Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC062037.1-201ENST00000605302 128 ntBASIC1.44□□□□□ -2.18
MRE11P49959 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
MRE11P49959 MIR26B-201ENST00000362251 77 ntBASIC1.43□□□□□ -2.18
MRE11P49959 Y_RNA.17-201ENST00000362433 111 ntBASIC1.43□□□□□ -2.18
MRE11P49959 RNU6-910P-201ENST00000390844 107 ntBASIC1.43□□□□□ -2.18
MRE11P49959 SNORA26.2-201ENST00000390922 122 ntBASIC1.43□□□□□ -2.18
MRE11P49959 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.43□□□□□ -2.18
MRE11P49959 MIR1285-1-201ENST00000408593 84 ntBASIC1.43□□□□□ -2.18
MRE11P49959 Y_RNA.593-201ENST00000410292 98 ntBASIC1.43□□□□□ -2.18
MRE11P49959 SNORD83.1-201ENST00000411362 77 ntBASIC1.43□□□□□ -2.18
MRE11P49959 RNU7-21P-201ENST00000459430 62 ntBASIC1.43□□□□□ -2.18
MRE11P49959 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.43□□□□□ -2.18
MRE11P49959 AC020891.4-201ENST00000605745 93 ntBASIC1.43□□□□□ -2.18
MRE11P49959 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.43□□□□□ -2.18
MRE11P49959 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.43□□□□□ -2.18
MRE11P49959 Y_RNA.388-201ENST00000383919 113 ntBASIC1.42□□□□□ -2.18
MRE11P49959 MIR450A2-201ENST00000385022 100 ntBASIC1.42□□□□□ -2.18
MRE11P49959 MIR618-201ENST00000385287 98 ntBASIC1.42□□□□□ -2.18
MRE11P49959 AL591704.2-201ENST00000421658 181 ntBASIC1.42□□□□□ -2.18
MRE11P49959 RNU7-185P-201ENST00000459215 60 ntBASIC1.42□□□□□ -2.18
MRE11P49959 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.42□□□□□ -2.18
MRE11P49959 SNORA25.16-201ENST00000516741 121 ntBASIC1.42□□□□□ -2.18
MRE11P49959 AC106800.4-201ENST00000614905 153 ntBASIC1.42□□□□□ -2.18
MRE11P49959 AC023934.1-201ENST00000574529 2389 ntBASIC1.42□□□□□ -2.18
MRE11P49959 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
MRE11P49959 RNU6-1125P-201ENST00000363601 107 ntBASIC1.41□□□□□ -2.18
MRE11P49959 RNU6-480P-201ENST00000384332 107 ntBASIC1.41□□□□□ -2.18
MRE11P49959 SNORA80D-201ENST00000384488 135 ntBASIC1.41□□□□□ -2.18
MRE11P49959 MIR181B2-201ENST00000385004 89 ntBASIC1.41□□□□□ -2.18
MRE11P49959 SNORD111-201ENST00000408139 94 ntBASIC1.41□□□□□ -2.18
MRE11P49959 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.41□□□□□ -2.18
MRE11P49959 BX276092.1-201ENST00000427368 251 ntBASIC1.41□□□□□ -2.18
MRE11P49959 SNORD79.1-201ENST00000516069 84 ntBASIC1.41□□□□□ -2.18
MRE11P49959 RNU6-531P-201ENST00000516694 104 ntBASIC1.41□□□□□ -2.18
MRE11P49959 AC023827.1-201ENST00000569247 97 ntBASIC1.41□□□□□ -2.18
MRE11P49959 RNU6-403P-201ENST00000363163 104 ntBASIC1.4□□□□□ -2.19
MRE11P49959 RNU6-934P-201ENST00000365154 107 ntBASIC1.4□□□□□ -2.19
MRE11P49959 RNU6-571P-201ENST00000384128 107 ntBASIC1.4□□□□□ -2.19
MRE11P49959 MIR1257-201ENST00000408490 117 ntBASIC1.4□□□□□ -2.19
MRE11P49959 RNU4-83P-201ENST00000410863 133 ntBASIC1.4□□□□□ -2.19
MRE11P49959 RN7SKP12-201ENST00000516275 143 ntBASIC1.4□□□□□ -2.19
MRE11P49959 RNU6-850P-201ENST00000516934 103 ntBASIC1.4□□□□□ -2.19
MRE11P49959 AL513043.2-201ENST00000573941 143 ntBASIC1.4□□□□□ -2.19
MRE11P49959 AC025521.1-201ENST00000621624 286 ntBASIC1.4□□□□□ -2.19
MRE11P49959 RNU4-58P-201ENST00000363192 141 ntBASIC1.39□□□□□ -2.19
MRE11P49959 Y_RNA.258-201ENST00000364613 105 ntBASIC1.39□□□□□ -2.19
MRE11P49959 RNU6-820P-201ENST00000384273 107 ntBASIC1.39□□□□□ -2.19
MRE11P49959 SNORD116-22-201ENST00000384430 92 ntBASIC1.39□□□□□ -2.19
MRE11P49959 SNORA72.6-201ENST00000384520 129 ntBASIC1.39□□□□□ -2.19
MRE11P49959 AC015818.7-201ENST00000428754 109 ntBASIC1.39□□□□□ -2.19
MRE11P49959 AC087499.7-201ENST00000441958 109 ntBASIC1.39□□□□□ -2.19
MRE11P49959 MIR494-201ENST00000349529 81 ntBASIC1.38□□□□□ -2.19
MRE11P49959 RNU6-402P-201ENST00000410678 103 ntBASIC1.38□□□□□ -2.19
MRE11P49959 RNU7-90P-201ENST00000459216 62 ntBASIC1.38□□□□□ -2.19
MRE11P49959 MIR4771-2-201ENST00000577758 74 ntBASIC1.38□□□□□ -2.19
MRE11P49959 MIR4771-1-201ENST00000582617 74 ntBASIC1.38□□□□□ -2.19
MRE11P49959 Y_RNA.57-201ENST00000362806 113 ntBASIC1.37□□□□□ -2.19
MRE11P49959 RNU6-675P-201ENST00000384236 104 ntBASIC1.37□□□□□ -2.19
MRE11P49959 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
MRE11P49959 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
MRE11P49959 MIR8066-201ENST00000617280 78 ntBASIC1.37□□□□□ -2.19
MRE11P49959 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
MRE11P49959 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.37□□□□□ -2.19
MRE11P49959 Y_RNA.13-201ENST00000362403 112 ntBASIC1.36□□□□□ -2.19
MRE11P49959 RNU6-219P-201ENST00000364728 107 ntBASIC1.36□□□□□ -2.19
MRE11P49959 MIR125B2-201ENST00000385128 89 ntBASIC1.36□□□□□ -2.19
MRE11P49959 RPS26P5-201ENST00000418544 335 ntBASIC1.36□□□□□ -2.19
MRE11P49959 RNU6-1194P-201ENST00000516208 104 ntBASIC1.36□□□□□ -2.19
MRE11P49959 SNORA70.22-201ENST00000517160 124 ntBASIC1.36□□□□□ -2.19
MRE11P49959 MIR4668-201ENST00000582284 70 ntBASIC1.36□□□□□ -2.19
MRE11P49959 MIR6082-201ENST00000613604 109 ntBASIC1.36□□□□□ -2.19
MRE11P49959 Y_RNA.609-201ENST00000410669 89 ntBASIC1.35□□□□□ -2.19
MRE11P49959 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
MRE11P49959 RNU6-267P-201ENST00000516714 103 ntBASIC1.35□□□□□ -2.19
MRE11P49959 RNY1P1-201ENST00000364372 112 ntBASIC1.34□□□□□ -2.19
MRE11P49959 RNU6-716P-201ENST00000365621 103 ntBASIC1.34□□□□□ -2.19
MRE11P49959 SNORD12-201ENST00000391002 90 ntBASIC1.34□□□□□ -2.19
MRE11P49959 Y_RNA.620-201ENST00000411009 88 ntBASIC1.34□□□□□ -2.19
MRE11P49959 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.34□□□□□ -2.19
MRE11P49959 MIR4676-201ENST00000583078 72 ntBASIC1.34□□□□□ -2.19
MRE11P49959 AC013244.2-201ENST00000603396 103 ntBASIC1.34□□□□□ -2.19
MRE11P49959 IGLL4P-201ENST00000614590 133 ntBASIC1.34□□□□□ -2.19
MRE11P49959 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
MRE11P49959 RNU6-369P-201ENST00000362515 102 ntBASIC1.33□□□□□ -2.2
MRE11P49959 RNA5SP173-201ENST00000364857 136 ntBASIC1.33□□□□□ -2.2
MRE11P49959 RNU6-1152P-201ENST00000384576 107 ntBASIC1.33□□□□□ -2.2
MRE11P49959 RNU6-765P-201ENST00000516916 99 ntBASIC1.33□□□□□ -2.2
MRE11P49959 MIR8087-201ENST00000612745 78 ntBASIC1.33□□□□□ -2.2
MRE11P49959 Y_RNA.42-201ENST00000362660 108 ntBASIC1.32□□□□□ -2.2
MRE11P49959 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MRE11P49959 SNORD100-201ENST00000408573 76 ntBASIC1.32□□□□□ -2.2
MRE11P49959 RNU6-994P-201ENST00000410507 111 ntBASIC1.32□□□□□ -2.2
MRE11P49959 RNU6-592P-201ENST00000411333 103 ntBASIC1.32□□□□□ -2.2
MRE11P49959 RNU7-156P-201ENST00000517214 74 ntBASIC1.32□□□□□ -2.2
MRE11P49959 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
MRE11P49959 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.32□□□□□ -2.2
MRE11P49959 MIR101-2-201ENST00000362195 79 ntBASIC1.31□□□□□ -2.2
MRE11P49959 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
MRE11P49959 Y_RNA.73-201ENST00000362910 113 ntBASIC1.31□□□□□ -2.2
MRE11P49959 MIR516A2-201ENST00000384888 90 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms