Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SNORD58C-201ENST00000365223 64 ntBASIC0.22□□□□□ -2.37
O00370 Y_RNA.360-201ENST00000365512 102 ntBASIC0.22□□□□□ -2.37
O00370 Y_RNA.568-201ENST00000384742 113 ntBASIC0.22□□□□□ -2.37
O00370 RNU6-257P-201ENST00000410238 98 ntBASIC0.22□□□□□ -2.37
O00370 AC244505.6-201ENST00000452829 130 ntBASIC0.22□□□□□ -2.37
O00370 RNU6-772P-201ENST00000516042 105 ntBASIC0.22□□□□□ -2.37
O00370 RNU6-1234P-201ENST00000516877 103 ntBASIC0.22□□□□□ -2.37
O00370 RNU7-161P-201ENST00000517289 62 ntBASIC0.22□□□□□ -2.37
O00370 MIR6828-201ENST00000636181 60 ntBASIC0.22□□□□□ -2.37
O00370 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
O00370 Y_RNA.155-201ENST00000363632 101 ntBASIC0.21□□□□□ -2.38
O00370 SNORD38.2-201ENST00000384470 69 ntBASIC0.21□□□□□ -2.38
O00370 MIR760-201ENST00000390220 80 ntBASIC0.21□□□□□ -2.38
O00370 RNA5SP63-201ENST00000391225 112 ntBASIC0.21□□□□□ -2.38
O00370 SNORD63B-201ENST00000411005 70 ntBASIC0.21□□□□□ -2.38
O00370 RNU7-195P-201ENST00000458793 62 ntBASIC0.21□□□□□ -2.38
O00370 RNU6-971P-201ENST00000516920 106 ntBASIC0.21□□□□□ -2.38
O00370 MIR6718-201ENST00000616153 80 ntBASIC0.21□□□□□ -2.38
O00370 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.21□□□□□ -2.38
O00370 MTND5P18-201ENST00000445624 1801 ntBASIC0.2□□□□□ -2.38
O00370 RNU6-170P-201ENST00000362832 104 ntBASIC0.2□□□□□ -2.38
O00370 Y_RNA.506-201ENST00000384494 102 ntBASIC0.2□□□□□ -2.38
O00370 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
O00370 AC097635.1-201ENST00000450678 155 ntBASIC0.2□□□□□ -2.38
O00370 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
O00370 Y_RNA.681-201ENST00000516445 113 ntBASIC0.2□□□□□ -2.38
O00370 RNU6-1212P-201ENST00000517023 104 ntBASIC0.2□□□□□ -2.38
O00370 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
O00370 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.2□□□□□ -2.38
O00370 RNU6-774P-201ENST00000363238 107 ntBASIC0.19□□□□□ -2.38
O00370 Y_RNA.525-201ENST00000384570 113 ntBASIC0.19□□□□□ -2.38
O00370 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.19□□□□□ -2.38
O00370 SPINT5P-201ENST00000448174 155 ntBASIC0.19□□□□□ -2.38
O00370 Y_RNA.809-201ENST00000516058 95 ntBASIC0.19□□□□□ -2.38
O00370 RNU6-850P-201ENST00000516934 103 ntBASIC0.19□□□□□ -2.38
O00370 MIR6755-201ENST00000619993 66 ntBASIC0.19□□□□□ -2.38
O00370 AC067863.3-201ENST00000624172 122 ntBASIC0.19□□□□□ -2.38
O00370 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.19□□□□□ -2.38
O00370 Y_RNA.344-201ENST00000365381 112 ntBASIC0.18□□□□□ -2.38
O00370 RNU6-1126P-201ENST00000384002 107 ntBASIC0.18□□□□□ -2.38
O00370 Y_RNA.507-201ENST00000384500 99 ntBASIC0.18□□□□□ -2.38
O00370 MIR548I2-201ENST00000408348 149 ntBASIC0.18□□□□□ -2.38
O00370 Y_RNA.630-201ENST00000411370 108 ntBASIC0.18□□□□□ -2.38
O00370 RNU7-107P-201ENST00000459121 61 ntBASIC0.18□□□□□ -2.38
O00370 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
O00370 AL157777.2-201ENST00000258070 137 ntBASIC0.17□□□□□ -2.38
O00370 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
O00370 RNU6-726P-201ENST00000364680 107 ntBASIC0.17□□□□□ -2.38
O00370 RNU6-863P-201ENST00000515989 104 ntBASIC0.17□□□□□ -2.38
O00370 Y_RNA.68-201ENST00000362881 102 ntBASIC0.16□□□□□ -2.38
O00370 RNY4P6-201ENST00000363667 96 ntBASIC0.16□□□□□ -2.38
O00370 MIR539-201ENST00000365690 78 ntBASIC0.16□□□□□ -2.38
O00370 RNY1P5-201ENST00000383890 115 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-409P-201ENST00000384114 104 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-571P-201ENST00000384128 107 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-524P-201ENST00000384270 107 ntBASIC0.16□□□□□ -2.38
O00370 MT-TR-201ENST00000387439 65 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-816P-201ENST00000390914 107 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-1268P-201ENST00000391214 107 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-1239P-201ENST00000391310 107 ntBASIC0.16□□□□□ -2.38
O00370 MIR3133-201ENST00000583157 78 ntBASIC0.16□□□□□ -2.38
O00370 RNA5SP403-201ENST00000363598 108 ntBASIC0.15□□□□□ -2.39
O00370 Y_RNA.346-201ENST00000365385 112 ntBASIC0.15□□□□□ -2.39
O00370 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
O00370 MIR516A2-201ENST00000384888 90 ntBASIC0.15□□□□□ -2.39
O00370 MIR516A1-201ENST00000385033 90 ntBASIC0.15□□□□□ -2.39
O00370 MIR643-201ENST00000385267 97 ntBASIC0.15□□□□□ -2.39
O00370 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.15□□□□□ -2.39
O00370 Y_RNA.342-201ENST00000365352 113 ntBASIC0.14□□□□□ -2.39
O00370 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
O00370 RNU7-106P-201ENST00000459514 67 ntBASIC0.14□□□□□ -2.39
O00370 RNU7-13P-201ENST00000516413 62 ntBASIC0.14□□□□□ -2.39
O00370 MIR499B-201ENST00000636498 73 ntBASIC0.14□□□□□ -2.39
O00370 RNU6-363P-201ENST00000362895 105 ntBASIC0.13□□□□□ -2.39
O00370 Y_RNA.362-201ENST00000365518 110 ntBASIC0.13□□□□□ -2.39
O00370 Y_RNA.586-201ENST00000391146 98 ntBASIC0.13□□□□□ -2.39
O00370 SNORA70.25-201ENST00000612741 95 ntBASIC0.13□□□□□ -2.39
O00370 Y_RNA.57-201ENST00000362806 113 ntBASIC0.12□□□□□ -2.39
O00370 Y_RNA.247-201ENST00000364500 92 ntBASIC0.12□□□□□ -2.39
O00370 MIR548I1-201ENST00000408810 149 ntBASIC0.12□□□□□ -2.39
O00370 RPL39P34-201ENST00000477141 156 ntBASIC0.12□□□□□ -2.39
O00370 RNU6-1232P-201ENST00000516299 86 ntBASIC0.12□□□□□ -2.39
O00370 Y_RNA.703-201ENST00000516846 111 ntBASIC0.12□□□□□ -2.39
O00370 MIR4315-1-201ENST00000636800 73 ntBASIC0.12□□□□□ -2.39
O00370 MIR4315-2-201ENST00000640925 73 ntBASIC0.12□□□□□ -2.39
O00370 RNU6-1313P-201ENST00000362622 102 ntBASIC0.11□□□□□ -2.39
O00370 RNA5SP128-201ENST00000365305 116 ntBASIC0.11□□□□□ -2.39
O00370 RNU6-269P-201ENST00000391077 97 ntBASIC0.11□□□□□ -2.39
O00370 MIR548G-201ENST00000408442 89 ntBASIC0.11□□□□□ -2.39
O00370 MIR5190-201ENST00000581537 80 ntBASIC0.11□□□□□ -2.39
O00370 SNORD114-5-201ENST00000362928 70 ntBASIC0.1□□□□□ -2.39
O00370 SNORD38.1-201ENST00000363863 68 ntBASIC0.1□□□□□ -2.39
O00370 RNU6-127P-201ENST00000390897 107 ntBASIC0.1□□□□□ -2.39
O00370 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
O00370 AC006210.1-201ENST00000424882 111 ntBASIC0.1□□□□□ -2.39
O00370 AL353813.1-201ENST00000440700 253 ntBASIC0.1□□□□□ -2.39
O00370 Y_RNA.649-201ENST00000459077 103 ntBASIC0.1□□□□□ -2.39
O00370 SNORD33.1-201ENST00000516213 88 ntBASIC0.1□□□□□ -2.39
O00370 RNU6-1265P-201ENST00000516342 103 ntBASIC0.1□□□□□ -2.39
O00370 AC104408.1-201ENST00000605241 170 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms