Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL591704.2-201ENST00000421658 181 ntBASIC1.44□□□□□ -2.18
CTDP1Q9Y5B0 MIR4500-201ENST00000579472 76 ntBASIC1.44□□□□□ -2.18
CTDP1Q9Y5B0 AC090897.1-201ENST00000580909 226 ntBASIC1.44□□□□□ -2.18
CTDP1Q9Y5B0 MIR6504-201ENST00000613520 61 ntBASIC1.44□□□□□ -2.18
CTDP1Q9Y5B0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CTDP1Q9Y5B0 Y_RNA.119-201ENST00000363301 96 ntBASIC1.43□□□□□ -2.18
CTDP1Q9Y5B0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.43□□□□□ -2.18
CTDP1Q9Y5B0 RNU6-910P-201ENST00000390844 107 ntBASIC1.43□□□□□ -2.18
CTDP1Q9Y5B0 MIR1276-201ENST00000408707 83 ntBASIC1.43□□□□□ -2.18
CTDP1Q9Y5B0 RNA5SP102-201ENST00000516865 106 ntBASIC1.43□□□□□ -2.18
CTDP1Q9Y5B0 AC103810.7-201ENST00000607821 91 ntBASIC1.43□□□□□ -2.18
CTDP1Q9Y5B0 AC023934.1-201ENST00000574529 2389 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 HSBP1P2-201ENST00000299671 229 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 Y_RNA.191-201ENST00000363972 113 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 RNU1-36P-201ENST00000365130 165 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 RNU6-1134P-201ENST00000365156 101 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 SNORA80D-201ENST00000384488 135 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 SNORD83.1-201ENST00000411362 77 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 snoU13.21-201ENST00000459368 105 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 AC026421.1-201ENST00000519101 163 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 AC036111.3-201ENST00000526389 112 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.42□□□□□ -2.18
CTDP1Q9Y5B0 RNU6-403P-201ENST00000363163 104 ntBASIC1.41□□□□□ -2.18
CTDP1Q9Y5B0 RNU6-1244P-201ENST00000363614 108 ntBASIC1.41□□□□□ -2.18
CTDP1Q9Y5B0 Y_RNA.173-201ENST00000363776 113 ntBASIC1.41□□□□□ -2.18
CTDP1Q9Y5B0 RNU6-934P-201ENST00000365154 107 ntBASIC1.41□□□□□ -2.18
CTDP1Q9Y5B0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.41□□□□□ -2.18
CTDP1Q9Y5B0 SNORD111-201ENST00000408139 94 ntBASIC1.41□□□□□ -2.18
CTDP1Q9Y5B0 SNORA72.7-201ENST00000516349 94 ntBASIC1.41□□□□□ -2.18
CTDP1Q9Y5B0 AC023827.1-201ENST00000569247 97 ntBASIC1.41□□□□□ -2.18
CTDP1Q9Y5B0 MIR4491-201ENST00000581087 68 ntBASIC1.41□□□□□ -2.18
CTDP1Q9Y5B0 SNORD116-10-201ENST00000363791 102 ntBASIC1.4□□□□□ -2.19
CTDP1Q9Y5B0 SNORD73B-201ENST00000364394 72 ntBASIC1.4□□□□□ -2.19
CTDP1Q9Y5B0 SNORA72.6-201ENST00000384520 129 ntBASIC1.4□□□□□ -2.19
CTDP1Q9Y5B0 MIR1257-201ENST00000408490 117 ntBASIC1.4□□□□□ -2.19
CTDP1Q9Y5B0 RNU7-185P-201ENST00000459215 60 ntBASIC1.4□□□□□ -2.19
CTDP1Q9Y5B0 RNU7-21P-201ENST00000459430 62 ntBASIC1.4□□□□□ -2.19
CTDP1Q9Y5B0 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.4□□□□□ -2.19
CTDP1Q9Y5B0 AC106800.4-201ENST00000614905 153 ntBASIC1.4□□□□□ -2.19
CTDP1Q9Y5B0 RNA5SP327-201ENST00000362494 101 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 RNU6-1125P-201ENST00000363601 107 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 Y_RNA.190-201ENST00000363964 101 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 SNORD58A-201ENST00000383875 65 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 RNU6-480P-201ENST00000384332 107 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 RNU4-83P-201ENST00000410863 133 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 RNU7-90P-201ENST00000459216 62 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 SNORA70.22-201ENST00000517160 124 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 MIR4295-201ENST00000585286 85 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 AC008163.1-202ENST00000636004 2889 ntBASIC1.39□□□□□ -2.19
