Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PCDHB9Q9Y5E1 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
PCDHB9Q9Y5E1 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
PCDHB9Q9Y5E1 SNORA18.5-201ENST00000516616 101 ntBASIC2.2□□□□□ -2.06
PCDHB9Q9Y5E1 AC104996.3-201ENST00000590718 94 ntBASIC2.2□□□□□ -2.06
PCDHB9Q9Y5E1 AC013244.2-201ENST00000603396 103 ntBASIC2.2□□□□□ -2.06
PCDHB9Q9Y5E1 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.2□□□□□ -2.06
PCDHB9Q9Y5E1 MIR101-2-201ENST00000362195 79 ntBASIC2.19□□□□□ -2.06
PCDHB9Q9Y5E1 Y_RNA.536-201ENST00000384621 113 ntBASIC2.19□□□□□ -2.06
PCDHB9Q9Y5E1 MIR635-201ENST00000384830 98 ntBASIC2.19□□□□□ -2.06
PCDHB9Q9Y5E1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.19□□□□□ -2.06
PCDHB9Q9Y5E1 TRAJ51-201ENST00000504127 63 ntBASIC2.19□□□□□ -2.06
PCDHB9Q9Y5E1 MIR3198-2-201ENST00000577868 80 ntBASIC2.19□□□□□ -2.06
PCDHB9Q9Y5E1 MIR548H5-201ENST00000580314 60 ntBASIC2.19□□□□□ -2.06
PCDHB9Q9Y5E1 RNU7-10P-201ENST00000607194 63 ntBASIC2.19□□□□□ -2.06
PCDHB9Q9Y5E1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PCDHB9Q9Y5E1 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
PCDHB9Q9Y5E1 MIRLET7A1-201ENST00000362295 80 ntBASIC2.18□□□□□ -2.06
PCDHB9Q9Y5E1 RNU6-957P-201ENST00000363652 99 ntBASIC2.18□□□□□ -2.06
PCDHB9Q9Y5E1 SNORD113.3-201ENST00000364630 78 ntBASIC2.18□□□□□ -2.06
PCDHB9Q9Y5E1 MIR548U-201ENST00000390728 81 ntBASIC2.18□□□□□ -2.06
PCDHB9Q9Y5E1 SNORD83.1-201ENST00000411362 77 ntBASIC2.18□□□□□ -2.06
PCDHB9Q9Y5E1 FGF7P7-201ENST00000514120 227 ntBASIC2.18□□□□□ -2.06
PCDHB9Q9Y5E1 MIR6082-201ENST00000613604 109 ntBASIC2.18□□□□□ -2.06
PCDHB9Q9Y5E1 U7.4-201ENST00000614961 63 ntBASIC2.18□□□□□ -2.06
PCDHB9Q9Y5E1 Y_RNA.13-201ENST00000362403 112 ntBASIC2.17□□□□□ -2.06
PCDHB9Q9Y5E1 RNU6-686P-201ENST00000364839 107 ntBASIC2.17□□□□□ -2.06
PCDHB9Q9Y5E1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PCDHB9Q9Y5E1 AC048334.1-201ENST00000477975 159 ntBASIC2.17□□□□□ -2.06
PCDHB9Q9Y5E1 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
PCDHB9Q9Y5E1 Y_RNA.660-201ENST00000516002 120 ntBASIC2.17□□□□□ -2.06
PCDHB9Q9Y5E1 AC036111.3-201ENST00000526389 112 ntBASIC2.17□□□□□ -2.06
PCDHB9Q9Y5E1 AL096840.1-201ENST00000603287 93 ntBASIC2.17□□□□□ -2.06
PCDHB9Q9Y5E1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHB9Q9Y5E1 Y_RNA.56-201ENST00000362798 112 ntBASIC2.16□□□□□ -2.06
PCDHB9Q9Y5E1 Y_RNA.491-201ENST00000384417 107 ntBASIC2.16□□□□□ -2.06
PCDHB9Q9Y5E1 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
PCDHB9Q9Y5E1 SNORA26.9-201ENST00000391322 122 ntBASIC2.16□□□□□ -2.06
PCDHB9Q9Y5E1 RNU6-765P-201ENST00000516916 99 ntBASIC2.16□□□□□ -2.06
PCDHB9Q9Y5E1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.06
PCDHB9Q9Y5E1 RNU6-934P-201ENST00000365154 107 ntBASIC2.15□□□□□ -2.07
PCDHB9Q9Y5E1 Y_RNA.330-201ENST00000365230 109 ntBASIC2.15□□□□□ -2.07
PCDHB9Q9Y5E1 SNORA75.2-201ENST00000391138 150 ntBASIC2.15□□□□□ -2.07
PCDHB9Q9Y5E1 SNORA75.3-201ENST00000391231 150 ntBASIC2.15□□□□□ -2.07
PCDHB9Q9Y5E1 RNU7-195P-201ENST00000458793 62 ntBASIC2.15□□□□□ -2.07
PCDHB9Q9Y5E1 RNU6-161P-201ENST00000363051 106 ntBASIC2.14□□□□□ -2.07
PCDHB9Q9Y5E1 MIR583-201ENST00000384846 75 ntBASIC2.14□□□□□ -2.07
PCDHB9Q9Y5E1 MIR518E-201ENST00000385252 88 ntBASIC2.14□□□□□ -2.07
PCDHB9Q9Y5E1 RNU1-78P-201ENST00000391248 165 ntBASIC2.14□□□□□ -2.07
PCDHB9Q9Y5E1 RPS27P16-201ENST00000425758 201 ntBASIC2.14□□□□□ -2.07
