2.36
LBX1P52954 AC091304.10-201ENST00000641554 121 ntBASIC0.32□□□□□ -2.36
LBX1P52954 RNU6-865P-201ENST00000364772 107 ntBASIC0.31□□□□□ -2.36
LBX1P52954 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.31□□□□□ -2.36
LBX1P52954 RNU7-107P-201ENST00000459121 61 ntBASIC0.31□□□□□ -2.36
LBX1P52954 RNU6-971P-201ENST00000516920 106 ntBASIC0.31□□□□□ -2.36
LBX1P52954 MIR4768-201ENST00000585270 74 ntBASIC0.31□□□□□ -2.36
LBX1P52954 RNU7-10P-201ENST00000607194 63 ntBASIC0.31□□□□□ -2.36
LBX1P52954 RNU6-363P-201ENST00000362895 105 ntBASIC0.3□□□□□ -2.36
LBX1P52954 RNU6-704P-201ENST00000364162 103 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms