Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU4-36P-201ENST00000364294 144 ntBASIC0.71□□□□□ -2.3
PRKNO60260 MIR590-201ENST00000385008 97 ntBASIC0.71□□□□□ -2.3
PRKNO60260 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
PRKNO60260 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
PRKNO60260 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.71□□□□□ -2.3
PRKNO60260 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
PRKNO60260 RNU4-58P-201ENST00000363192 141 ntBASIC0.7□□□□□ -2.3
PRKNO60260 RNU6-1113P-201ENST00000384348 107 ntBASIC0.7□□□□□ -2.3
PRKNO60260 SNORD38.2-201ENST00000384470 69 ntBASIC0.7□□□□□ -2.3
PRKNO60260 MIR608-201ENST00000384820 100 ntBASIC0.7□□□□□ -2.3
PRKNO60260 MIR573-201ENST00000384964 99 ntBASIC0.7□□□□□ -2.3
PRKNO60260 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
PRKNO60260 AC244098.3-201ENST00000424803 96 ntBASIC0.7□□□□□ -2.3
PRKNO60260 AC004941.2-201ENST00000427009 228 ntBASIC0.7□□□□□ -2.3
PRKNO60260 RNU6-1194P-201ENST00000516208 104 ntBASIC0.7□□□□□ -2.3
PRKNO60260 RNU6-765P-201ENST00000516916 99 ntBASIC0.7□□□□□ -2.3
PRKNO60260 AC091304.10-201ENST00000641554 121 ntBASIC0.7□□□□□ -2.3
PRKNO60260 Y_RNA.10-201ENST00000362371 110 ntBASIC0.69□□□□□ -2.3
PRKNO60260 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
PRKNO60260 RNU6-32P-201ENST00000383948 107 ntBASIC0.69□□□□□ -2.3
PRKNO60260 RNU6-13P-201ENST00000384248 107 ntBASIC0.69□□□□□ -2.3
PRKNO60260 RNY1P4-201ENST00000384595 115 ntBASIC0.69□□□□□ -2.3
PRKNO60260 RNU6-12P-201ENST00000384604 107 ntBASIC0.69□□□□□ -2.3
PRKNO60260 RNU6-41P-201ENST00000384741 107 ntBASIC0.69□□□□□ -2.3
PRKNO60260 MIR216A-201ENST00000385063 110 ntBASIC0.69□□□□□ -2.3
PRKNO60260 MIR548G-201ENST00000408442 89 ntBASIC0.69□□□□□ -2.3
PRKNO60260 Y_RNA.601-201ENST00000410500 113 ntBASIC0.69□□□□□ -2.3
PRKNO60260 MTATP6P29-201ENST00000415057 132 ntBASIC0.69□□□□□ -2.3
PRKNO60260 SNRPGP12-201ENST00000449481 213 ntBASIC0.69□□□□□ -2.3
PRKNO60260 Y_RNA.659-201ENST00000515994 113 ntBASIC0.69□□□□□ -2.3
PRKNO60260 RNU6-448P-201ENST00000517052 107 ntBASIC0.69□□□□□ -2.3
PRKNO60260 MIR4500-201ENST00000579472 76 ntBASIC0.69□□□□□ -2.3
PRKNO60260 RN7SL793P-201ENST00000583259 296 ntBASIC0.69□□□□□ -2.3
PRKNO60260 AC096720.1-201ENST00000604441 183 ntBASIC0.69□□□□□ -2.3
PRKNO60260 Y_RNA.818-201ENST00000618813 71 ntBASIC0.69□□□□□ -2.3
PRKNO60260 SNORD45B-201ENST00000364617 72 ntBASIC0.68□□□□□ -2.3
PRKNO60260 RNA5SP222-201ENST00000411039 105 ntBASIC0.68□□□□□ -2.3
PRKNO60260 SCARNA23-201ENST00000516060 130 ntBASIC0.68□□□□□ -2.3
PRKNO60260 RNU6-109P-201ENST00000516364 107 ntBASIC0.68□□□□□ -2.3
PRKNO60260 RNU6-184P-201ENST00000516514 107 ntBASIC0.68□□□□□ -2.3
PRKNO60260 Y_RNA.697-201ENST00000516776 113 ntBASIC0.68□□□□□ -2.3
PRKNO60260 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
PRKNO60260 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
PRKNO60260 RNU6-170P-201ENST00000362832 104 ntBASIC0.67□□□□□ -2.3
PRKNO60260 Y_RNA.173-201ENST00000363776 113 ntBASIC0.67□□□□□ -2.3
PRKNO60260 Y_RNA.495-201ENST00000384435 112 ntBASIC0.67□□□□□ -2.3
PRKNO60260 Y_RNA.544-201ENST00000384650 113 ntBASIC0.67□□□□□ -2.3
PRKNO60260 BX276092.1-201ENST00000427368 251 ntBASIC0.67□□□□□ -2.3
PRKNO60260 SPINT5P-201ENST00000448174 155 ntBASIC0.67□□□□□ -2.3
PRKNO60260 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.67□□□□□ -2.3
