Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.85□□□□□ -2.27
LRFN1Q9P244 AC138749.4-201ENST00000563970 127 ntBASIC0.85□□□□□ -2.27
LRFN1Q9P244 AC133485.1-201ENST00000567176 124 ntBASIC0.85□□□□□ -2.27
LRFN1Q9P244 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
LRFN1Q9P244 MIR6129-201ENST00000616087 109 ntBASIC0.85□□□□□ -2.27
LRFN1Q9P244 AL162726.3-218ENST00000636401 95 ntBASIC0.85□□□□□ -2.27
LRFN1Q9P244 Y_RNA.85-201ENST00000363014 111 ntBASIC0.84□□□□□ -2.27
LRFN1Q9P244 RNU4-67P-201ENST00000364569 141 ntBASIC0.84□□□□□ -2.27
LRFN1Q9P244 Y_RNA.328-201ENST00000365208 113 ntBASIC0.84□□□□□ -2.27
LRFN1Q9P244 RNU6-880P-201ENST00000384526 107 ntBASIC0.84□□□□□ -2.27
LRFN1Q9P244 Y_RNA.629-201ENST00000411368 105 ntBASIC0.84□□□□□ -2.27
LRFN1Q9P244 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.84□□□□□ -2.27
LRFN1Q9P244 RNU7-48P-201ENST00000458875 63 ntBASIC0.84□□□□□ -2.27
LRFN1Q9P244 SNORA25.16-201ENST00000516741 121 ntBASIC0.84□□□□□ -2.27
LRFN1Q9P244 AC011195.1-201ENST00000578177 177 ntBASIC0.84□□□□□ -2.27
LRFN1Q9P244 SNORD92-201ENST00000585078 85 ntBASIC0.84□□□□□ -2.27
LRFN1Q9P244 MIR8066-201ENST00000617280 78 ntBASIC0.84□□□□□ -2.27
LRFN1Q9P244 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.84□□□□□ -2.27
LRFN1Q9P244 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.28
LRFN1Q9P244 Y_RNA.13-201ENST00000362403 112 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 Y_RNA.98-201ENST00000363109 102 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 RNA5SP133-201ENST00000363368 119 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 Y_RNA.281-201ENST00000364774 94 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 RNY1P2-201ENST00000364820 117 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 Y_RNA.507-201ENST00000384500 99 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
LRFN1Q9P244 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.83□□□□□ -2.28
LRFN1Q9P244 RNU7-102P-201ENST00000458948 62 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 AC008608.1-201ENST00000603910 127 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 U6.109-201ENST00000636749 87 ntBASIC0.83□□□□□ -2.28
LRFN1Q9P244 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
LRFN1Q9P244 Y_RNA.119-201ENST00000363301 96 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 Y_RNA.155-201ENST00000363632 101 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 Y_RNA.309-201ENST00000365046 111 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 Y_RNA.374-201ENST00000365606 101 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 RNU6-409P-201ENST00000384114 104 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 SNORA72.6-201ENST00000384520 129 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 MIR1912-201ENST00000410389 80 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 AL353813.1-201ENST00000440700 253 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.82□□□□□ -2.28
LRFN1Q9P244 AC068339.1-201ENST00000526965 141 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 MIR6082-201ENST00000613604 109 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 MIR376B-201ENST00000614515 100 ntBASIC0.82□□□□□ -2.28
LRFN1Q9P244 Y_RNA.42-201ENST00000362660 108 ntBASIC0.81□□□□□ -2.28
LRFN1Q9P244 RNU6-865P-201ENST00000364772 107 ntBASIC0.81□□□□□ -2.28
LRFN1Q9P244 MIR34C-201ENST00000384831 77 ntBASIC0.81□□□□□ -2.28
LRFN1Q9P244 RNU6-679P-201ENST00000391003 106 ntBASIC0.81□□□□□ -2.28
LRFN1Q9P244 RNU6-733P-201ENST00000410759 104 ntBASIC0.81□□□□□ -2.28
LRFN1Q9P244 RNU6-531P-201ENST00000516694 104 ntBASIC0.81□□□□□ -2.28
LRFN1Q9P244 DEFB131E-201ENST00000532329 154 ntBASIC0.81□□□□□ -2.28
LRFN1Q9P244 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LRFN1Q9P244 RNU6-1325P-201ENST00000364905 105 ntBASIC0.8□□□□□ -2.28
LRFN1Q9P244 U8.6-201ENST00000364939 135 ntBASIC0.8□□□□□ -2.28
LRFN1Q9P244 RNU6-412P-201ENST00000516434 106 ntBASIC0.8□□□□□ -2.28
LRFN1Q9P244 RNU6-589P-201ENST00000516485 107 ntBASIC0.8□□□□□ -2.28
LRFN1Q9P244 MIR5009-201ENST00000578736 100 ntBASIC0.8□□□□□ -2.28
LRFN1Q9P244 AC090897.1-201ENST00000580909 226 ntBASIC0.8□□□□□ -2.28
LRFN1Q9P244 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
LRFN1Q9P244 AP001362.1-201ENST00000625165 124 ntBASIC0.8□□□□□ -2.28
LRFN1Q9P244 AL512310.12-203ENST00000640543 90 ntBASIC0.8□□□□□ -2.28
LRFN1Q9P244 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LRFN1Q9P244 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
LRFN1Q9P244 Y_RNA.49-201ENST00000362714 112 ntBASIC0.79□□□□□ -2.28
LRFN1Q9P244 RNU4-58P-201ENST00000363192 141 ntBASIC0.79□□□□□ -2.28
LRFN1Q9P244 RNU6-1107P-201ENST00000364817 104 ntBASIC0.79□□□□□ -2.28
LRFN1Q9P244 Y_RNA.360-201ENST00000365512 102 ntBASIC0.79□□□□□ -2.28
LRFN1Q9P244 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.79□□□□□ -2.28
LRFN1Q9P244 RNU6-1018P-201ENST00000516577 106 ntBASIC0.79□□□□□ -2.28
LRFN1Q9P244 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.79□□□□□ -2.28
LRFN1Q9P244 MIR4500-201ENST00000579472 76 ntBASIC0.79□□□□□ -2.28
LRFN1Q9P244 MIR4714-201ENST00000580728 77 ntBASIC0.79□□□□□ -2.28
LRFN1Q9P244 Y_RNA.323-201ENST00000365157 109 ntBASIC0.78□□□□□ -2.28
LRFN1Q9P244 RNU4-45P-201ENST00000365469 141 ntBASIC0.78□□□□□ -2.28
LRFN1Q9P244 RNU6-1014P-201ENST00000383940 103 ntBASIC0.78□□□□□ -2.28
LRFN1Q9P244 SNORD20-201ENST00000384550 80 ntBASIC0.78□□□□□ -2.28
LRFN1Q9P244 SNORD100-201ENST00000408573 76 ntBASIC0.78□□□□□ -2.28
LRFN1Q9P244 RNA5SP222-201ENST00000411039 105 ntBASIC0.78□□□□□ -2.28
LRFN1Q9P244 RNU6-765P-201ENST00000516916 99 ntBASIC0.78□□□□□ -2.28
LRFN1Q9P244 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
LRFN1Q9P244 RNU6-1313P-201ENST00000362622 102 ntBASIC0.77□□□□□ -2.29
LRFN1Q9P244 Y_RNA.709-201ENST00000516952 92 ntBASIC0.77□□□□□ -2.29
LRFN1Q9P244 RNU6-448P-201ENST00000517052 107 ntBASIC0.77□□□□□ -2.29
LRFN1Q9P244 RNU6-215P-201ENST00000365169 102 ntBASIC0.76□□□□□ -2.29
LRFN1Q9P244 MIR193B-201ENST00000384907 83 ntBASIC0.76□□□□□ -2.29
LRFN1Q9P244 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.76□□□□□ -2.29
LRFN1Q9P244 RNU6-1194P-201ENST00000516208 104 ntBASIC0.76□□□□□ -2.29
LRFN1Q9P244 RNU6-1006P-201ENST00000516998 103 ntBASIC0.76□□□□□ -2.29
LRFN1Q9P244 MIR3612-201ENST00000579753 87 ntBASIC0.76□□□□□ -2.29
LRFN1Q9P244 Y_RNA.247-201ENST00000364500 92 ntBASIC0.75□□□□□ -2.29
LRFN1Q9P244 RNU6-1201P-201ENST00000384227 107 ntBASIC0.75□□□□□ -2.29
LRFN1Q9P244 MIR577-201ENST00000385196 96 ntBASIC0.75□□□□□ -2.29
LRFN1Q9P244 RNY4P18-201ENST00000391107 89 ntBASIC0.75□□□□□ -2.29
LRFN1Q9P244 AC002350.1-201ENST00000490759 375 ntBASIC0.75□□□□□ -2.29
LRFN1Q9P244 Y_RNA.697-201ENST00000516776 113 ntBASIC0.75□□□□□ -2.29
LRFN1Q9P244 AP003327.1-201ENST00000529684 127 ntBASIC0.75□□□□□ -2.29
LRFN1Q9P244 AL442128.1-201ENST00000615151 90 ntBASIC0.75□□□□□ -2.29
LRFN1Q9P244 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.75□□□□□ -2.29
LRFN1Q9P244 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms