Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MIR548AE2-201ENST00000583456 67 ntBASIC-1.33□□□□□ -2.62
LIMD2Q9BT23 AC006006.1-201ENST00000603082 144 ntBASIC-1.33□□□□□ -2.62
LIMD2Q9BT23 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.33□□□□□ -2.62
LIMD2Q9BT23 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 SNORD115-19-201ENST00000363098 82 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 SNORD115-18-201ENST00000363293 82 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 SNORD115-17-201ENST00000364612 82 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 RNU6-310P-201ENST00000384655 107 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 AC096644.2-201ENST00000429278 159 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 RNU6-507P-201ENST00000516045 100 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 AL353803.5-201ENST00000599815 141 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 MIR4272-201ENST00000635924 64 ntBASIC-1.34□□□□□ -2.62
LIMD2Q9BT23 RNU4-10P-201ENST00000364383 140 ntBASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 RNY1P6-201ENST00000384193 109 ntBASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 MIR181A1-201ENST00000385026 110 ntBASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 RNU4-61P-201ENST00000411243 107 ntBASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 AL731563.1-201ENST00000442202 214 ntBASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 MIR4756-201ENST00000577874 78 ntBASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 AC048344.4-201ENST00000619744 527 ntBASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 AP001362.1-201ENST00000625165 124 ntBASIC-1.35□□□□□ -2.63
LIMD2Q9BT23 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.36□□□□□ -2.63
LIMD2Q9BT23 SNORD115-22-201ENST00000364456 82 ntBASIC-1.36□□□□□ -2.63
LIMD2Q9BT23 RNU6-890P-201ENST00000384121 107 ntBASIC-1.36□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.36□□□□□ -2.63
LIMD2Q9BT23 AC022028.1-201ENST00000412054 408 ntBASIC-1.36□□□□□ -2.63
LIMD2Q9BT23 AC108019.1-201ENST00000512540 175 ntBASIC-1.36□□□□□ -2.63
LIMD2Q9BT23 MIR5690-201ENST00000583739 73 ntBASIC-1.36□□□□□ -2.63
LIMD2Q9BT23 MIR6888-201ENST00000621977 67 ntBASIC-1.36□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.37□□□□□ -2.63
LIMD2Q9BT23 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.37□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.37□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.37□□□□□ -2.63
LIMD2Q9BT23 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.37□□□□□ -2.63
LIMD2Q9BT23 MIR1270-201ENST00000459320 83 ntBASIC-1.37□□□□□ -2.63
LIMD2Q9BT23 RNU6-506P-201ENST00000516553 94 ntBASIC-1.37□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.37□□□□□ -2.63
LIMD2Q9BT23 RNU6-980P-201ENST00000516925 103 ntBASIC-1.37□□□□□ -2.63
LIMD2Q9BT23 RPS29P30-201ENST00000600975 111 ntBASIC-1.37□□□□□ -2.63
LIMD2Q9BT23 RNA5SP93-201ENST00000362525 114 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 RNU6-164P-201ENST00000364604 103 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 MIR559-201ENST00000385188 96 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 MIR216B-201ENST00000390186 82 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 SNORD75.2-201ENST00000408784 58 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 MTND4LP30-201ENST00000454092 297 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 MIR6773-201ENST00000612812 74 ntBASIC-1.38□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.39□□□□□ -2.63
LIMD2Q9BT23 RNU6-472P-201ENST00000384299 107 ntBASIC-1.39□□□□□ -2.63
LIMD2Q9BT23 MIR206-201ENST00000384872 86 ntBASIC-1.39□□□□□ -2.63
LIMD2Q9BT23 MIRLET7B-201ENST00000385140 83 ntBASIC-1.39□□□□□ -2.63
LIMD2Q9BT23 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.39□□□□□ -2.63
LIMD2Q9BT23 AP002795.1-201ENST00000534879 84 ntBASIC-1.39□□□□□ -2.63
LIMD2Q9BT23 MIR4308-201ENST00000580634 81 ntBASIC-1.39□□□□□ -2.63
LIMD2Q9BT23 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 RNU6-119P-201ENST00000364882 107 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 RNU6-728P-201ENST00000365375 104 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 MIR624-201ENST00000385217 97 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 RNU4-14P-201ENST00000410858 122 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 HSPE1P25-201ENST00000455484 251 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 RNU6-415P-201ENST00000516252 97 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 SNORA40.14-201ENST00000516543 86 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 RNU6-314P-201ENST00000516574 104 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 AL138825.1-201ENST00000618587 192 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 snoU18.1-201ENST00000629629 71 ntBASIC-1.4□□□□□ -2.63
LIMD2Q9BT23 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 RNU4-17P-201ENST00000365598 141 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 MIR616-201ENST00000385293 97 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 MT-TT-201ENST00000387460 66 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 AL078595.1-201ENST00000404458 226 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 RNU2-16P-201ENST00000410712 136 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 RNU6-762P-201ENST00000517107 102 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 MIR3139-201ENST00000579145 76 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 MIR548O2-201ENST00000616090 70 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 AC022079.1-201ENST00000621546 602 ntBASIC-1.41□□□□□ -2.64
LIMD2Q9BT23 snoR1.1-201ENST00000628177 80 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 259.1 ms