Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.55□□□□□ -2.16
PTCHD1Q96NR3 AC015818.7-201ENST00000428754 109 ntBASIC1.55□□□□□ -2.16
PTCHD1Q96NR3 AC087499.7-201ENST00000441958 109 ntBASIC1.55□□□□□ -2.16
PTCHD1Q96NR3 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
PTCHD1Q96NR3 MIR4771-2-201ENST00000577758 74 ntBASIC1.55□□□□□ -2.16
PTCHD1Q96NR3 MIR4771-1-201ENST00000582617 74 ntBASIC1.55□□□□□ -2.16
PTCHD1Q96NR3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PTCHD1Q96NR3 SNORD79.1-201ENST00000516069 84 ntBASIC1.54□□□□□ -2.16
PTCHD1Q96NR3 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
PTCHD1Q96NR3 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
PTCHD1Q96NR3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.53□□□□□ -2.16
PTCHD1Q96NR3 AL161932.1-201ENST00000437408 146 ntBASIC1.53□□□□□ -2.16
PTCHD1Q96NR3 RNU7-90P-201ENST00000459216 62 ntBASIC1.53□□□□□ -2.16
PTCHD1Q96NR3 MIR6082-201ENST00000613604 109 ntBASIC1.53□□□□□ -2.16
PTCHD1Q96NR3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.52□□□□□ -2.17
PTCHD1Q96NR3 MIR125B2-201ENST00000385128 89 ntBASIC1.52□□□□□ -2.17
PTCHD1Q96NR3 RPS26P5-201ENST00000418544 335 ntBASIC1.52□□□□□ -2.17
PTCHD1Q96NR3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.52□□□□□ -2.17
PTCHD1Q96NR3 RNU7-40P-201ENST00000516397 64 ntBASIC1.52□□□□□ -2.17
PTCHD1Q96NR3 SNORA70.22-201ENST00000517160 124 ntBASIC1.52□□□□□ -2.17
PTCHD1Q96NR3 AC013244.2-201ENST00000603396 103 ntBASIC1.52□□□□□ -2.17
PTCHD1Q96NR3 MIR101-2-201ENST00000362195 79 ntBASIC1.51□□□□□ -2.17
PTCHD1Q96NR3 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
PTCHD1Q96NR3 RNU6-497P-201ENST00000365316 104 ntBASIC1.51□□□□□ -2.17
PTCHD1Q96NR3 RNU6-242P-201ENST00000384359 107 ntBASIC1.51□□□□□ -2.17
PTCHD1Q96NR3 RNU6-519P-201ENST00000410590 108 ntBASIC1.51□□□□□ -2.17
PTCHD1Q96NR3 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
PTCHD1Q96NR3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.51□□□□□ -2.17
PTCHD1Q96NR3 MIR1245B-201ENST00000636115 69 ntBASIC1.51□□□□□ -2.17
PTCHD1Q96NR3 RNU6-633P-201ENST00000362612 103 ntBASIC1.5□□□□□ -2.17
PTCHD1Q96NR3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.5□□□□□ -2.17
PTCHD1Q96NR3 MIR516A2-201ENST00000384888 90 ntBASIC1.5□□□□□ -2.17
PTCHD1Q96NR3 MIR516A1-201ENST00000385033 90 ntBASIC1.5□□□□□ -2.17
PTCHD1Q96NR3 SNORD100-201ENST00000408573 76 ntBASIC1.5□□□□□ -2.17
PTCHD1Q96NR3 RNU6-994P-201ENST00000410507 111 ntBASIC1.5□□□□□ -2.17
PTCHD1Q96NR3 MIR5588-201ENST00000581890 63 ntBASIC1.5□□□□□ -2.17
PTCHD1Q96NR3 AL512598.1-201ENST00000610158 273 ntBASIC1.5□□□□□ -2.17
PTCHD1Q96NR3 RNU6-509P-201ENST00000363519 107 ntBASIC1.49□□□□□ -2.17
PTCHD1Q96NR3 AL603825.1-201ENST00000438481 80 ntBASIC1.49□□□□□ -2.17
PTCHD1Q96NR3 RNU6-765P-201ENST00000516916 99 ntBASIC1.49□□□□□ -2.17
PTCHD1Q96NR3 RNU7-156P-201ENST00000517214 74 ntBASIC1.49□□□□□ -2.17
PTCHD1Q96NR3 SNORD53B-201ENST00000577887 78 ntBASIC1.49□□□□□ -2.17
PTCHD1Q96NR3 MIR4676-201ENST00000583078 72 ntBASIC1.49□□□□□ -2.17
PTCHD1Q96NR3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.49□□□□□ -2.17
PTCHD1Q96NR3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.48□□□□□ -2.17
PTCHD1Q96NR3 Y_RNA.219-201ENST00000364232 113 ntBASIC1.48□□□□□ -2.17
PTCHD1Q96NR3 RNU6-1276P-201ENST00000365372 104 ntBASIC1.48□□□□□ -2.17
PTCHD1Q96NR3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PTCHD1Q96NR3 RNU6-979P-201ENST00000383896 107 ntBASIC1.48□□□□□ -2.17
PTCHD1Q96NR3 RNU6-1254P-201ENST00000391266 104 ntBASIC1.48□□□□□ -2.17
PTCHD1Q96NR3 Y_RNA.611-201ENST00000410682 108 ntBASIC1.48□□□□□ -2.17
PTCHD1Q96NR3 SNORD63B-201ENST00000411005 70 ntBASIC1.48□□□□□ -2.17
PTCHD1Q96NR3 Y_RNA.648-201ENST00000459455 110 ntBASIC1.48□□□□□ -2.17
PTCHD1Q96NR3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 SNORD36A-201ENST00000362874 73 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 MIR635-201ENST00000384830 98 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 RNU6-243P-201ENST00000391140 107 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 RNU7-106P-201ENST00000459514 67 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 AP003327.1-201ENST00000529684 127 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 MIR548H5-201ENST00000580314 60 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 BX248123.2-201ENST00000606318 124 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 MIR548BB-201ENST00000626714 66 ntBASIC1.47□□□□□ -2.17
PTCHD1Q96NR3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.46□□□□□ -2.18
PTCHD1Q96NR3 SNORD115-27-201ENST00000364430 82 ntBASIC1.46□□□□□ -2.18
PTCHD1Q96NR3 RNU6-364P-201ENST00000384387 107 ntBASIC1.46□□□□□ -2.18
PTCHD1Q96NR3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.46□□□□□ -2.18
PTCHD1Q96NR3 MIR222-201ENST00000384992 110 ntBASIC1.46□□□□□ -2.18
PTCHD1Q96NR3 RNU7-10P-201ENST00000607194 63 ntBASIC1.46□□□□□ -2.18
PTCHD1Q96NR3 MIR378A-201ENST00000362177 66 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 Y_RNA.426-201ENST00000384068 113 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 MIR517C-201ENST00000385103 95 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 SNORA17.3-201ENST00000391159 129 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 MIR938-201ENST00000401216 83 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 SNORD4B-201ENST00000459083 72 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 snoU13.11-201ENST00000459219 104 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 TRAJ51-201ENST00000504127 63 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 SNORD92-201ENST00000585078 85 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 AC027335.2-201ENST00000624030 375 ntBASIC1.45□□□□□ -2.18
PTCHD1Q96NR3 RNU6-369P-201ENST00000362515 102 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 MIR519C-201ENST00000385053 87 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 SNORD78.1-201ENST00000390866 65 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 RNU7-85P-201ENST00000458851 63 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 RNU7-171P-201ENST00000459581 62 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 RNU6-977P-201ENST00000516411 103 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 MIR4303-201ENST00000581299 66 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 MIR4781-201ENST00000585250 76 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 AL645939.4-201ENST00000604495 135 ntBASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
PTCHD1Q96NR3 MIR100-201ENST00000385259 80 ntBASIC1.43□□□□□ -2.18
PTCHD1Q96NR3 MIR1323-201ENST00000408090 73 ntBASIC1.43□□□□□ -2.18
PTCHD1Q96NR3 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
PTCHD1Q96NR3 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
PTCHD1Q96NR3 AC002429.1-201ENST00000437672 148 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms