Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AC026436.1-201ENST00000510537 270 ntBASIC2.34□□□□□ -2.03
H3BM21 RNU6-287P-201ENST00000516230 98 ntBASIC2.34□□□□□ -2.03
H3BM21 RNA5SP402-201ENST00000517148 110 ntBASIC2.34□□□□□ -2.03
H3BM21 AC138907.6-201ENST00000568401 126 ntBASIC2.34□□□□□ -2.03
H3BM21 AC138869.1-201ENST00000568623 124 ntBASIC2.34□□□□□ -2.03
H3BM21 MIR4648-201ENST00000580107 72 ntBASIC2.34□□□□□ -2.03
H3BM21 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.34□□□□□ -2.03
H3BM21 MIR6873-201ENST00000622788 63 ntBASIC2.34□□□□□ -2.03
H3BM21 RNA5SP215-201ENST00000363440 122 ntBASIC2.33□□□□□ -2.04
H3BM21 SUMO2P12-201ENST00000405924 140 ntBASIC2.33□□□□□ -2.04
H3BM21 RN7SKP223-201ENST00000410582 62 ntBASIC2.33□□□□□ -2.04
H3BM21 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.33□□□□□ -2.04
H3BM21 MIR1273D-201ENST00000577266 86 ntBASIC2.33□□□□□ -2.04
H3BM21 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
H3BM21 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
H3BM21 AC004965.1-201ENST00000413033 213 ntBASIC2.32□□□□□ -2.04
H3BM21 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
H3BM21 RNU6-922P-201ENST00000516753 99 ntBASIC2.32□□□□□ -2.04
H3BM21 NAMPTP3-201ENST00000569273 224 ntBASIC2.32□□□□□ -2.04
H3BM21 AC046143.2-201ENST00000609789 160 ntBASIC2.32□□□□□ -2.04
H3BM21 AC245884.12-201ENST00000615364 59 ntBASIC2.32□□□□□ -2.04
H3BM21 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
H3BM21 RNU6-495P-201ENST00000362995 107 ntBASIC2.31□□□□□ -2.04
H3BM21 MIR764-201ENST00000390811 85 ntBASIC2.31□□□□□ -2.04
H3BM21 RNU6-360P-201ENST00000390944 104 ntBASIC2.31□□□□□ -2.04
H3BM21 RNA5SP95-201ENST00000410319 137 ntBASIC2.31□□□□□ -2.04
H3BM21 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.31□□□□□ -2.04
H3BM21 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
H3BM21 AC015712.3-201ENST00000559380 164 ntBASIC2.31□□□□□ -2.04
H3BM21 MIR548AD-201ENST00000584780 82 ntBASIC2.31□□□□□ -2.04
H3BM21 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
H3BM21 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
H3BM21 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
H3BM21 RNU6-302P-201ENST00000365249 107 ntBASIC2.3□□□□□ -2.04
H3BM21 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
H3BM21 AL603825.1-201ENST00000438481 80 ntBASIC2.3□□□□□ -2.04
H3BM21 RNU7-185P-201ENST00000459215 60 ntBASIC2.3□□□□□ -2.04
H3BM21 RNU6-765P-201ENST00000516916 99 ntBASIC2.3□□□□□ -2.04
H3BM21 SNORA31.17-201ENST00000516953 127 ntBASIC2.3□□□□□ -2.04
H3BM21 MIR3657-201ENST00000584818 117 ntBASIC2.3□□□□□ -2.04
H3BM21 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.3□□□□□ -2.04
H3BM21 RNA5SP259-201ENST00000365541 109 ntBASIC2.29□□□□□ -2.04
H3BM21 SNORA6-201ENST00000384033 151 ntBASIC2.29□□□□□ -2.04
H3BM21 MIR194-1-201ENST00000384892 85 ntBASIC2.29□□□□□ -2.04
H3BM21 MIR1257-201ENST00000408490 117 ntBASIC2.29□□□□□ -2.04
H3BM21 RNA5SP100-201ENST00000410903 110 ntBASIC2.29□□□□□ -2.04
H3BM21 RNA5SP59-201ENST00000410922 110 ntBASIC2.29□□□□□ -2.04
H3BM21 AL591806.2-201ENST00000433122 173 ntBASIC2.29□□□□□ -2.04
H3BM21 snoU13.25-201ENST00000458945 104 ntBASIC2.29□□□□□ -2.04
H3BM21 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.29□□□□□ -2.04
