Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SNORA64-201ENST00000384674 134 ntBASIC2.13□□□□□ -2.07
CHRNA4P43681 MTND4LP1-201ENST00000446263 157 ntBASIC2.13□□□□□ -2.07
CHRNA4P43681 RNU7-193P-201ENST00000516723 65 ntBASIC2.13□□□□□ -2.07
CHRNA4P43681 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
CHRNA4P43681 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
CHRNA4P43681 U1.36-201ENST00000620684 176 ntBASIC2.13□□□□□ -2.07
CHRNA4P43681 RNU6-668P-201ENST00000364180 107 ntBASIC2.12□□□□□ -2.07
CHRNA4P43681 RNA5SP192-201ENST00000364404 120 ntBASIC2.12□□□□□ -2.07
CHRNA4P43681 U3.27-201ENST00000391237 200 ntBASIC2.12□□□□□ -2.07
CHRNA4P43681 RN7SKP223-201ENST00000410582 62 ntBASIC2.12□□□□□ -2.07
CHRNA4P43681 Y_RNA.697-201ENST00000516776 113 ntBASIC2.12□□□□□ -2.07
CHRNA4P43681 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
CHRNA4P43681 RNU6-369P-201ENST00000362515 102 ntBASIC2.11□□□□□ -2.07
CHRNA4P43681 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
CHRNA4P43681 RNU6-580P-201ENST00000365159 107 ntBASIC2.11□□□□□ -2.07
CHRNA4P43681 SNORA48.3-201ENST00000391081 134 ntBASIC2.11□□□□□ -2.07
CHRNA4P43681 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
CHRNA4P43681 RNA5SP458-201ENST00000516188 119 ntBASIC2.11□□□□□ -2.07
CHRNA4P43681 MIR6516-201ENST00000630554 81 ntBASIC2.11□□□□□ -2.07
CHRNA4P43681 RNU6-936P-201ENST00000384005 107 ntBASIC2.1□□□□□ -2.07
CHRNA4P43681 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
CHRNA4P43681 AL161935.2-201ENST00000414627 60 ntBASIC2.1□□□□□ -2.07
CHRNA4P43681 RNU6-922P-201ENST00000516753 99 ntBASIC2.1□□□□□ -2.07
CHRNA4P43681 AP003716.2-201ENST00000528260 108 ntBASIC2.1□□□□□ -2.07
CHRNA4P43681 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
CHRNA4P43681 AL353997.5-201ENST00000618886 171 ntBASIC2.1□□□□□ -2.07
CHRNA4P43681 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHRNA4P43681 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CHRNA4P43681 AC080100.1-201ENST00000624239 5356 ntBASIC2.09□□□□□ -2.07
CHRNA4P43681 RNU6-1184P-201ENST00000384588 108 ntBASIC2.09□□□□□ -2.07
CHRNA4P43681 MIR599-201ENST00000385069 95 ntBASIC2.09□□□□□ -2.07
CHRNA4P43681 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.09□□□□□ -2.07
CHRNA4P43681 snoU13.25-201ENST00000458945 104 ntBASIC2.09□□□□□ -2.07
CHRNA4P43681 SCARNA21.1-201ENST00000515996 128 ntBASIC2.09□□□□□ -2.07
CHRNA4P43681 RNU6-765P-201ENST00000516916 99 ntBASIC2.09□□□□□ -2.07
CHRNA4P43681 Y_RNA.783-201ENST00000613546 102 ntBASIC2.09□□□□□ -2.07
CHRNA4P43681 MIR6082-201ENST00000613604 109 ntBASIC2.09□□□□□ -2.07
CHRNA4P43681 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CHRNA4P43681 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CHRNA4P43681 Y_RNA.13-201ENST00000362403 112 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 RNA5SP117-201ENST00000365294 118 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 RNU6-1335P-201ENST00000365426 107 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 RNA5SP259-201ENST00000365541 109 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 MIR513A1-201ENST00000385138 129 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 MIR764-201ENST00000390811 85 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CHRNA4P43681 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 AL078603.1-201ENST00000603824 313 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.08□□□□□ -2.08
CHRNA4P43681 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.07□□□□□ -2.08
CHRNA4P43681 SNORD75.2-201ENST00000408784 58 ntBASIC2.07□□□□□ -2.08
CHRNA4P43681 RNU6-250P-201ENST00000516958 103 ntBASIC2.07□□□□□ -2.08
CHRNA4P43681 RNU6-1057P-201ENST00000517162 102 ntBASIC2.07□□□□□ -2.08
CHRNA4P43681 AC138907.6-201ENST00000568401 126 ntBASIC2.07□□□□□ -2.08
CHRNA4P43681 AC138869.1-201ENST00000568623 124 ntBASIC2.07□□□□□ -2.08
CHRNA4P43681 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.07□□□□□ -2.08
CHRNA4P43681 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.07□□□□□ -2.08
CHRNA4P43681 AC103810.8-201ENST00000607347 118 ntBASIC2.07□□□□□ -2.08
CHRNA4P43681 AC073869.9-201ENST00000641610 120 ntBASIC2.07□□□□□ -2.08
CHRNA4P43681 SNORD114-1-201ENST00000362705 72 ntBASIC2.06□□□□□ -2.08
CHRNA4P43681 SNORD113-4-201ENST00000364802 75 ntBASIC2.06□□□□□ -2.08
CHRNA4P43681 MIR1185-1-201ENST00000408598 86 ntBASIC2.06□□□□□ -2.08
CHRNA4P43681 RNA5SP450-201ENST00000411206 102 ntBASIC2.06□□□□□ -2.08
CHRNA4P43681 RNU7-24P-201ENST00000458867 62 ntBASIC2.06□□□□□ -2.08
CHRNA4P43681 RNU7-185P-201ENST00000459215 60 ntBASIC2.06□□□□□ -2.08
CHRNA4P43681 MIR4529-201ENST00000578110 78 ntBASIC2.06□□□□□ -2.08
CHRNA4P43681 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.06□□□□□ -2.08
CHRNA4P43681 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.06□□□□□ -2.08
CHRNA4P43681 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CHRNA4P43681 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CHRNA4P43681 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHRNA4P43681 RNA5SP99-201ENST00000364020 114 ntBASIC2.05□□□□□ -2.08
CHRNA4P43681 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHRNA4P43681 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
CHRNA4P43681 RNA5SP95-201ENST00000410319 137 ntBASIC2.05□□□□□ -2.08
CHRNA4P43681 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
CHRNA4P43681 GHRLOS.1-201ENST00000610995 70 ntBASIC2.05□□□□□ -2.08
CHRNA4P43681 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.05□□□□□ -2.08
CHRNA4P43681 AP000553.5-201ENST00000641933 54 ntBASIC2.05□□□□□ -2.08
CHRNA4P43681 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CHRNA4P43681 MIR1257-201ENST00000408490 117 ntBASIC2.04□□□□□ -2.08
CHRNA4P43681 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
CHRNA4P43681 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CHRNA4P43681 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
CHRNA4P43681 AC023934.1-201ENST00000574529 2389 ntBASIC2.03□□□□□ -2.08
CHRNA4P43681 RNU6-1039P-201ENST00000383931 107 ntBASIC2.03□□□□□ -2.08
CHRNA4P43681 AL133373.1-201ENST00000497098 94 ntBASIC2.03□□□□□ -2.08
CHRNA4P43681 RNU6-287P-201ENST00000516230 98 ntBASIC2.03□□□□□ -2.08
CHRNA4P43681 RNU6-122P-201ENST00000516818 107 ntBASIC2.03□□□□□ -2.08
CHRNA4P43681 MIR219B-201ENST00000637023 88 ntBASIC2.03□□□□□ -2.08
CHRNA4P43681 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHRNA4P43681 MIR103A2-201ENST00000362154 78 ntBASIC2.02□□□□□ -2.09
CHRNA4P43681 SNORD115-44-201ENST00000365391 82 ntBASIC2.02□□□□□ -2.09
CHRNA4P43681 AL356379.1-201ENST00000414105 126 ntBASIC2.02□□□□□ -2.09
CHRNA4P43681 AC055731.1-201ENST00000474387 401 ntBASIC2.02□□□□□ -2.09
CHRNA4P43681 AC015688.6-201ENST00000577737 104 ntBASIC2.02□□□□□ -2.09
CHRNA4P43681 MIR3938-201ENST00000582157 103 ntBASIC2.02□□□□□ -2.09
CHRNA4P43681 RNU6-495P-201ENST00000362995 107 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 249.7 ms