Protein–RNA interactions for Protein: P04156

PRNP, Major prion protein, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRNPP04156 RNU6-719P-201ENST00000516671 104 ntBASIC1.86□□□□□ -2.11
PRNPP04156 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.86□□□□□ -2.11
PRNPP04156 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PRNPP04156 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PRNPP04156 RNA5SP264-201ENST00000363115 107 ntBASIC1.85□□□□□ -2.11
PRNPP04156 SNORD45.1-201ENST00000363181 77 ntBASIC1.85□□□□□ -2.11
PRNPP04156 MIR1257-201ENST00000408490 117 ntBASIC1.85□□□□□ -2.11
PRNPP04156 AC003989.2-201ENST00000440224 169 ntBASIC1.85□□□□□ -2.11
PRNPP04156 RNU7-185P-201ENST00000459215 60 ntBASIC1.85□□□□□ -2.11
PRNPP04156 MIR4769-201ENST00000584126 77 ntBASIC1.85□□□□□ -2.11
PRNPP04156 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PRNPP04156 Y_RNA.56-201ENST00000362798 112 ntBASIC1.84□□□□□ -2.11
PRNPP04156 MIR519A1-201ENST00000385257 85 ntBASIC1.84□□□□□ -2.11
PRNPP04156 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PRNPP04156 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PRNPP04156 RNU6-482P-201ENST00000391068 107 ntBASIC1.84□□□□□ -2.11
PRNPP04156 RNU4-37P-201ENST00000410214 84 ntBASIC1.84□□□□□ -2.11
PRNPP04156 HMGN2P23-201ENST00000456759 269 ntBASIC1.84□□□□□ -2.11
PRNPP04156 RNA5SP233-201ENST00000459153 113 ntBASIC1.84□□□□□ -2.11
PRNPP04156 snoU13.21-201ENST00000459368 105 ntBASIC1.84□□□□□ -2.11
PRNPP04156 RNU6-881P-201ENST00000516813 102 ntBASIC1.84□□□□□ -2.11
PRNPP04156 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
PRNPP04156 MIR6082-201ENST00000613604 109 ntBASIC1.84□□□□□ -2.11
PRNPP04156 AL773524.1-201ENST00000614065 229 ntBASIC1.84□□□□□ -2.11
PRNPP04156 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
PRNPP04156 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PRNPP04156 RNA5SP432-201ENST00000362480 116 ntBASIC1.83□□□□□ -2.12
PRNPP04156 Y_RNA.443-201ENST00000384135 111 ntBASIC1.83□□□□□ -2.12
PRNPP04156 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
PRNPP04156 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.83□□□□□ -2.12
PRNPP04156 SNORD83.1-201ENST00000411362 77 ntBASIC1.83□□□□□ -2.12
PRNPP04156 MIR2113-201ENST00000459007 91 ntBASIC1.83□□□□□ -2.12
PRNPP04156 AP003716.2-201ENST00000528260 108 ntBASIC1.83□□□□□ -2.12
PRNPP04156 AC015688.6-201ENST00000577737 104 ntBASIC1.83□□□□□ -2.12
PRNPP04156 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.83□□□□□ -2.12
PRNPP04156 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.83□□□□□ -2.12
PRNPP04156 AC084768.2-201ENST00000622736 221 ntBASIC1.83□□□□□ -2.12
PRNPP04156 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PRNPP04156 SNORA25.4-201ENST00000363666 124 ntBASIC1.82□□□□□ -2.12
PRNPP04156 RNU6-824P-201ENST00000363724 104 ntBASIC1.82□□□□□ -2.12
PRNPP04156 SNORA16.1-201ENST00000364597 132 ntBASIC1.82□□□□□ -2.12
PRNPP04156 RNU6-580P-201ENST00000365159 107 ntBASIC1.82□□□□□ -2.12
PRNPP04156 MIR451A-201ENST00000385059 72 ntBASIC1.82□□□□□ -2.12
PRNPP04156 RNU6-935P-201ENST00000410371 100 ntBASIC1.82□□□□□ -2.12
PRNPP04156 Y_RNA.606-201ENST00000410579 103 ntBASIC1.82□□□□□ -2.12
PRNPP04156 AC097510.1-201ENST00000510945 133 ntBASIC1.82□□□□□ -2.12
PRNPP04156 MIR4299-201ENST00000577899 72 ntBASIC1.82□□□□□ -2.12
PRNPP04156 AL353997.5-201ENST00000618886 171 ntBASIC1.82□□□□□ -2.12
PRNPP04156 MIR8063-201ENST00000621930 81 ntBASIC1.82□□□□□ -2.12
PRNPP04156 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.82□□□□□ -2.12
PRNPP04156 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
PRNPP04156 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PRNPP04156 MIR599-201ENST00000385069 95 ntBASIC1.81□□□□□ -2.12
PRNPP04156 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PRNPP04156 AC244636.1-201ENST00000421152 228 ntBASIC1.81□□□□□ -2.12
PRNPP04156 AC097635.1-201ENST00000450678 155 ntBASIC1.81□□□□□ -2.12
PRNPP04156 MIR8053-201ENST00000613344 75 ntBASIC1.81□□□□□ -2.12
PRNPP04156 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
PRNPP04156 AL359851.1-201ENST00000569460 4997 ntBASIC1.8□□□□□ -2.12
PRNPP04156 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PRNPP04156 RNA5SP212-201ENST00000391223 107 ntBASIC1.8□□□□□ -2.12
PRNPP04156 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.8□□□□□ -2.12
PRNPP04156 SNORA25.15-201ENST00000516487 89 ntBASIC1.8□□□□□ -2.12
PRNPP04156 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PRNPP04156 U6.81-201ENST00000612550 106 ntBASIC1.8□□□□□ -2.12
PRNPP04156 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PRNPP04156 SNORD115-22-201ENST00000364456 82 ntBASIC1.79□□□□□ -2.12
PRNPP04156 SNORA24B-201ENST00000384176 131 ntBASIC1.79□□□□□ -2.12
PRNPP04156 RNU6-604P-201ENST00000390917 100 ntBASIC1.79□□□□□ -2.12
PRNPP04156 RNA5SP338-201ENST00000410495 85 ntBASIC1.79□□□□□ -2.12
PRNPP04156 MIR514B-201ENST00000516774 80 ntBASIC1.79□□□□□ -2.12
PRNPP04156 SNORA77B-201ENST00000578179 125 ntBASIC1.79□□□□□ -2.12
PRNPP04156 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
PRNPP04156 MIR4773-1-201ENST00000637203 78 ntBASIC1.79□□□□□ -2.12
PRNPP04156 Y_RNA.330-201ENST00000365230 109 ntBASIC1.78□□□□□ -2.12
PRNPP04156 RNU6-1057P-201ENST00000517162 102 ntBASIC1.78□□□□□ -2.12
PRNPP04156 AC138907.6-201ENST00000568401 126 ntBASIC1.78□□□□□ -2.12
PRNPP04156 AC138869.1-201ENST00000568623 124 ntBASIC1.78□□□□□ -2.12
PRNPP04156 MTRNR2L2-201ENST00000604882 87 ntBASIC1.78□□□□□ -2.12
PRNPP04156 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.78□□□□□ -2.12
PRNPP04156 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.78□□□□□ -2.12
PRNPP04156 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRNPP04156 RNU6-1216P-201ENST00000362590 107 ntBASIC1.77□□□□□ -2.13
PRNPP04156 SNORD113.1-201ENST00000363280 73 ntBASIC1.77□□□□□ -2.13
PRNPP04156 RNA5SP99-201ENST00000364020 114 ntBASIC1.77□□□□□ -2.13
PRNPP04156 RNU6-499P-201ENST00000365615 107 ntBASIC1.77□□□□□ -2.13
PRNPP04156 AC019176.1-201ENST00000518519 225 ntBASIC1.77□□□□□ -2.13
PRNPP04156 MIR4771-2-201ENST00000577758 74 ntBASIC1.77□□□□□ -2.13
PRNPP04156 MIR4771-1-201ENST00000582617 74 ntBASIC1.77□□□□□ -2.13
PRNPP04156 MIR8074-201ENST00000615081 81 ntBASIC1.77□□□□□ -2.13
PRNPP04156 AP000553.5-201ENST00000641933 54 ntBASIC1.77□□□□□ -2.13
PRNPP04156 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
PRNPP04156 RNU6-934P-201ENST00000365154 107 ntBASIC1.76□□□□□ -2.13
PRNPP04156 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
PRNPP04156 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
PRNPP04156 RNU6-274P-201ENST00000459566 107 ntBASIC1.76□□□□□ -2.13
PRNPP04156 RNU6-765P-201ENST00000516916 99 ntBASIC1.76□□□□□ -2.13
PRNPP04156 MIR4419B-201ENST00000577260 68 ntBASIC1.76□□□□□ -2.13
PRNPP04156 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
PRNPP04156 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 236.8 ms