H3BM21 MIR5007-201ENST00000583098 95 ntBASIC2.29□□□□□ -2.04
H3BM21 MIR548V-201ENST00000584165 80 ntBASIC2.29□□□□□ -2.04
H3BM21 SNRPGP19-201ENST00000603826 189 ntBASIC2.29□□□□□ -2.04
H3BM21 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.29□□□□□ -2.04
H3BM21 AC106800.4-201ENST00000614905 153 ntBASIC2.29□□□□□ -2.04
H3BM21 uc_338.10-201ENST00000621872 182 ntBASIC2.29□□□□□ -2.04
H3BM21 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.29□□□□□ -2.04
H3BM21 RNU1-51P-201ENST00000365345 176 ntBASIC2.28□□□□□ -2.04
H3BM21 MIR1289-2-201ENST00000408360 111 ntBASIC2.28□□□□□ -2.04
H3BM21 AC108210.2-201ENST00000503681 201 ntBASIC2.28□□□□□ -2.04
H3BM21 Y_RNA.676-201ENST00000516393 96 ntBASIC2.28□□□□□ -2.04
H3BM21 RNU6-1089P-201ENST00000516473 104 ntBASIC2.28□□□□□ -2.04
H3BM21 MIR4529-201ENST00000578110 78 ntBASIC2.28□□□□□ -2.04
H3BM21 MIR6840-201ENST00000611937 71 ntBASIC2.28□□□□□ -2.04
H3BM21 RNU6-580P-201ENST00000365159 107 ntBASIC2.27□□□□□ -2.05
H3BM21 RNU6-482P-201ENST00000391068 107 ntBASIC2.27□□□□□ -2.05
H3BM21 SNORA31.25-201ENST00000517242 134 ntBASIC2.27□□□□□ -2.05
H3BM21 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.27□□□□□ -2.05
H3BM21 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
H3BM21 SNORD115-44-201ENST00000365391 82 ntBASIC2.26□□□□□ -2.05
H3BM21 MIR513A1-201ENST00000385138 129 ntBASIC2.26□□□□□ -2.05
H3BM21 MIR1185-1-201ENST00000408598 86 ntBASIC2.26□□□□□ -2.05
H3BM21 AP003716.2-201ENST00000528260 108 ntBASIC2.26□□□□□ -2.05
H3BM21 U1.36-201ENST00000620684 176 ntBASIC2.26□□□□□ -2.05
H3BM21 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
H3BM21 RNA5SP245-201ENST00000364239 121 ntBASIC2.25□□□□□ -2.05
H3BM21 MIR7-2-201ENST00000384970 110 ntBASIC2.25□□□□□ -2.05
H3BM21 RNU6-656P-201ENST00000516785 107 ntBASIC2.25□□□□□ -2.05
H3BM21 RNU6-902P-201ENST00000517212 91 ntBASIC2.25□□□□□ -2.05
H3BM21 MIR6132-201ENST00000622083 109 ntBASIC2.25□□□□□ -2.05
H3BM21 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
H3BM21 MIR103A2-201ENST00000362154 78 ntBASIC2.24□□□□□ -2.05
H3BM21 RNU6-520P-201ENST00000384717 104 ntBASIC2.24□□□□□ -2.05
H3BM21 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
H3BM21 RNU6-548P-201ENST00000517083 115 ntBASIC2.24□□□□□ -2.05
H3BM21 MIR6766-201ENST00000622641 72 ntBASIC2.24□□□□□ -2.05
H3BM21 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
H3BM21 RNU6-260P-201ENST00000384092 107 ntBASIC2.23□□□□□ -2.05
H3BM21 RNA5SP450-201ENST00000411206 102 ntBASIC2.23□□□□□ -2.05
H3BM21 snoU13.21-201ENST00000459368 105 ntBASIC2.23□□□□□ -2.05
H3BM21 RNU6-947P-201ENST00000516264 106 ntBASIC2.23□□□□□ -2.05
H3BM21 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
H3BM21 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
H3BM21 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
H3BM21 RNA5SP99-201ENST00000364020 114 ntBASIC2.22□□□□□ -2.05
H3BM21 RNU6-535P-201ENST00000384722 107 ntBASIC2.22□□□□□ -2.05
H3BM21 SNORD23.1-201ENST00000408212 104 ntBASIC2.22□□□□□ -2.05
H3BM21 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
H3BM21 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
H3BM21 RNU6-54P-201ENST00000365563 107 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms