Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MIR34C-201ENST00000384831 77 ntBASIC0.81□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-679P-201ENST00000391003 106 ntBASIC0.81□□□□□ -2.28
SMARCAL1Q9NZC9 SNORD99-201ENST00000408612 74 ntBASIC0.81□□□□□ -2.28
SMARCAL1Q9NZC9 AL353813.1-201ENST00000440700 253 ntBASIC0.81□□□□□ -2.28
SMARCAL1Q9NZC9 MIR6082-201ENST00000613604 109 ntBASIC0.81□□□□□ -2.28
SMARCAL1Q9NZC9 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.85-201ENST00000363014 111 ntBASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.98-201ENST00000363109 102 ntBASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 RNY1P2-201ENST00000364820 117 ntBASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-409P-201ENST00000384114 104 ntBASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 AC022709.1-201ENST00000615967 87 ntBASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 AL512310.12-203ENST00000640543 90 ntBASIC0.8□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-834P-201ENST00000362367 110 ntBASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.273-201ENST00000364703 102 ntBASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 U8.6-201ENST00000364939 135 ntBASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-733P-201ENST00000410759 104 ntBASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 AC068339.1-201ENST00000526965 141 ntBASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 MIR4500-201ENST00000579472 76 ntBASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 AC090897.1-201ENST00000580909 226 ntBASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 AC025627.3-201ENST00000582078 182 ntBASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.281-201ENST00000364774 94 ntBASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 RNU6-1325P-201ENST00000364905 105 ntBASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.309-201ENST00000365046 111 ntBASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 MIR548J-201ENST00000408833 112 ntBASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 MIR1912-201ENST00000410389 80 ntBASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 Y_RNA.629-201ENST00000411368 105 ntBASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 RNA5SP480-201ENST00000516840 109 ntBASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 AC011195.1-201ENST00000578177 177 ntBASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 AP001362.1-201ENST00000625165 124 ntBASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
SMARCAL1Q9NZC9 RNU4-58P-201ENST00000363192 141 ntBASIC0.77□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-1107P-201ENST00000364817 104 ntBASIC0.77□□□□□ -2.29
SMARCAL1Q9NZC9 Y_RNA.360-201ENST00000365512 102 ntBASIC0.77□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-589P-201ENST00000516485 107 ntBASIC0.77□□□□□ -2.29
SMARCAL1Q9NZC9 MIR5009-201ENST00000578736 100 ntBASIC0.77□□□□□ -2.29
SMARCAL1Q9NZC9 Y_RNA.247-201ENST00000364500 92 ntBASIC0.76□□□□□ -2.29
SMARCAL1Q9NZC9 SNORD20-201ENST00000384550 80 ntBASIC0.76□□□□□ -2.29
SMARCAL1Q9NZC9 MIR598-201ENST00000384868 97 ntBASIC0.76□□□□□ -2.29
SMARCAL1Q9NZC9 MIR7-2-201ENST00000384970 110 ntBASIC0.76□□□□□ -2.29
SMARCAL1Q9NZC9 BX276092.1-201ENST00000427368 251 ntBASIC0.76□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-412P-201ENST00000516434 106 ntBASIC0.76□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-448P-201ENST00000517052 107 ntBASIC0.76□□□□□ -2.29
SMARCAL1Q9NZC9 AL353765.1-201ENST00000605514 183 ntBASIC0.76□□□□□ -2.29
SMARCAL1Q9NZC9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-1313P-201ENST00000362622 102 ntBASIC0.75□□□□□ -2.29
SMARCAL1Q9NZC9 Y_RNA.49-201ENST00000362714 112 ntBASIC0.75□□□□□ -2.29
SMARCAL1Q9NZC9 MIR577-201ENST00000385196 96 ntBASIC0.75□□□□□ -2.29
SMARCAL1Q9NZC9 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
SMARCAL1Q9NZC9 AC244098.3-201ENST00000424803 96 ntBASIC0.75□□□□□ -2.29
SMARCAL1Q9NZC9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.75□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-765P-201ENST00000516916 99 ntBASIC0.75□□□□□ -2.29
SMARCAL1Q9NZC9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.75□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-1014P-201ENST00000383940 103 ntBASIC0.74□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-1201P-201ENST00000384227 107 ntBASIC0.74□□□□□ -2.29
SMARCAL1Q9NZC9 MIR608-201ENST00000384820 100 ntBASIC0.74□□□□□ -2.29
SMARCAL1Q9NZC9 MIR573-201ENST00000384964 99 ntBASIC0.74□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.74□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.74□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-1018P-201ENST00000516577 106 ntBASIC0.74□□□□□ -2.29
SMARCAL1Q9NZC9 Y_RNA.709-201ENST00000516952 92 ntBASIC0.74□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-1006P-201ENST00000516998 103 ntBASIC0.74□□□□□ -2.29
SMARCAL1Q9NZC9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 MIR101-2-201ENST00000362195 79 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 Y_RNA.323-201ENST00000365157 109 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-291P-201ENST00000384720 107 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-535P-201ENST00000384722 107 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 AC002350.1-201ENST00000490759 375 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 MIR3612-201ENST00000579753 87 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 MIR3613-201ENST00000579844 87 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 AL442128.1-201ENST00000615151 90 ntBASIC0.73□□□□□ -2.29
SMARCAL1Q9NZC9 RNA5SP245-201ENST00000364239 121 ntBASIC0.72□□□□□ -2.29
SMARCAL1Q9NZC9 RNU6-215P-201ENST00000365169 102 ntBASIC0.72□□□□□ -2.29
SMARCAL1Q9NZC9 RNY4P18-201ENST00000391107 89 ntBASIC0.72□□□□□ -2.29
SMARCAL1Q9NZC9 SNORD100-201ENST00000408573 76 ntBASIC0.72□□□□□ -2.29
SMARCAL1Q9NZC9 AP003327.1-201ENST00000529684 127 ntBASIC0.72□□□□□ -2.29
SMARCAL1Q9NZC9 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
SMARCAL1Q9NZC9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.72□□□□□ -2.29
SMARCAL1Q9NZC9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
SMARCAL1Q9NZC9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 RNU6-832P-201ENST00000363319 107 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 RNU6-1099P-201ENST00000363533 107 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 RNA5SP117-201ENST00000365294 118 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 Y_RNA.540-201ENST00000384638 111 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 SNORA19.1-201ENST00000410656 129 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 RNA5SP222-201ENST00000411039 105 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 SPINT5P-201ENST00000448174 155 ntBASIC0.71□□□□□ -2.3
SMARCAL1Q9NZC9 SNORA31.14-201ENST00000516728 116 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms