Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU11-2P-201ENST00000516898 142 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 AC012493.3-201ENST00000604494 112 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 GHRLOS.1-201ENST00000610995 70 ntBASIC2.27□□□□□ -2.05
NUCKS1Q9H1E3 RNU1-36P-201ENST00000365130 165 ntBASIC2.26□□□□□ -2.05
NUCKS1Q9H1E3 MIR1185-1-201ENST00000408598 86 ntBASIC2.26□□□□□ -2.05
NUCKS1Q9H1E3 AL606490.4-201ENST00000423117 127 ntBASIC2.26□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.42-201ENST00000362660 108 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-403P-201ENST00000363163 104 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.207-201ENST00000364142 106 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-654P-201ENST00000364373 107 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-154P-201ENST00000384306 106 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.536-201ENST00000384621 113 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 MIR676-201ENST00000390702 67 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 MIR942-201ENST00000401111 86 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNA5SP95-201ENST00000410319 137 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-947P-201ENST00000516264 106 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 TRDV1-202ENST00000621643 102 ntBASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NUCKS1Q9H1E3 RNA5SP160-201ENST00000364866 120 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 SNORA64-201ENST00000384674 134 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 MIR519A1-201ENST00000385257 85 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-663P-201ENST00000391105 106 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 MIR4648-201ENST00000580107 72 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NUCKS1Q9H1E3 ZNF209P-201ENST00000593450 2304 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 SNORA67.3-201ENST00000384366 140 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-291P-201ENST00000384720 107 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 MIR18B-201ENST00000454574 71 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 RNU2-19P-201ENST00000517288 84 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 AC015688.6-201ENST00000577737 104 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 AC013244.2-201ENST00000603396 103 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NUCKS1Q9H1E3 MIR103A2-201ENST00000362154 78 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 MIR101-2-201ENST00000362195 79 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-340P-201ENST00000364005 107 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.239-201ENST00000364444 113 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-580P-201ENST00000365159 107 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.371-201ENST00000365591 113 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 AC055731.1-201ENST00000474387 401 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 AL133373.1-201ENST00000497098 94 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 Y_RNA.809-201ENST00000516058 95 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 RNU7-156P-201ENST00000517214 74 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 SNRPGP19-201ENST00000603826 189 ntBASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.22□□□□□ -2.05
NUCKS1Q9H1E3 RNU6-471P-201ENST00000383944 106 ntBASIC2.21□□□□□ -2.06
NUCKS1Q9H1E3 RPS27P16-201ENST00000425758 201 ntBASIC2.21□□□□□ -2.06
NUCKS1Q9H1E3 MIR548H5-201ENST00000580314 60 ntBASIC2.21□□□□□ -2.06
NUCKS1Q9H1E3 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.21□□□□□ -2.06
NUCKS1Q9H1E3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
NUCKS1Q9H1E3 RNA5SP276-201ENST00000362580 94 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 RNU6-1260P-201ENST00000362944 107 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 RNA5SP264-201ENST00000363115 107 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 RNY4P3-201ENST00000365254 95 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 MIR1261-201ENST00000408659 82 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 SNORA77B-201ENST00000578179 125 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 MIR4696-201ENST00000581431 70 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 MIR3140-201ENST00000583685 90 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 RNU7-10P-201ENST00000607194 63 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 U6.100-201ENST00000636230 99 ntBASIC2.2□□□□□ -2.06
NUCKS1Q9H1E3 RNU6-664P-201ENST00000362381 107 ntBASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 SNORD101-201ENST00000384027 73 ntBASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 AC092628.1-201ENST00000436250 252 ntBASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.19□□□□□ -2.06
NUCKS1Q9H1E3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.18□□□□□ -2.06
NUCKS1Q9H1E3 AC023934.1-201ENST00000574529 2389 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 Y_RNA.13-201ENST00000362403 112 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 Y_RNA.56-201ENST00000362798 112 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 MIR2113-201ENST00000459007 91 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 RNU7-185P-201ENST00000459215 60 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 MIR5089-201ENST00000580047 84 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 AC005520.4-201ENST00000604337 90 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 MIR6082-201ENST00000613604 109 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.17□□□□□ -2.06
NUCKS1Q9H1E3 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 Y_RNA.606-201ENST00000410579 103 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 RNU6-1054P-201ENST00000411293 104 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 snoU13.21-201ENST00000459368 105 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 Y_RNA.697-201ENST00000516776 113 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 MTRNR2L2-201ENST00000604882 87 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 MIR219B-201ENST00000637023 88 ntBASIC2.16□□□□□ -2.06
NUCKS1Q9H1E3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.15□□□□□ -2.06
NUCKS1Q9H1E3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NUCKS1Q9H1E3 MIR3675-201ENST00000583661 73 ntBASIC2.15□□□□□ -2.07
NUCKS1Q9H1E3 RNU6-681P-201ENST00000364012 104 ntBASIC2.14□□□□□ -2.07
NUCKS1Q9H1E3 MIR1257-201ENST00000408490 117 ntBASIC2.14□□□□□ -2.07
NUCKS1Q9H1E3 AC097635.1-201ENST00000450678 155 ntBASIC2.14□□□□□ -2.07
NUCKS1Q9H1E3 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 322.8 ms