Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
PTCH2Q9Y6C5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
PTCH2Q9Y6C5 SNORA7.5-201ENST00000410672 110 ntBASIC1.23□□□□□ -2.21
PTCH2Q9Y6C5 RNU7-56P-201ENST00000458744 62 ntBASIC1.23□□□□□ -2.21
PTCH2Q9Y6C5 AC068339.1-201ENST00000526965 141 ntBASIC1.23□□□□□ -2.21
PTCH2Q9Y6C5 MIR6082-201ENST00000613604 109 ntBASIC1.23□□□□□ -2.21
PTCH2Q9Y6C5 SNORD38.2-201ENST00000384470 69 ntBASIC1.22□□□□□ -2.21
PTCH2Q9Y6C5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
PTCH2Q9Y6C5 RNU7-102P-201ENST00000458948 62 ntBASIC1.22□□□□□ -2.21
PTCH2Q9Y6C5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.22□□□□□ -2.21
PTCH2Q9Y6C5 Y_RNA.13-201ENST00000362403 112 ntBASIC1.21□□□□□ -2.22
PTCH2Q9Y6C5 Y_RNA.42-201ENST00000362660 108 ntBASIC1.21□□□□□ -2.22
PTCH2Q9Y6C5 MIR520H-201ENST00000385126 88 ntBASIC1.21□□□□□ -2.22
PTCH2Q9Y6C5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.21□□□□□ -2.22
PTCH2Q9Y6C5 UBL5P1-201ENST00000507979 193 ntBASIC1.21□□□□□ -2.22
PTCH2Q9Y6C5 RNU6-589P-201ENST00000516485 107 ntBASIC1.21□□□□□ -2.22
PTCH2Q9Y6C5 AP003327.1-201ENST00000529684 127 ntBASIC1.21□□□□□ -2.22
PTCH2Q9Y6C5 MIR3973-201ENST00000579824 107 ntBASIC1.21□□□□□ -2.22
PTCH2Q9Y6C5 MIR8066-201ENST00000617280 78 ntBASIC1.21□□□□□ -2.22
PTCH2Q9Y6C5 AL512310.12-203ENST00000640543 90 ntBASIC1.21□□□□□ -2.22
PTCH2Q9Y6C5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 RNU6-1313P-201ENST00000362622 102 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 RNU6-1107P-201ENST00000364817 104 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 RNU6-1325P-201ENST00000364905 105 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 U8.6-201ENST00000364939 135 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 Y_RNA.323-201ENST00000365157 109 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 RNU6-429P-201ENST00000384582 108 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 MIR193B-201ENST00000384907 83 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 RNU6-1307P-201ENST00000391012 103 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 MIR5009-201ENST00000578736 100 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 MIR376B-201ENST00000614515 100 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.2□□□□□ -2.22
PTCH2Q9Y6C5 Y_RNA.119-201ENST00000363301 96 ntBASIC1.19□□□□□ -2.22
PTCH2Q9Y6C5 SNORA25.16-201ENST00000516741 121 ntBASIC1.19□□□□□ -2.22
PTCH2Q9Y6C5 Y_RNA.709-201ENST00000516952 92 ntBASIC1.19□□□□□ -2.22
PTCH2Q9Y6C5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
PTCH2Q9Y6C5 Y_RNA.360-201ENST00000365512 102 ntBASIC1.18□□□□□ -2.22
PTCH2Q9Y6C5 RNU6-679P-201ENST00000391003 106 ntBASIC1.18□□□□□ -2.22
PTCH2Q9Y6C5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.18□□□□□ -2.22
PTCH2Q9Y6C5 MIR1273G-201ENST00000577677 100 ntBASIC1.18□□□□□ -2.22
PTCH2Q9Y6C5 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
PTCH2Q9Y6C5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PTCH2Q9Y6C5 MIR34C-201ENST00000384831 77 ntBASIC1.17□□□□□ -2.22
PTCH2Q9Y6C5 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
PTCH2Q9Y6C5 RNU6-531P-201ENST00000516694 104 ntBASIC1.17□□□□□ -2.22
PTCH2Q9Y6C5 MIR4694-201ENST00000578534 80 ntBASIC1.17□□□□□ -2.22
PTCH2Q9Y6C5 AC090897.1-201ENST00000580909 226 ntBASIC1.17□□□□□ -2.22
PTCH2Q9Y6C5 MIR101-2-201ENST00000362195 79 ntBASIC1.16□□□□□ -2.22
PTCH2Q9Y6C5 RNA5SP457-201ENST00000363657 124 ntBASIC1.16□□□□□ -2.22
PTCH2Q9Y6C5 RNU6-1014P-201ENST00000383940 103 ntBASIC1.16□□□□□ -2.22
PTCH2Q9Y6C5 AC004941.2-201ENST00000427009 228 ntBASIC1.16□□□□□ -2.22
PTCH2Q9Y6C5 RNU6-448P-201ENST00000517052 107 ntBASIC1.16□□□□□ -2.22
PTCH2Q9Y6C5 AL590095.2-201ENST00000604136 117 ntBASIC1.16□□□□□ -2.22
PTCH2Q9Y6C5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
PTCH2Q9Y6C5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
PTCH2Q9Y6C5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.23
PTCH2Q9Y6C5 Y_RNA.377-201ENST00000365644 108 ntBASIC1.15□□□□□ -2.23
PTCH2Q9Y6C5 MIR605-201ENST00000385078 83 ntBASIC1.15□□□□□ -2.23
PTCH2Q9Y6C5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.15□□□□□ -2.23
PTCH2Q9Y6C5 AC008608.1-201ENST00000603910 127 ntBASIC1.15□□□□□ -2.23
PTCH2Q9Y6C5 AC096720.1-201ENST00000604441 183 ntBASIC1.15□□□□□ -2.23
PTCH2Q9Y6C5 RNY3P2-201ENST00000362918 102 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 Y_RNA.115-201ENST00000363272 98 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 SNORD38.1-201ENST00000363863 68 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 RNU4-38P-201ENST00000364472 129 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 RNU6-215P-201ENST00000365169 102 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 RNU6-1335P-201ENST00000365426 107 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 RNU6-1201P-201ENST00000384227 107 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 MIR573-201ENST00000384964 99 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 MIR532-201ENST00000385025 91 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 AL353813.1-201ENST00000440700 253 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 RNU6-919P-201ENST00000516731 104 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 Y_RNA.697-201ENST00000516776 113 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 MIR4500-201ENST00000579472 76 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 MIR4714-201ENST00000580728 77 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 AL442128.1-201ENST00000615151 90 ntBASIC1.14□□□□□ -2.23
PTCH2Q9Y6C5 HSBP1P2-201ENST00000299671 229 ntBASIC1.13□□□□□ -2.23
PTCH2Q9Y6C5 Y_RNA.68-201ENST00000362881 102 ntBASIC1.13□□□□□ -2.23
PTCH2Q9Y6C5 MIR1302-5-201ENST00000408164 150 ntBASIC1.13□□□□□ -2.23
PTCH2Q9Y6C5 SNORD99-201ENST00000408612 74 ntBASIC1.13□□□□□ -2.23
PTCH2Q9Y6C5 AC013244.2-201ENST00000603396 103 ntBASIC1.13□□□□□ -2.23
PTCH2Q9Y6C5 RNU7-10P-201ENST00000607194 63 ntBASIC1.13□□□□□ -2.23
PTCH2Q9Y6C5 MIR6857-201ENST00000613267 93 ntBASIC1.13□□□□□ -2.23
PTCH2Q9Y6C5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
PTCH2Q9Y6C5 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
PTCH2Q9Y6C5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.12□□□□□ -2.23
PTCH2Q9Y6C5 AL353765.1-201ENST00000605514 183 ntBASIC1.12□□□□□ -2.23
PTCH2Q9Y6C5 Y_RNA.10-201ENST00000362371 110 ntBASIC1.11□□□□□ -2.23
PTCH2Q9Y6C5 Y_RNA.163-201ENST00000363702 113 ntBASIC1.11□□□□□ -2.23
PTCH2Q9Y6C5 RNU4-36P-201ENST00000364294 144 ntBASIC1.11□□□□□ -2.23
PTCH2Q9Y6C5 SNORD20-201ENST00000384550 80 ntBASIC1.11□□□□□ -2.23
PTCH2Q9Y6C5 MIR577-201ENST00000385196 96 ntBASIC1.11□□□□□ -2.23
PTCH2Q9Y6C5 Y_RNA.681-201ENST00000516445 113 ntBASIC1.11□□□□□ -2.23
PTCH2Q9Y6C5 AC141557.1-201ENST00000540982 400 ntBASIC1.11□□□□□ -2.23
PTCH2Q9Y6C5 MIR4698-201ENST00000577795 80 ntBASIC1.11□□□□□ -2.23
PTCH2Q9Y6C5 RNU6-832P-201ENST00000363319 107 ntBASIC1.1□□□□□ -2.23
PTCH2Q9Y6C5 Y_RNA.174-201ENST00000363781 105 ntBASIC1.1□□□□□ -2.23
PTCH2Q9Y6C5 RNU6-571P-201ENST00000384128 107 ntBASIC1.1□□□□□ -2.23
PTCH2Q9Y6C5 Y_RNA.536-201ENST00000384621 113 ntBASIC1.1□□□□□ -2.23
PTCH2Q9Y6C5 RNY4P18-201ENST00000391107 89 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 299.6 ms