Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 SNORA25.16-201ENST00000516741 121 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 RNU7-156P-201ENST00000517214 74 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 MIR5009-201ENST00000578736 100 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 RNU6-1313P-201ENST00000362622 102 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.98-201ENST00000363109 102 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 RNA5SP133-201ENST00000363368 119 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 RNA5SP325-201ENST00000363756 130 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 RNU6-409P-201ENST00000384114 104 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 MIR34C-201ENST00000384831 77 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 RNU6-733P-201ENST00000410759 104 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 AC008608.1-201ENST00000603910 127 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 U6.109-201ENST00000636749 87 ntBASIC0.99□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.98□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.49-201ENST00000362714 112 ntBASIC0.98□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.155-201ENST00000363632 101 ntBASIC0.98□□□□□ -2.25
USP29Q9HBJ7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.360-201ENST00000365512 102 ntBASIC0.98□□□□□ -2.25
USP29Q9HBJ7 RNU6-1014P-201ENST00000383940 103 ntBASIC0.98□□□□□ -2.25
USP29Q9HBJ7 RNU7-102P-201ENST00000458948 62 ntBASIC0.98□□□□□ -2.25
USP29Q9HBJ7 RNU6-1006P-201ENST00000516998 103 ntBASIC0.98□□□□□ -2.25
USP29Q9HBJ7 MIR6082-201ENST00000613604 109 ntBASIC0.98□□□□□ -2.25
USP29Q9HBJ7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
USP29Q9HBJ7 RNU6-403P-201ENST00000363163 104 ntBASIC0.97□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.119-201ENST00000363301 96 ntBASIC0.97□□□□□ -2.25
USP29Q9HBJ7 RNU6-865P-201ENST00000364772 107 ntBASIC0.97□□□□□ -2.25
USP29Q9HBJ7 MIR520F-201ENST00000384824 87 ntBASIC0.97□□□□□ -2.25
USP29Q9HBJ7 AL136317.1-201ENST00000612653 226 ntBASIC0.97□□□□□ -2.25
USP29Q9HBJ7 AP001362.1-201ENST00000625165 124 ntBASIC0.97□□□□□ -2.25
USP29Q9HBJ7 RNU6-1201P-201ENST00000384227 107 ntBASIC0.96□□□□□ -2.26
USP29Q9HBJ7 MIR577-201ENST00000385196 96 ntBASIC0.96□□□□□ -2.26
USP29Q9HBJ7 SNORD105-201ENST00000386910 85 ntBASIC0.96□□□□□ -2.26
USP29Q9HBJ7 PDCD5P2-201ENST00000507570 312 ntBASIC0.96□□□□□ -2.26
USP29Q9HBJ7 RNU6-531P-201ENST00000516694 104 ntBASIC0.96□□□□□ -2.26
USP29Q9HBJ7 RNU6-919P-201ENST00000516731 104 ntBASIC0.96□□□□□ -2.26
USP29Q9HBJ7 RNU6-765P-201ENST00000516916 99 ntBASIC0.96□□□□□ -2.26
USP29Q9HBJ7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
USP29Q9HBJ7 RNU6-364P-201ENST00000384387 107 ntBASIC0.95□□□□□ -2.26
USP29Q9HBJ7 RNU6-106P-201ENST00000384405 107 ntBASIC0.95□□□□□ -2.26
USP29Q9HBJ7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.95□□□□□ -2.26
USP29Q9HBJ7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
USP29Q9HBJ7 MIR5000-201ENST00000577717 103 ntBASIC0.95□□□□□ -2.26
USP29Q9HBJ7 MIR4694-201ENST00000578534 80 ntBASIC0.95□□□□□ -2.26
USP29Q9HBJ7 RNU6-1099P-201ENST00000363533 107 ntBASIC0.94□□□□□ -2.26
USP29Q9HBJ7 Y_RNA.205-201ENST00000364128 113 ntBASIC0.94□□□□□ -2.26
USP29Q9HBJ7 Y_RNA.247-201ENST00000364500 92 ntBASIC0.94□□□□□ -2.26
USP29Q9HBJ7 Y_RNA.377-201ENST00000365644 108 ntBASIC0.94□□□□□ -2.26
USP29Q9HBJ7 RNU1-119P-201ENST00000391122 165 ntBASIC0.94□□□□□ -2.26
USP29Q9HBJ7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.94□□□□□ -2.26
USP29Q9HBJ7 MIR3613-201ENST00000579844 87 ntBASIC0.94□□□□□ -2.26
USP29Q9HBJ7 AC090897.1-201ENST00000580909 226 ntBASIC0.94□□□□□ -2.26
USP29Q9HBJ7 AC025627.3-201ENST00000582078 182 ntBASIC0.94□□□□□ -2.26
USP29Q9HBJ7 AL512310.12-203ENST00000640543 90 ntBASIC0.94□□□□□ -2.26
USP29Q9HBJ7 HSBP1P2-201ENST00000299671 229 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 MIR373-201ENST00000362273 69 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 RNU4-58P-201ENST00000363192 141 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 RNU6-755P-201ENST00000364400 103 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 SNORA72.6-201ENST00000384520 129 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 MIR216A-201ENST00000385063 110 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 MIR520H-201ENST00000385126 88 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 RNU6-554P-201ENST00000410466 106 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 AL035461.1-201ENST00000421490 332 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 AC013244.2-201ENST00000603396 103 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 AL442128.1-201ENST00000615151 90 ntBASIC0.93□□□□□ -2.26
USP29Q9HBJ7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.93□□□□□ -2.26
USP29Q9HBJ7 RNY3P2-201ENST00000362918 102 ntBASIC0.92□□□□□ -2.26
USP29Q9HBJ7 RNU6-832P-201ENST00000363319 107 ntBASIC0.92□□□□□ -2.26
USP29Q9HBJ7 Y_RNA.163-201ENST00000363702 113 ntBASIC0.92□□□□□ -2.26
USP29Q9HBJ7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
USP29Q9HBJ7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.91□□□□□ -2.26
USP29Q9HBJ7 RNU6-44P-201ENST00000384045 107 ntBASIC0.91□□□□□ -2.26
USP29Q9HBJ7 RNY1P4-201ENST00000384595 115 ntBASIC0.91□□□□□ -2.26
USP29Q9HBJ7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.91□□□□□ -2.26
USP29Q9HBJ7 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
USP29Q9HBJ7 AP003327.1-201ENST00000529684 127 ntBASIC0.91□□□□□ -2.26
USP29Q9HBJ7 DEFB131E-201ENST00000532329 154 ntBASIC0.91□□□□□ -2.26
USP29Q9HBJ7 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
USP29Q9HBJ7 MIR4500-201ENST00000579472 76 ntBASIC0.91□□□□□ -2.26
USP29Q9HBJ7 RN7SL793P-201ENST00000583259 296 ntBASIC0.91□□□□□ -2.26
USP29Q9HBJ7 uc_338.28-201ENST00000612082 187 ntBASIC0.91□□□□□ -2.26
USP29Q9HBJ7 SNORD38.1-201ENST00000363863 68 ntBASIC0.9□□□□□ -2.27
USP29Q9HBJ7 RNU6-448P-201ENST00000517052 107 ntBASIC0.9□□□□□ -2.27
USP29Q9HBJ7 Y_RNA.78-201ENST00000362970 110 ntBASIC0.89□□□□□ -2.27
USP29Q9HBJ7 MIR573-201ENST00000384964 99 ntBASIC0.89□□□□□ -2.27
USP29Q9HBJ7 SNORD100-201ENST00000408573 76 ntBASIC0.89□□□□□ -2.27
USP29Q9HBJ7 SNORD99-201ENST00000408612 74 ntBASIC0.89□□□□□ -2.27
USP29Q9HBJ7 SNORA19.1-201ENST00000410656 129 ntBASIC0.89□□□□□ -2.27
USP29Q9HBJ7 AC244098.3-201ENST00000424803 96 ntBASIC0.89□□□□□ -2.27
USP29Q9HBJ7 RNU6-904P-201ENST00000516206 101 ntBASIC0.89□□□□□ -2.27
USP29Q9HBJ7 RNU6-537P-201ENST00000517277 103 ntBASIC0.89□□□□□ -2.27
USP29Q9HBJ7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.89□□□□□ -2.27
USP29Q9HBJ7 SNORA63.4-201ENST00000362763 126 ntBASIC0.88□□□□□ -2.27
USP29Q9HBJ7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
USP29Q9HBJ7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.88□□□□□ -2.27
USP29Q9HBJ7 RNU6-291P-201ENST00000384720 107 ntBASIC0.88□□□□□ -2.27
USP29Q9HBJ7 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
USP29Q9HBJ7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
USP29Q9HBJ7 AC004941.2-201ENST00000427009 228 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms