Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 MIR34C-201ENST00000384831 77 ntBASIC0.09□□□□□ -2.4
DDX58O95786 AC097635.1-201ENST00000450678 155 ntBASIC0.09□□□□□ -2.4
DDX58O95786 RNU6-848P-201ENST00000515948 107 ntBASIC0.09□□□□□ -2.4
DDX58O95786 RNU6-617P-201ENST00000516147 107 ntBASIC0.09□□□□□ -2.4
DDX58O95786 RNU6-473P-201ENST00000516164 107 ntBASIC0.09□□□□□ -2.4
DDX58O95786 RNU6-1049P-201ENST00000516414 107 ntBASIC0.09□□□□□ -2.4
DDX58O95786 MTND5P40-201ENST00000559945 246 ntBASIC0.09□□□□□ -2.4
DDX58O95786 RNU6-170P-201ENST00000362832 104 ntBASIC0.08□□□□□ -2.4
DDX58O95786 Y_RNA.528-201ENST00000384575 108 ntBASIC0.08□□□□□ -2.4
DDX58O95786 SNORD63B-201ENST00000411005 70 ntBASIC0.08□□□□□ -2.4
DDX58O95786 AC108059.2-201ENST00000434626 151 ntBASIC0.08□□□□□ -2.4
DDX58O95786 RNU7-195P-201ENST00000458793 62 ntBASIC0.08□□□□□ -2.4
DDX58O95786 RPL39P34-201ENST00000477141 156 ntBASIC0.08□□□□□ -2.4
DDX58O95786 Y_RNA.809-201ENST00000516058 95 ntBASIC0.08□□□□□ -2.4
DDX58O95786 MIR499B-201ENST00000636498 73 ntBASIC0.08□□□□□ -2.4
DDX58O95786 SNORD115-19-201ENST00000363098 82 ntBASIC0.07□□□□□ -2.4
DDX58O95786 SNORD115-18-201ENST00000363293 82 ntBASIC0.07□□□□□ -2.4
DDX58O95786 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNA5SP403-201ENST00000363598 108 ntBASIC0.07□□□□□ -2.4
DDX58O95786 SNORD115-17-201ENST00000364612 82 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNA5SP128-201ENST00000365305 116 ntBASIC0.07□□□□□ -2.4
DDX58O95786 MIR643-201ENST00000385267 97 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.07□□□□□ -2.4
DDX58O95786 SNORA7.5-201ENST00000410672 110 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNU6-426P-201ENST00000516464 97 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNU6-1061P-201ENST00000516530 99 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNA5SP395-201ENST00000516567 118 ntBASIC0.07□□□□□ -2.4
DDX58O95786 MIR1255B1-201ENST00000636325 63 ntBASIC0.07□□□□□ -2.4
DDX58O95786 RNU6-235P-201ENST00000362644 107 ntBASIC0.06□□□□□ -2.4
DDX58O95786 RNU6-781P-201ENST00000516377 101 ntBASIC0.06□□□□□ -2.4
DDX58O95786 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
DDX58O95786 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
DDX58O95786 AL162376.1-201ENST00000624117 175 ntBASIC0.06□□□□□ -2.4
DDX58O95786 AL512310.12-203ENST00000640543 90 ntBASIC0.06□□□□□ -2.4
DDX58O95786 Y_RNA.362-201ENST00000365518 110 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-571P-201ENST00000384128 107 ntBASIC0.05□□□□□ -2.4
DDX58O95786 MIR329-2-201ENST00000385029 84 ntBASIC0.05□□□□□ -2.4
DDX58O95786 MIR610-201ENST00000385139 96 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-127P-201ENST00000390897 107 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-1265P-201ENST00000516342 103 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-850P-201ENST00000516934 103 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-794P-201ENST00000517261 64 ntBASIC0.05□□□□□ -2.4
DDX58O95786 RNU6-35P-201ENST00000384530 107 ntBASIC0.04□□□□□ -2.4
DDX58O95786 Y_RNA.660-201ENST00000516002 120 ntBASIC0.04□□□□□ -2.4
DDX58O95786 RNU6-1232P-201ENST00000516299 86 ntBASIC0.04□□□□□ -2.4
DDX58O95786 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
DDX58O95786 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
DDX58O95786 Y_RNA.343-201ENST00000365354 112 ntBASIC0.03□□□□□ -2.4
DDX58O95786 RNU6-524P-201ENST00000384270 107 ntBASIC0.03□□□□□ -2.4
DDX58O95786 Y_RNA.555-201ENST00000384673 110 ntBASIC0.03□□□□□ -2.4
DDX58O95786 MIR548D2-201ENST00000384955 97 ntBASIC0.03□□□□□ -2.4
DDX58O95786 RNU6-269P-201ENST00000391077 97 ntBASIC0.03□□□□□ -2.4
DDX58O95786 RNU6-735P-201ENST00000410612 107 ntBASIC0.03□□□□□ -2.4
DDX58O95786 MIR5706-201ENST00000579841 80 ntBASIC0.03□□□□□ -2.4
DDX58O95786 MIR6759-201ENST00000638110 65 ntBASIC0.03□□□□□ -2.4
DDX58O95786 Y_RNA.342-201ENST00000365352 113 ntBASIC0.02□□□□□ -2.41
DDX58O95786 SPINT5P-201ENST00000448174 155 ntBASIC0.02□□□□□ -2.41
DDX58O95786 RNU7-13P-201ENST00000516413 62 ntBASIC0.02□□□□□ -2.41
DDX58O95786 U7.6-201ENST00000610841 64 ntBASIC0.02□□□□□ -2.41
DDX58O95786 AC025166.1-201ENST00000612411 163 ntBASIC0.02□□□□□ -2.41
DDX58O95786 SNORA70.25-201ENST00000612741 95 ntBASIC0.02□□□□□ -2.41
DDX58O95786 Y_RNA.170-201ENST00000363746 110 ntBASIC0.01□□□□□ -2.41
DDX58O95786 SNORD41.1-201ENST00000391000 69 ntBASIC0.01□□□□□ -2.41
DDX58O95786 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.01□□□□□ -2.41
DDX58O95786 RNU7-106P-201ENST00000459514 67 ntBASIC0.01□□□□□ -2.41
DDX58O95786 RNU6-1234P-201ENST00000516877 103 ntBASIC0.01□□□□□ -2.41
DDX58O95786 AC073869.9-201ENST00000641610 120 ntBASIC0.01□□□□□ -2.41
DDX58O95786 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
DDX58O95786 RNU6-1260P-201ENST00000362944 107 ntBASIC0□□□□□ -2.41
DDX58O95786 Y_RNA.155-201ENST00000363632 101 ntBASIC0□□□□□ -2.41
DDX58O95786 RNY4P6-201ENST00000363667 96 ntBASIC0□□□□□ -2.41
DDX58O95786 MIR519A1-201ENST00000385257 85 ntBASIC0□□□□□ -2.41
DDX58O95786 RNU7-200P-201ENST00000516105 62 ntBASIC0□□□□□ -2.41
DDX58O95786 RNU1-29P-201ENST00000606574 126 ntBASIC0□□□□□ -2.41
DDX58O95786 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0□□□□□ -2.41
DDX58O95786 RNU6-652P-201ENST00000365488 107 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 MIR593-201ENST00000384856 100 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 MIR516A2-201ENST00000384888 90 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 MIR516A1-201ENST00000385033 90 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 SNORA40-201ENST00000388090 126 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
DDX58O95786 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 RNU6-509P-201ENST00000363519 107 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 RNU6-409P-201ENST00000384114 104 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 MTND4LP9-201ENST00000427694 174 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.02□□□□□ -2.41
DDX58O95786 MTND5P18-201ENST00000445624 1801 ntBASIC-0.03□□□□□ -2.41
DDX58O95786 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.03□□□□□ -2.41
DDX58O95786 RNU6-363P-201ENST00000362895 105 ntBASIC-0.03□□□□□ -2.41
DDX58O95786 AC006210.1-201ENST00000424882 111 ntBASIC-0.03□□□□□ -2.41
DDX58O95786 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.03□□□□□ -2.41
DDX58O95786 SNORD58C-201ENST00000365223 64 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 SNORD110-201ENST00000408189 75 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 RNU7-74P-201ENST00000459104 62 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 RNA5SP476-201ENST00000516613 103 ntBASIC-0.04□□□□□ -2.42
DDX58O95786 NAMPTP3-201ENST00000569273 224 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 257.3 ms