Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 U6.90-201ENST00000614007 104 ntBASIC0.48□□□□□ -2.33
EBF4Q9BQW3 U6.70-201ENST00000620287 104 ntBASIC0.48□□□□□ -2.33
EBF4Q9BQW3 AC091304.10-201ENST00000641554 121 ntBASIC0.48□□□□□ -2.33
EBF4Q9BQW3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 Y_RNA.213-201ENST00000364178 111 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 Y_RNA.346-201ENST00000365385 112 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 Y_RNA.508-201ENST00000384502 114 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 Y_RNA.563-201ENST00000384707 108 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 RNU6-291P-201ENST00000384720 107 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 SNORD77B-201ENST00000391112 67 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 SNORA31.14-201ENST00000516728 116 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 RNU6-1006P-201ENST00000516998 103 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 DEFB131E-201ENST00000532329 154 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 CYP3A137P-201ENST00000562436 69 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 AC133485.1-201ENST00000567176 124 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 AC138907.6-201ENST00000568401 126 ntBASIC0.47□□□□□ -2.33
EBF4Q9BQW3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
EBF4Q9BQW3 MIR18A-201ENST00000362310 71 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNU6-363P-201ENST00000362895 105 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNU6-1290P-201ENST00000362957 109 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNU4-67P-201ENST00000364569 141 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNA5SP205-201ENST00000364653 136 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNU6-1117P-201ENST00000384525 104 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 MIR548A3-201ENST00000385297 97 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 MIR759-201ENST00000390224 91 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNU6-816P-201ENST00000390914 107 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNU6-1154P-201ENST00000391001 104 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNU6-1268P-201ENST00000391214 107 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNU6-1239P-201ENST00000391310 107 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 RNU6-448P-201ENST00000517052 107 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 uc_338.16-201ENST00000621804 95 ntBASIC0.46□□□□□ -2.34
EBF4Q9BQW3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.46□□□□□ -2.34
EBF4Q9BQW3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
EBF4Q9BQW3 SNORA63.4-201ENST00000362763 126 ntBASIC0.45□□□□□ -2.34
EBF4Q9BQW3 RNY4P6-201ENST00000363667 96 ntBASIC0.45□□□□□ -2.34
EBF4Q9BQW3 SNORA36.2-201ENST00000384004 127 ntBASIC0.45□□□□□ -2.34
EBF4Q9BQW3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.45□□□□□ -2.34
EBF4Q9BQW3 SNORD100-201ENST00000408573 76 ntBASIC0.45□□□□□ -2.34
EBF4Q9BQW3 AC008267.6-201ENST00000441664 139 ntBASIC0.45□□□□□ -2.34
EBF4Q9BQW3 RNA5SP436-201ENST00000516020 115 ntBASIC0.45□□□□□ -2.34
EBF4Q9BQW3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.45□□□□□ -2.34
EBF4Q9BQW3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.45□□□□□ -2.34
EBF4Q9BQW3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
EBF4Q9BQW3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.45□□□□□ -2.34
EBF4Q9BQW3 Y_RNA.155-201ENST00000363632 101 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 U8.6-201ENST00000364939 135 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 Y_RNA.360-201ENST00000365512 102 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 SNORD20-201ENST00000384550 80 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 RNU6-535P-201ENST00000384722 107 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
EBF4Q9BQW3 AL161932.1-201ENST00000437408 146 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 RNU7-106P-201ENST00000459514 67 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 TRAJ51-201ENST00000504127 63 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 RNU6-479P-201ENST00000516348 105 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 RNU4-54P-201ENST00000516428 129 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 RNA5SP121-201ENST00000516537 101 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 MIR3678-201ENST00000578455 94 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 MIR4714-201ENST00000580728 77 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 AL670379.3-201ENST00000605040 251 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 MIR6515-201ENST00000619843 57 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 AL162726.3-218ENST00000636401 95 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 U6.95-201ENST00000636931 70 ntBASIC0.44□□□□□ -2.34
EBF4Q9BQW3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
EBF4Q9BQW3 Y_RNA.98-201ENST00000363109 102 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 RNU6-865P-201ENST00000364772 107 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 SNORD116-21-201ENST00000384507 92 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 MIR577-201ENST00000385196 96 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 RNU2-51P-201ENST00000410708 197 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 snoU13.18-201ENST00000459483 104 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 RNU6-1194P-201ENST00000516208 104 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 RNU6-109P-201ENST00000516364 107 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 RNU6-184P-201ENST00000516514 107 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 RNU6-765P-201ENST00000516916 99 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 AC068339.1-201ENST00000526965 141 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 MIR5000-201ENST00000577717 103 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 AL512310.12-203ENST00000640543 90 ntBASIC0.43□□□□□ -2.34
EBF4Q9BQW3 RNU6-1313P-201ENST00000362622 102 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 RNU4-58P-201ENST00000363192 141 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 SNORA36.1-201ENST00000363424 132 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 RNU6-409P-201ENST00000384114 104 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 RNU6-1144P-201ENST00000384247 104 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 RNU6-476P-201ENST00000384726 107 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 RNU6-313P-201ENST00000516317 112 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 RNU6-62P-201ENST00000516526 102 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 RNU6-789P-201ENST00000517105 102 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 MIR4679-2-201ENST00000578358 77 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 uc_338.28-201ENST00000612082 187 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 AC022709.1-201ENST00000615967 87 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 AP001362.1-201ENST00000625165 124 ntBASIC0.42□□□□□ -2.34
EBF4Q9BQW3 RNU6-1201P-201ENST00000384227 107 ntBASIC0.41□□□□□ -2.34
EBF4Q9BQW3 MIR489-201ENST00000384923 84 ntBASIC0.41□□□□□ -2.34
EBF4Q9BQW3 MIR140-201ENST00000385282 100 ntBASIC0.41□□□□□ -2.34
EBF4Q9BQW3 RNU6-1064P-201ENST00000410626 104 ntBASIC0.41□□□□□ -2.34
EBF4Q9BQW3 AC092628.1-201ENST00000436250 252 ntBASIC0.41□□□□□ -2.34
EBF4Q9BQW3 RNU6-795P-201ENST00000516323 103 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 265.1 ms