PCDHB9Q9Y5E1 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
PCDHB9Q9Y5E1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.14□□□□□ -2.07
PCDHB9Q9Y5E1 MIRLET7F1-201ENST00000362202 87 ntBASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 SNORA25.9-201ENST00000365087 128 ntBASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 Y_RNA.565-201ENST00000384719 101 ntBASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 MIR125B2-201ENST00000385128 89 ntBASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 RNU6-380P-201ENST00000410207 107 ntBASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 AC092628.1-201ENST00000436250 252 ntBASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 RNU6-1053P-201ENST00000515930 101 ntBASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 SNORA31.2-201ENST00000516019 134 ntBASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.13□□□□□ -2.07
PCDHB9Q9Y5E1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 Y_RNA.42-201ENST00000362660 108 ntBASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 RNU6-1260P-201ENST00000362944 107 ntBASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 AC139453.2-201ENST00000487255 133 ntBASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 Y_RNA.809-201ENST00000516058 95 ntBASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 RN7SKP88-201ENST00000516847 250 ntBASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 7SK.8-201ENST00000612110 250 ntBASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 7SK.11-201ENST00000615477 250 ntBASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 7SK.13-201ENST00000622040 250 ntBASIC2.12□□□□□ -2.07
PCDHB9Q9Y5E1 RNU1-17P-201ENST00000363022 152 ntBASIC2.11□□□□□ -2.07
PCDHB9Q9Y5E1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHB9Q9Y5E1 AC015818.7-201ENST00000428754 109 ntBASIC2.11□□□□□ -2.07
PCDHB9Q9Y5E1 RNU6-1108P-201ENST00000516308 104 ntBASIC2.11□□□□□ -2.07
PCDHB9Q9Y5E1 MIR4771-2-201ENST00000577758 74 ntBASIC2.11□□□□□ -2.07
PCDHB9Q9Y5E1 MIR4422-201ENST00000581938 83 ntBASIC2.11□□□□□ -2.07
PCDHB9Q9Y5E1 MIR4771-1-201ENST00000582617 74 ntBASIC2.11□□□□□ -2.07
PCDHB9Q9Y5E1 AC106800.4-201ENST00000614905 153 ntBASIC2.11□□□□□ -2.07
PCDHB9Q9Y5E1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHB9Q9Y5E1 Y_RNA.363-201ENST00000365529 113 ntBASIC2.1□□□□□ -2.07
PCDHB9Q9Y5E1 Y_RNA.545-201ENST00000384652 105 ntBASIC2.1□□□□□ -2.07
PCDHB9Q9Y5E1 SNORD111-201ENST00000408139 94 ntBASIC2.1□□□□□ -2.07
PCDHB9Q9Y5E1 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
PCDHB9Q9Y5E1 MIR5002-201ENST00000584713 97 ntBASIC2.1□□□□□ -2.07
PCDHB9Q9Y5E1 TRDV1-202ENST00000621643 102 ntBASIC2.1□□□□□ -2.07
PCDHB9Q9Y5E1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PCDHB9Q9Y5E1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PCDHB9Q9Y5E1 MIR520H-201ENST00000385126 88 ntBASIC2.09□□□□□ -2.07
PCDHB9Q9Y5E1 SNORD77.2-201ENST00000391045 68 ntBASIC2.09□□□□□ -2.07
PCDHB9Q9Y5E1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHB9Q9Y5E1 AC008834.1-201ENST00000511612 175 ntBASIC2.09□□□□□ -2.07
PCDHB9Q9Y5E1 RNU6-448P-201ENST00000517052 107 ntBASIC2.09□□□□□ -2.07
PCDHB9Q9Y5E1 Y_RNA.788-201ENST00000622394 112 ntBASIC2.09□□□□□ -2.07
PCDHB9Q9Y5E1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHB9Q9Y5E1 Y_RNA.226-201ENST00000364337 114 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 264.3 ms