Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 Y_RNA.286-201ENST00000364813 102 ntBASIC-2.68□□□□□ -2.84
CLIP1P30622 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.68□□□□□ -2.84
CLIP1P30622 Y_RNA.560-201ENST00000384689 102 ntBASIC-2.68□□□□□ -2.84
CLIP1P30622 MIR5688-201ENST00000580619 83 ntBASIC-2.68□□□□□ -2.84
CLIP1P30622 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.69□□□□□ -2.84
CLIP1P30622 RNU6-608P-201ENST00000383927 104 ntBASIC-2.69□□□□□ -2.84
CLIP1P30622 MT-TH-201ENST00000387441 69 ntBASIC-2.69□□□□□ -2.84
CLIP1P30622 RNU6-258P-201ENST00000390884 101 ntBASIC-2.69□□□□□ -2.84
CLIP1P30622 RNU6-1050P-201ENST00000410388 107 ntBASIC-2.69□□□□□ -2.84
CLIP1P30622 RNU7-123P-201ENST00000515911 60 ntBASIC-2.69□□□□□ -2.84
CLIP1P30622 RNU6-75P-201ENST00000515944 104 ntBASIC-2.69□□□□□ -2.84
CLIP1P30622 AP003461.1-201ENST00000528866 78 ntBASIC-2.69□□□□□ -2.84
CLIP1P30622 RNU7-164P-201ENST00000459221 62 ntBASIC-2.7□□□□□ -2.84
CLIP1P30622 RNU6-518P-201ENST00000516056 96 ntBASIC-2.7□□□□□ -2.84
CLIP1P30622 MIR548AG1-201ENST00000579932 66 ntBASIC-2.7□□□□□ -2.84
CLIP1P30622 MIR3140-201ENST00000583685 90 ntBASIC-2.7□□□□□ -2.84
CLIP1P30622 C8orf59P2-201ENST00000603441 271 ntBASIC-2.7□□□□□ -2.84
CLIP1P30622 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.71□□□□□ -2.84
CLIP1P30622 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.71□□□□□ -2.84
CLIP1P30622 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.71□□□□□ -2.84
CLIP1P30622 RNU6-260P-201ENST00000384092 107 ntBASIC-2.71□□□□□ -2.84
CLIP1P30622 RNU7-24P-201ENST00000458867 62 ntBASIC-2.71□□□□□ -2.84
CLIP1P30622 AC021443.1-201ENST00000604478 211 ntBASIC-2.71□□□□□ -2.84
CLIP1P30622 AC090617.10-201ENST00000624308 134 ntBASIC-2.71□□□□□ -2.84
CLIP1P30622 AC068137.3-201ENST00000639191 341 ntBASIC-2.71□□□□□ -2.84
CLIP1P30622 SNORA75-201ENST00000384158 137 ntBASIC-2.72□□□□□ -2.84
CLIP1P30622 MTND1P1-201ENST00000445453 368 ntBASIC-2.72□□□□□ -2.84
CLIP1P30622 RNU6-1213P-201ENST00000517075 94 ntBASIC-2.72□□□□□ -2.84
CLIP1P30622 AC120024.2-201ENST00000576526 175 ntBASIC-2.72□□□□□ -2.84
CLIP1P30622 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.72□□□□□ -2.84
CLIP1P30622 RNU6-1272P-201ENST00000362776 107 ntBASIC-2.73□□□□□ -2.85
CLIP1P30622 RNU6-563P-201ENST00000364872 108 ntBASIC-2.73□□□□□ -2.85
CLIP1P30622 Y_RNA.409-201ENST00000383990 98 ntBASIC-2.73□□□□□ -2.85
CLIP1P30622 RNU6-937P-201ENST00000384325 106 ntBASIC-2.73□□□□□ -2.85
CLIP1P30622 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.73□□□□□ -2.85
CLIP1P30622 RNY3P10-201ENST00000384764 102 ntBASIC-2.73□□□□□ -2.85
CLIP1P30622 MIR624-201ENST00000385217 97 ntBASIC-2.73□□□□□ -2.85
CLIP1P30622 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.73□□□□□ -2.85
CLIP1P30622 RNU6-521P-201ENST00000516663 105 ntBASIC-2.73□□□□□ -2.85
CLIP1P30622 RNU6-566P-201ENST00000516790 107 ntBASIC-2.73□□□□□ -2.85
CLIP1P30622 Y_RNA.404-201ENST00000383978 102 ntBASIC-2.74□□□□□ -2.85
CLIP1P30622 MIR203A-201ENST00000384836 110 ntBASIC-2.74□□□□□ -2.85
CLIP1P30622 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.74□□□□□ -2.85
CLIP1P30622 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.74□□□□□ -2.85
CLIP1P30622 UBE2WP1-201ENST00000362030 340 ntBASIC-2.75□□□□□ -2.85
CLIP1P30622 SNORA63.2-201ENST00000362603 126 ntBASIC-2.75□□□□□ -2.85
CLIP1P30622 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.75□□□□□ -2.85
CLIP1P30622 Y_RNA.152-201ENST00000363578 100 ntBASIC-2.75□□□□□ -2.85
CLIP1P30622 Y_RNA.176-201ENST00000363815 109 ntBASIC-2.75□□□□□ -2.85
CLIP1P30622 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.75□□□□□ -2.85
CLIP1P30622 RNU6-120P-201ENST00000516077 103 ntBASIC-2.75□□□□□ -2.85
CLIP1P30622 RNU6-561P-201ENST00000516222 102 ntBASIC-2.75□□□□□ -2.85
CLIP1P30622 AC018645.2-201ENST00000609151 472 ntBASIC-2.75□□□□□ -2.85
CLIP1P30622 AC048344.4-201ENST00000619744 527 ntBASIC-2.75□□□□□ -2.85
CLIP1P30622 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 Y_RNA.605-201ENST00000410577 105 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 RNU6-240P-201ENST00000516098 97 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 RNU6-1016P-201ENST00000516689 94 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 RNU6-453P-201ENST00000516819 85 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 MIR466-201ENST00000580653 84 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 U2.1-201ENST00000618978 145 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 Y_RNA.80-201ENST00000362996 102 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 SNORD63-201ENST00000384262 68 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 AC138907.4-201ENST00000570107 226 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 RNU6-90P-201ENST00000606352 106 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 Y_RNA.772-201ENST00000606692 102 ntBASIC-2.76□□□□□ -2.85
CLIP1P30622 SNORA24B-201ENST00000384176 131 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 RNU6-630P-201ENST00000391258 106 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 MIR548G-201ENST00000408442 89 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 RNU2-72P-201ENST00000411175 163 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 MTND3P22-201ENST00000510932 243 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 Y_RNA.708-201ENST00000516950 96 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-2.77□□□□□ -2.85
CLIP1P30622 MIR4509-3-201ENST00000578671 94 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 MIR4509-2-201ENST00000583920 94 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 AC005899.2-201ENST00000584353 90 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 AC040904.1-201ENST00000590850 223 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 AC119751.7-201ENST00000600494 245 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 PISRT1.1-201ENST00000616930 107 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 MIR4509-1-201ENST00000618224 94 ntBASIC-2.77□□□□□ -2.85
CLIP1P30622 RNU4-24P-201ENST00000364565 139 ntBASIC-2.78□□□□□ -2.85
CLIP1P30622 Y_RNA.526-201ENST00000384572 110 ntBASIC-2.78□□□□□ -2.85
CLIP1P30622 MIR513B-201ENST00000385136 84 ntBASIC-2.78□□□□□ -2.85
CLIP1P30622 MIR628-201ENST00000385229 95 ntBASIC-2.78□□□□□ -2.85
CLIP1P30622 RNU6-332P-201ENST00000391193 108 ntBASIC-2.78□□□□□ -2.85
CLIP1P30622 SNORA79-201ENST00000408376 140 ntBASIC-2.78□□□□□ -2.85
CLIP1P30622 MIR23C-201ENST00000579846 100 ntBASIC-2.78□□□□□ -2.85
CLIP1P30622 RNU6-478P-201ENST00000363904 110 ntBASIC-2.79□□□□□ -2.86
CLIP1P30622 Y_RNA.222-201ENST00000364264 102 ntBASIC-2.79□□□□□ -2.86
CLIP1P30622 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.79□□□□□ -2.86
CLIP1P30622 AL606534.2-204ENST00000635008 178 ntBASIC-2.79□□□□□ -2.86
CLIP1P30622 RNU6-978P-201ENST00000364371 103 ntBASIC-2.8□□□□□ -2.86
CLIP1P30622 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.8□□□□□ -2.86
CLIP1P30622 MIR520D-201ENST00000385002 87 ntBASIC-2.8□□□□□ -2.86
CLIP1P30622 Y_RNA.599-201ENST00000410489 109 ntBASIC-2.8□□□□□ -2.86
CLIP1P30622 AL731563.1-201ENST00000442202 214 ntBASIC-2.8□□□□□ -2.86
CLIP1P30622 MTND3P10-201ENST00000450967 341 ntBASIC-2.8□□□□□ -2.86
CLIP1P30622 RNA5SP236-201ENST00000516169 116 ntBASIC-2.8□□□□□ -2.86
CLIP1P30622 SNORD116-25-201ENST00000516517 92 ntBASIC-2.8□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 223.4 ms