Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC008267.6-201ENST00000441664 139 ntBASIC0.95□□□□□ -2.26
USP35Q9P2H5 RNU6-479P-201ENST00000516348 105 ntBASIC0.95□□□□□ -2.26
USP35Q9P2H5 MIR4491-201ENST00000581087 68 ntBASIC0.95□□□□□ -2.26
USP35Q9P2H5 MIR6082-201ENST00000613604 109 ntBASIC0.95□□□□□ -2.26
USP35Q9P2H5 AC087741.2-201ENST00000619415 172 ntBASIC0.95□□□□□ -2.26
USP35Q9P2H5 Y_RNA.563-201ENST00000384707 108 ntBASIC0.94□□□□□ -2.26
USP35Q9P2H5 MIR140-201ENST00000385282 100 ntBASIC0.94□□□□□ -2.26
USP35Q9P2H5 RNU6-1154P-201ENST00000391001 104 ntBASIC0.94□□□□□ -2.26
USP35Q9P2H5 RNU4-69P-201ENST00000410677 143 ntBASIC0.94□□□□□ -2.26
USP35Q9P2H5 RNU6-62P-201ENST00000516526 102 ntBASIC0.94□□□□□ -2.26
USP35Q9P2H5 RNU7-6P-201ENST00000516845 62 ntBASIC0.94□□□□□ -2.26
USP35Q9P2H5 AC018659.1-201ENST00000551083 169 ntBASIC0.94□□□□□ -2.26
USP35Q9P2H5 AL359881.1-201ENST00000602916 267 ntBASIC0.94□□□□□ -2.26
USP35Q9P2H5 Y_RNA.773-201ENST00000607168 90 ntBASIC0.94□□□□□ -2.26
USP35Q9P2H5 RNA5SP347-201ENST00000362445 119 ntBASIC0.93□□□□□ -2.26
USP35Q9P2H5 SNORA36.2-201ENST00000384004 127 ntBASIC0.93□□□□□ -2.26
USP35Q9P2H5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.93□□□□□ -2.26
USP35Q9P2H5 AC243829.3-201ENST00000622177 108 ntBASIC0.93□□□□□ -2.26
USP35Q9P2H5 MIR330-201ENST00000362196 94 ntBASIC0.92□□□□□ -2.26
USP35Q9P2H5 MIR548A1-201ENST00000385041 97 ntBASIC0.92□□□□□ -2.26
USP35Q9P2H5 MIR548I2-201ENST00000408348 149 ntBASIC0.92□□□□□ -2.26
USP35Q9P2H5 RNU2-51P-201ENST00000410708 197 ntBASIC0.92□□□□□ -2.26
USP35Q9P2H5 RNU6-403P-201ENST00000363163 104 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 RNA5SP117-201ENST00000365294 118 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 Y_RNA.344-201ENST00000365381 112 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 Y_RNA.346-201ENST00000365385 112 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 RNU6-616P-201ENST00000384353 107 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 Y_RNA.549-201ENST00000384657 102 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 RNU6-1307P-201ENST00000391012 103 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 RNU6-1194P-201ENST00000516208 104 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 RNU6-313P-201ENST00000516317 112 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 SNORD67.1-201ENST00000516618 108 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.91□□□□□ -2.26
USP35Q9P2H5 Y_RNA.13-201ENST00000362403 112 ntBASIC0.9□□□□□ -2.27
USP35Q9P2H5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.9□□□□□ -2.27
USP35Q9P2H5 Y_RNA.649-201ENST00000459077 103 ntBASIC0.9□□□□□ -2.27
USP35Q9P2H5 AL035470.1-201ENST00000622571 220 ntBASIC0.9□□□□□ -2.27
USP35Q9P2H5 MIR1255B1-201ENST00000636325 63 ntBASIC0.9□□□□□ -2.27
USP35Q9P2H5 RNU6-1290P-201ENST00000362957 109 ntBASIC0.89□□□□□ -2.27
USP35Q9P2H5 SNORD114-10-201ENST00000363409 72 ntBASIC0.89□□□□□ -2.27
USP35Q9P2H5 Y_RNA.213-201ENST00000364178 111 ntBASIC0.89□□□□□ -2.27
USP35Q9P2H5 RNU6-429P-201ENST00000384582 108 ntBASIC0.89□□□□□ -2.27
USP35Q9P2H5 MIR3163-201ENST00000581592 73 ntBASIC0.89□□□□□ -2.27
USP35Q9P2H5 AC105081.1-201ENST00000617727 106 ntBASIC0.89□□□□□ -2.27
USP35Q9P2H5 U6.95-201ENST00000636931 70 ntBASIC0.89□□□□□ -2.27
USP35Q9P2H5 RNA5SP499-201ENST00000363982 119 ntBASIC0.88□□□□□ -2.27
USP35Q9P2H5 Y_RNA.291-201ENST00000364886 113 ntBASIC0.88□□□□□ -2.27
USP35Q9P2H5 MIR548D2-201ENST00000384955 97 ntBASIC0.88□□□□□ -2.27
USP35Q9P2H5 RNU6-229P-201ENST00000516614 102 ntBASIC0.88□□□□□ -2.27
USP35Q9P2H5 RNU7-137P-201ENST00000516788 62 ntBASIC0.88□□□□□ -2.27
USP35Q9P2H5 AC007012.1-201ENST00000567192 175 ntBASIC0.88□□□□□ -2.27
USP35Q9P2H5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.88□□□□□ -2.27
USP35Q9P2H5 SNORD115-19-201ENST00000363098 82 ntBASIC0.87□□□□□ -2.27
USP35Q9P2H5 SNORD115-18-201ENST00000363293 82 ntBASIC0.87□□□□□ -2.27
USP35Q9P2H5 SNORD115-17-201ENST00000364612 82 ntBASIC0.87□□□□□ -2.27
USP35Q9P2H5 Y_RNA.362-201ENST00000365518 110 ntBASIC0.87□□□□□ -2.27
USP35Q9P2H5 MIR548A3-201ENST00000385297 97 ntBASIC0.87□□□□□ -2.27
USP35Q9P2H5 RN7SKP12-201ENST00000516275 143 ntBASIC0.87□□□□□ -2.27
USP35Q9P2H5 RNU4-54P-201ENST00000516428 129 ntBASIC0.87□□□□□ -2.27
USP35Q9P2H5 MTND5P34-201ENST00000568888 325 ntBASIC0.87□□□□□ -2.27
USP35Q9P2H5 MIR6129-201ENST00000616087 109 ntBASIC0.87□□□□□ -2.27
USP35Q9P2H5 MIR6086-201ENST00000638065 55 ntBASIC0.87□□□□□ -2.27
USP35Q9P2H5 Y_RNA.35-201ENST00000362601 101 ntBASIC0.86□□□□□ -2.27
USP35Q9P2H5 RNY4P6-201ENST00000363667 96 ntBASIC0.86□□□□□ -2.27
USP35Q9P2H5 RNU6-945P-201ENST00000383947 107 ntBASIC0.86□□□□□ -2.27
USP35Q9P2H5 RNU6-1144P-201ENST00000384247 104 ntBASIC0.86□□□□□ -2.27
USP35Q9P2H5 MIR206-201ENST00000384872 86 ntBASIC0.86□□□□□ -2.27
USP35Q9P2H5 MIR759-201ENST00000390224 91 ntBASIC0.86□□□□□ -2.27
USP35Q9P2H5 SNORD77B-201ENST00000391112 67 ntBASIC0.86□□□□□ -2.27
USP35Q9P2H5 AL353813.1-201ENST00000440700 253 ntBASIC0.86□□□□□ -2.27
USP35Q9P2H5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.86□□□□□ -2.27
USP35Q9P2H5 AL670379.3-201ENST00000605040 251 ntBASIC0.86□□□□□ -2.27
USP35Q9P2H5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
USP35Q9P2H5 Y_RNA.174-201ENST00000363781 105 ntBASIC0.85□□□□□ -2.27
USP35Q9P2H5 SNORA72.6-201ENST00000384520 129 ntBASIC0.85□□□□□ -2.27
USP35Q9P2H5 RNU6-476P-201ENST00000384726 107 ntBASIC0.85□□□□□ -2.27
USP35Q9P2H5 RNU6-1321P-201ENST00000390905 107 ntBASIC0.85□□□□□ -2.27
USP35Q9P2H5 RNU6-1064P-201ENST00000410626 104 ntBASIC0.85□□□□□ -2.27
USP35Q9P2H5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.85□□□□□ -2.27
USP35Q9P2H5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
USP35Q9P2H5 SNORD115-35-201ENST00000365122 82 ntBASIC0.84□□□□□ -2.27
USP35Q9P2H5 RNY1P8-201ENST00000383970 114 ntBASIC0.84□□□□□ -2.27
USP35Q9P2H5 SNORD116-21-201ENST00000384507 92 ntBASIC0.84□□□□□ -2.27
USP35Q9P2H5 RNU6-1081P-201ENST00000384537 107 ntBASIC0.84□□□□□ -2.27
USP35Q9P2H5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
USP35Q9P2H5 RNU6-521P-201ENST00000516663 105 ntBASIC0.84□□□□□ -2.27
USP35Q9P2H5 RNU6-135P-201ENST00000516769 101 ntBASIC0.84□□□□□ -2.27
USP35Q9P2H5 MIR4679-2-201ENST00000578358 77 ntBASIC0.84□□□□□ -2.27
USP35Q9P2H5 RNU4-58P-201ENST00000363192 141 ntBASIC0.83□□□□□ -2.28
USP35Q9P2H5 SNORA63.5-201ENST00000363548 123 ntBASIC0.83□□□□□ -2.28
USP35Q9P2H5 RNU7-2P-201ENST00000516096 62 ntBASIC0.83□□□□□ -2.28
USP35Q9P2H5 SNORA25.16-201ENST00000516741 121 ntBASIC0.83□□□□□ -2.28
USP35Q9P2H5 AC138749.4-201ENST00000563970 127 ntBASIC0.83□□□□□ -2.28
USP35Q9P2H5 MIR2909-201ENST00000617113 69 ntBASIC0.83□□□□□ -2.28
USP35Q9P2H5 RNU6-363P-201ENST00000362895 105 ntBASIC0.82□□□□□ -2.28
USP35Q9P2H5 Y_RNA.448-201ENST00000384185 108 ntBASIC0.82□□□□□ -2.28
USP35Q9P2H5 RNU6-679P-201ENST00000391003 106 ntBASIC0.82□□□□□ -2.28
USP35Q9P2H5 AC092628.1-201ENST00000436250 252 ntBASIC0.82□□□□□ -2.28
USP35Q9P2H5 uc_338.16-201ENST00000621804 95 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 258.7 ms