PRKNO60260 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
PRKNO60260 RNU6-795P-201ENST00000516323 103 ntBASIC0.67□□□□□ -2.3
PRKNO60260 AP003327.1-201ENST00000529684 127 ntBASIC0.67□□□□□ -2.3
PRKNO60260 MIR3612-201ENST00000579753 87 ntBASIC0.67□□□□□ -2.3
PRKNO60260 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
PRKNO60260 MIR548Z-201ENST00000584743 97 ntBASIC0.67□□□□□ -2.3
PRKNO60260 RNU6-90P-201ENST00000606352 106 ntBASIC0.67□□□□□ -2.3
PRKNO60260 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
PRKNO60260 MIR101-2-201ENST00000362195 79 ntBASIC0.66□□□□□ -2.3
PRKNO60260 Y_RNA.95-201ENST00000363079 95 ntBASIC0.66□□□□□ -2.3
PRKNO60260 Y_RNA.107-201ENST00000363190 121 ntBASIC0.66□□□□□ -2.3
PRKNO60260 RNU6-1163P-201ENST00000364516 107 ntBASIC0.66□□□□□ -2.3
PRKNO60260 RNU6-571P-201ENST00000384128 107 ntBASIC0.66□□□□□ -2.3
PRKNO60260 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
PRKNO60260 SNORD100-201ENST00000408573 76 ntBASIC0.66□□□□□ -2.3
PRKNO60260 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
PRKNO60260 AC002350.1-201ENST00000490759 375 ntBASIC0.66□□□□□ -2.3
PRKNO60260 RNU6-158P-201ENST00000517104 100 ntBASIC0.66□□□□□ -2.3
PRKNO60260 MTND5P40-201ENST00000559945 246 ntBASIC0.66□□□□□ -2.3
PRKNO60260 AC012531.4-201ENST00000616509 177 ntBASIC0.66□□□□□ -2.3
PRKNO60260 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.66□□□□□ -2.3
PRKNO60260 Y_RNA.93-201ENST00000363066 109 ntBASIC0.65□□□□□ -2.31
PRKNO60260 RNU6-1244P-201ENST00000363614 108 ntBASIC0.65□□□□□ -2.31
PRKNO60260 RNA5SP117-201ENST00000365294 118 ntBASIC0.65□□□□□ -2.31
PRKNO60260 Y_RNA.536-201ENST00000384621 113 ntBASIC0.65□□□□□ -2.31
PRKNO60260 RNU6-291P-201ENST00000384720 107 ntBASIC0.65□□□□□ -2.31
PRKNO60260 RNU6-535P-201ENST00000384722 107 ntBASIC0.65□□□□□ -2.31
PRKNO60260 AC109327.2-201ENST00000448339 378 ntBASIC0.65□□□□□ -2.31
PRKNO60260 RNU6-168P-201ENST00000516189 101 ntBASIC0.65□□□□□ -2.31
PRKNO60260 RNU6-850P-201ENST00000516934 103 ntBASIC0.65□□□□□ -2.31
PRKNO60260 MIR4777-201ENST00000583710 86 ntBASIC0.65□□□□□ -2.31
PRKNO60260 MIR4439-201ENST00000583746 80 ntBASIC0.65□□□□□ -2.31
PRKNO60260 AP001318.4-201ENST00000616637 121 ntBASIC0.65□□□□□ -2.31
PRKNO60260 Y_RNA.348-201ENST00000365403 103 ntBASIC0.64□□□□□ -2.31
PRKNO60260 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
PRKNO60260 Y_RNA.467-201ENST00000384297 102 ntBASIC0.64□□□□□ -2.31
PRKNO60260 Y_RNA.567-201ENST00000384736 106 ntBASIC0.64□□□□□ -2.31
PRKNO60260 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
PRKNO60260 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
PRKNO60260 RNA5SP89-201ENST00000410300 108 ntBASIC0.64□□□□□ -2.31
PRKNO60260 MIR18A-201ENST00000362310 71 ntBASIC0.63□□□□□ -2.31
PRKNO60260 Y_RNA.32-201ENST00000362589 110 ntBASIC0.63□□□□□ -2.31
PRKNO60260 Y_RNA.56-201ENST00000362798 112 ntBASIC0.63□□□□□ -2.31
PRKNO60260 RNU6-640P-201ENST00000363693 105 ntBASIC0.63□□□□□ -2.31
PRKNO60260 RNY1P8-201ENST00000383970 114 ntBASIC0.63□□□□□ -2.31
PRKNO60260 RNU6-110P-201ENST00000384508 104 ntBASIC0.63□□□□□ -2.31
PRKNO60260 Y_RNA.677-201ENST00000516401 85 ntBASIC0.63□□□□□ -2.31
PRKNO60260 SNORA31.14-201ENST00000516728 116 ntBASIC0.63□□□□□ -2.31
PRKNO60260 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
PRKNO60260 MIR548H5-201ENST00000580314 60 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms