Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 Y_RNA.467-201ENST00000384297 102 ntBASIC1.08□□□□□ -2.24
RHOP08100 RNU6-972P-201ENST00000391208 107 ntBASIC1.08□□□□□ -2.24
RHOP08100 RNU6-977P-201ENST00000516411 103 ntBASIC1.08□□□□□ -2.24
RHOP08100 RNA5SP170-201ENST00000517150 101 ntBASIC1.08□□□□□ -2.24
RHOP08100 Y_RNA.342-201ENST00000365352 113 ntBASIC1.07□□□□□ -2.24
RHOP08100 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RHOP08100 RNU6-644P-201ENST00000391155 98 ntBASIC1.07□□□□□ -2.24
RHOP08100 RNU7-56P-201ENST00000458744 62 ntBASIC1.07□□□□□ -2.24
RHOP08100 RNU7-61P-201ENST00000515897 61 ntBASIC1.07□□□□□ -2.24
RHOP08100 RNU6-850P-201ENST00000516934 103 ntBASIC1.07□□□□□ -2.24
RHOP08100 AL136317.1-201ENST00000612653 226 ntBASIC1.07□□□□□ -2.24
RHOP08100 MALAT1.1-201ENST00000618249 95 ntBASIC1.07□□□□□ -2.24
RHOP08100 RNU6-364P-201ENST00000384387 107 ntBASIC1.06□□□□□ -2.24
RHOP08100 RNU6-887P-201ENST00000410660 100 ntBASIC1.06□□□□□ -2.24
RHOP08100 BX276092.1-201ENST00000427368 251 ntBASIC1.06□□□□□ -2.24
RHOP08100 RNU7-102P-201ENST00000458948 62 ntBASIC1.06□□□□□ -2.24
RHOP08100 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
RHOP08100 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
RHOP08100 MIR373-201ENST00000362273 69 ntBASIC1.05□□□□□ -2.24
RHOP08100 Y_RNA.56-201ENST00000362798 112 ntBASIC1.05□□□□□ -2.24
RHOP08100 SNORD114-26-201ENST00000363543 72 ntBASIC1.05□□□□□ -2.24
RHOP08100 RNU6-1125P-201ENST00000363601 107 ntBASIC1.05□□□□□ -2.24
RHOP08100 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
RHOP08100 MIR488-201ENST00000365739 83 ntBASIC1.05□□□□□ -2.24
RHOP08100 RNU6-480P-201ENST00000384332 107 ntBASIC1.05□□□□□ -2.24
RHOP08100 MIR598-201ENST00000384868 97 ntBASIC1.05□□□□□ -2.24
RHOP08100 RNU1-119P-201ENST00000391122 165 ntBASIC1.05□□□□□ -2.24
RHOP08100 SNORD100-201ENST00000408573 76 ntBASIC1.05□□□□□ -2.24
RHOP08100 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
RHOP08100 AC013244.2-201ENST00000603396 103 ntBASIC1.05□□□□□ -2.24
RHOP08100 AC211469.2-201ENST00000605461 205 ntBASIC1.05□□□□□ -2.24
RHOP08100 RNU6-86P-201ENST00000606534 107 ntBASIC1.05□□□□□ -2.24
RHOP08100 RNU7-10P-201ENST00000607194 63 ntBASIC1.05□□□□□ -2.24
RHOP08100 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RHOP08100 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
RHOP08100 Y_RNA.43-201ENST00000362670 111 ntBASIC1.04□□□□□ -2.24
RHOP08100 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
RHOP08100 MIR520F-201ENST00000384824 87 ntBASIC1.04□□□□□ -2.24
RHOP08100 MIR519A1-201ENST00000385257 85 ntBASIC1.04□□□□□ -2.24
RHOP08100 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
RHOP08100 MIR548H5-201ENST00000580314 60 ntBASIC1.04□□□□□ -2.24
RHOP08100 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RHOP08100 MIR101-2-201ENST00000362195 79 ntBASIC1.03□□□□□ -2.24
RHOP08100 Y_RNA.290-201ENST00000364879 114 ntBASIC1.03□□□□□ -2.24
RHOP08100 Y_RNA.369-201ENST00000365568 117 ntBASIC1.03□□□□□ -2.24
RHOP08100 MIR942-201ENST00000401111 86 ntBASIC1.03□□□□□ -2.24
RHOP08100 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
RHOP08100 AC008608.1-201ENST00000603910 127 ntBASIC1.03□□□□□ -2.24
RHOP08100 AC103810.7-201ENST00000607821 91 ntBASIC1.03□□□□□ -2.24
RHOP08100 U7.3-201ENST00000616123 62 ntBASIC1.03□□□□□ -2.24
RHOP08100 PVT1_3.1-201ENST00000620853 95 ntBASIC1.03□□□□□ -2.24
RHOP08100 Y_RNA.36-201ENST00000362602 112 ntBASIC1.02□□□□□ -2.25
RHOP08100 SNORD116-10-201ENST00000363791 102 ntBASIC1.02□□□□□ -2.25
RHOP08100 Y_RNA.220-201ENST00000364244 109 ntBASIC1.02□□□□□ -2.25
RHOP08100 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
RHOP08100 Y_RNA.697-201ENST00000516776 113 ntBASIC1.02□□□□□ -2.25
RHOP08100 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
RHOP08100 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.02□□□□□ -2.25
RHOP08100 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.02□□□□□ -2.25
RHOP08100 Y_RNA.57-201ENST00000362806 113 ntBASIC1.01□□□□□ -2.25
RHOP08100 SNORD58A-201ENST00000383875 65 ntBASIC1.01□□□□□ -2.25
RHOP08100 Y_RNA.536-201ENST00000384621 113 ntBASIC1.01□□□□□ -2.25
RHOP08100 RNU6-291P-201ENST00000384720 107 ntBASIC1.01□□□□□ -2.25
RHOP08100 SNORD105-201ENST00000386910 85 ntBASIC1.01□□□□□ -2.25
RHOP08100 SNORD89-201ENST00000390981 114 ntBASIC1.01□□□□□ -2.25
RHOP08100 RNU6-448P-201ENST00000517052 107 ntBASIC1.01□□□□□ -2.25
RHOP08100 MIR5582-201ENST00000579697 68 ntBASIC1.01□□□□□ -2.25
RHOP08100 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
RHOP08100 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
RHOP08100 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
RHOP08100 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
RHOP08100 RNU6-1131P-201ENST00000364955 107 ntBASIC1□□□□□ -2.25
RHOP08100 MIR181B2-201ENST00000385004 89 ntBASIC1□□□□□ -2.25
RHOP08100 RNY4P30-201ENST00000410216 95 ntBASIC1□□□□□ -2.25
RHOP08100 RNA5SP255-201ENST00000516370 107 ntBASIC1□□□□□ -2.25
RHOP08100 RNU6-49P-201ENST00000384256 107 ntBASIC0.99□□□□□ -2.25
RHOP08100 MIR635-201ENST00000384830 98 ntBASIC0.99□□□□□ -2.25
RHOP08100 MIR520H-201ENST00000385126 88 ntBASIC0.99□□□□□ -2.25
RHOP08100 SNORD63B-201ENST00000411005 70 ntBASIC0.99□□□□□ -2.25
RHOP08100 AC092628.1-201ENST00000436250 252 ntBASIC0.99□□□□□ -2.25
RHOP08100 TRAJ51-201ENST00000504127 63 ntBASIC0.99□□□□□ -2.25
RHOP08100 AL513043.2-201ENST00000573941 143 ntBASIC0.99□□□□□ -2.25
RHOP08100 AC025627.3-201ENST00000582078 182 ntBASIC0.99□□□□□ -2.25
RHOP08100 AC025521.1-201ENST00000621624 286 ntBASIC0.99□□□□□ -2.25
RHOP08100 RNU6-1255P-201ENST00000363434 112 ntBASIC0.98□□□□□ -2.25
RHOP08100 RNU6-535P-201ENST00000384722 107 ntBASIC0.98□□□□□ -2.25
RHOP08100 RNU6-1254P-201ENST00000391266 104 ntBASIC0.98□□□□□ -2.25
RHOP08100 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.98□□□□□ -2.25
RHOP08100 AC097635.1-201ENST00000450678 155 ntBASIC0.98□□□□□ -2.25
RHOP08100 MIR6779-201ENST00000617283 64 ntBASIC0.98□□□□□ -2.25
RHOP08100 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.98□□□□□ -2.25
RHOP08100 Y_RNA.174-201ENST00000363781 105 ntBASIC0.97□□□□□ -2.25
RHOP08100 RNU6-162P-201ENST00000516228 103 ntBASIC0.97□□□□□ -2.25
RHOP08100 RNU6-844P-201ENST00000517175 102 ntBASIC0.97□□□□□ -2.25
RHOP08100 CYP3A137P-201ENST00000562436 69 ntBASIC0.97□□□□□ -2.25
RHOP08100 AC138907.6-201ENST00000568401 126 ntBASIC0.97□□□□□ -2.25
RHOP08100 AC138869.1-201ENST00000568623 124 ntBASIC0.97□□□□□ -2.25
RHOP08100 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.97□□□□□ -2.25
RHOP08100 uc_338.16-201ENST00000621804 95 ntBASIC0.97□□□□□ -2.25
RHOP08100 SNORD36A-201ENST00000362874 73 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms