Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CNTNAP3BQ96NU0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CNTNAP3BQ96NU0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 MIR378A-201ENST00000362177 66 ntBASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 RNU6-1260P-201ENST00000362944 107 ntBASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 RNA5SP48-201ENST00000363969 126 ntBASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 SNORA3A-201ENST00000364113 130 ntBASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 SNORA26.9-201ENST00000391322 122 ntBASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 SNORD100-201ENST00000408573 76 ntBASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 uc_338.6-201ENST00000613544 171 ntBASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 MIR6873-201ENST00000622788 63 ntBASIC2.44□□□□□ -2.02
CNTNAP3BQ96NU0 Y_RNA.536-201ENST00000384621 113 ntBASIC2.43□□□□□ -2.02
CNTNAP3BQ96NU0 MT-TF-201ENST00000387314 71 ntBASIC2.43□□□□□ -2.02
CNTNAP3BQ96NU0 RNA5SP282-201ENST00000516355 108 ntBASIC2.43□□□□□ -2.02
CNTNAP3BQ96NU0 RNU7-193P-201ENST00000516723 65 ntBASIC2.43□□□□□ -2.02
CNTNAP3BQ96NU0 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
CNTNAP3BQ96NU0 MIR4264-201ENST00000583520 66 ntBASIC2.43□□□□□ -2.02
CNTNAP3BQ96NU0 AC092634.7-201ENST00000621022 103 ntBASIC2.43□□□□□ -2.02
CNTNAP3BQ96NU0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CNTNAP3BQ96NU0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CNTNAP3BQ96NU0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CNTNAP3BQ96NU0 RNU6-808P-201ENST00000391233 108 ntBASIC2.42□□□□□ -2.02
CNTNAP3BQ96NU0 AC131280.1-202ENST00000624067 4211 ntBASIC2.42□□□□□ -2.02
CNTNAP3BQ96NU0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 RNU6-53P-201ENST00000365367 106 ntBASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 Y_RNA.809-201ENST00000516058 95 ntBASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 RNU6-982P-201ENST00000516216 102 ntBASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 RNU6-752P-201ENST00000516376 102 ntBASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 MIR466-201ENST00000580653 84 ntBASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 AL359821.1-201ENST00000605519 182 ntBASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CNTNAP3BQ96NU0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
CNTNAP3BQ96NU0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
CNTNAP3BQ96NU0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 SNORD114-26-201ENST00000363543 72 ntBASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 Y_RNA.178-201ENST00000363832 102 ntBASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 MIR524-201ENST00000385242 87 ntBASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-1052P-201ENST00000411398 104 ntBASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-719P-201ENST00000516671 104 ntBASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-369P-201ENST00000362515 102 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 SNORA25.5-201ENST00000363782 126 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-396P-201ENST00000365369 105 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 Y_RNA.375-201ENST00000365625 101 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 MT-TN-201ENST00000387400 73 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-935P-201ENST00000410371 100 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 AC004965.1-201ENST00000413033 213 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 RNU7-62P-201ENST00000458856 62 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-542P-201ENST00000516405 103 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 MIR3192-201ENST00000584920 77 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 AC010297.1-201ENST00000623948 149 ntBASIC2.39□□□□□ -2.03
CNTNAP3BQ96NU0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CNTNAP3BQ96NU0 SNORA25.3-201ENST00000363205 127 ntBASIC2.38□□□□□ -2.03
CNTNAP3BQ96NU0 Y_RNA.258-201ENST00000364613 105 ntBASIC2.38□□□□□ -2.03
CNTNAP3BQ96NU0 SNORA17.3-201ENST00000391159 129 ntBASIC2.38□□□□□ -2.03
CNTNAP3BQ96NU0 SUMO1P4-201ENST00000429430 302 ntBASIC2.38□□□□□ -2.03
CNTNAP3BQ96NU0 RPL30P7-201ENST00000479312 323 ntBASIC2.38□□□□□ -2.03
CNTNAP3BQ96NU0 SNORD111.1-201ENST00000516421 86 ntBASIC2.38□□□□□ -2.03
CNTNAP3BQ96NU0 MIR548H5-201ENST00000580314 60 ntBASIC2.38□□□□□ -2.03
CNTNAP3BQ96NU0 AC245884.12-201ENST00000615364 59 ntBASIC2.38□□□□□ -2.03
CNTNAP3BQ96NU0 FO624990.1-201ENST00000636373 85 ntBASIC2.38□□□□□ -2.03
CNTNAP3BQ96NU0 RNA5SP192-201ENST00000364404 120 ntBASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 SNORD113-4-201ENST00000364802 75 ntBASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-1184P-201ENST00000384588 108 ntBASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 MIR194-1-201ENST00000384892 85 ntBASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 MIR451A-201ENST00000385059 72 ntBASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-1177P-201ENST00000391058 104 ntBASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 MIR3920-201ENST00000581751 86 ntBASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 RNU7-10P-201ENST00000607194 63 ntBASIC2.37□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-940P-201ENST00000363433 104 ntBASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-654P-201ENST00000364373 107 ntBASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-382P-201ENST00000365181 106 ntBASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-936P-201ENST00000384005 107 ntBASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-203P-201ENST00000384038 104 ntBASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 AC244098.3-201ENST00000424803 96 ntBASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-274P-201ENST00000459566 107 ntBASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 MIR3605-201ENST00000583214 100 ntBASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 AC013244.2-201ENST00000603396 103 ntBASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 MIR4773-1-201ENST00000637203 78 ntBASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CNTNAP3BQ96NU0 Y_RNA.56-201ENST00000362798 112 ntBASIC2.35□□□□□ -2.03
CNTNAP3BQ96NU0 RNU1-36P-201ENST00000365130 165 ntBASIC2.35□□□□□ -2.03
CNTNAP3BQ96NU0 RNA5SP117-201ENST00000365294 118 ntBASIC2.35□□□□□ -2.03
CNTNAP3BQ96NU0 RNU6-42P-201ENST00000384165 107 ntBASIC2.35□□□□□ -2.03
CNTNAP3BQ96NU0 RNA5SP212-201ENST00000391223 107 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 254.5 ms