CTDP1Q9Y5B0 RNU4-58P-201ENST00000363192 141 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 Y_RNA.588-201ENST00000391254 102 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 MIR1302-4-201ENST00000408701 150 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 BX276092.1-201ENST00000427368 251 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 SNRPGP12-201ENST00000449481 213 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 SNORD79.1-201ENST00000516069 84 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 RNU6-531P-201ENST00000516694 104 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 SNORA25.16-201ENST00000516741 121 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 MIR4771-2-201ENST00000577758 74 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 MIR4771-1-201ENST00000582617 74 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 MIR4452-201ENST00000583004 71 ntBASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
CTDP1Q9Y5B0 MIR181B2-201ENST00000385004 89 ntBASIC1.37□□□□□ -2.19
CTDP1Q9Y5B0 AC015818.7-201ENST00000428754 109 ntBASIC1.37□□□□□ -2.19
CTDP1Q9Y5B0 AC087499.7-201ENST00000441958 109 ntBASIC1.37□□□□□ -2.19
CTDP1Q9Y5B0 AC087343.1-201ENST00000477341 475 ntBASIC1.37□□□□□ -2.19
CTDP1Q9Y5B0 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
CTDP1Q9Y5B0 RNU6-762P-201ENST00000517107 102 ntBASIC1.37□□□□□ -2.19
CTDP1Q9Y5B0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.37□□□□□ -2.19
CTDP1Q9Y5B0 RNU1-124P-201ENST00000363861 145 ntBASIC1.36□□□□□ -2.19
CTDP1Q9Y5B0 RNU6-571P-201ENST00000384128 107 ntBASIC1.36□□□□□ -2.19
CTDP1Q9Y5B0 RNU6-994P-201ENST00000410507 111 ntBASIC1.36□□□□□ -2.19
CTDP1Q9Y5B0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.36□□□□□ -2.19
CTDP1Q9Y5B0 RNU6-850P-201ENST00000516934 103 ntBASIC1.36□□□□□ -2.19
CTDP1Q9Y5B0 RNA5SP404-201ENST00000517118 132 ntBASIC1.36□□□□□ -2.19
CTDP1Q9Y5B0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CTDP1Q9Y5B0 Y_RNA.57-201ENST00000362806 113 ntBASIC1.35□□□□□ -2.19
CTDP1Q9Y5B0 MIR222-201ENST00000384992 110 ntBASIC1.35□□□□□ -2.19
CTDP1Q9Y5B0 MIR518E-201ENST00000385252 88 ntBASIC1.35□□□□□ -2.19
CTDP1Q9Y5B0 AL078603.1-201ENST00000603824 313 ntBASIC1.35□□□□□ -2.19
CTDP1Q9Y5B0 MIR7111-201ENST00000619751 72 ntBASIC1.35□□□□□ -2.19
CTDP1Q9Y5B0 Y_RNA.17-201ENST00000362433 111 ntBASIC1.34□□□□□ -2.19
CTDP1Q9Y5B0 MIR450A2-201ENST00000385022 100 ntBASIC1.34□□□□□ -2.19
CTDP1Q9Y5B0 MIR125B2-201ENST00000385128 89 ntBASIC1.34□□□□□ -2.19
CTDP1Q9Y5B0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CTDP1Q9Y5B0 SNORA26.2-201ENST00000390922 122 ntBASIC1.34□□□□□ -2.19
CTDP1Q9Y5B0 RPS26P5-201ENST00000418544 335 ntBASIC1.34□□□□□ -2.19
CTDP1Q9Y5B0 AL513043.2-201ENST00000573941 143 ntBASIC1.34□□□□□ -2.19
CTDP1Q9Y5B0 AC020891.4-201ENST00000605745 93 ntBASIC1.34□□□□□ -2.19
CTDP1Q9Y5B0 MIR8066-201ENST00000617280 78 ntBASIC1.34□□□□□ -2.19
CTDP1Q9Y5B0 AC027335.2-201ENST00000624030 375 ntBASIC1.34□□□□□ -2.19
CTDP1Q9Y5B0 MIR101-2-201ENST00000362195 79 ntBASIC1.33□□□□□ -2.2
CTDP1Q9Y5B0 Y_RNA.13-201ENST00000362403 112 ntBASIC1.33□□□□□ -2.2
CTDP1Q9Y5B0 Y_RNA.118-201ENST00000363300 101 ntBASIC1.33□□□□□ -2.2
CTDP1Q9Y5B0 SNORD114-27-201ENST00000363766 70 ntBASIC1.33□□□□□ -2.2
CTDP1Q9Y5B0 SNORA25-201ENST00000384384 134 ntBASIC1.33□□□□□ -2.2
CTDP1Q9Y5B0 SNORD116-22-201ENST00000384430 92 ntBASIC1.33□□□□□ -2.2
CTDP1Q9Y5B0 Y_RNA.508-201ENST00000384502 114 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms