Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU6-643P-201ENST00000384018 107 ntBASIC-0.69□□□□□ -2.52
USP47Q96K76 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.69□□□□□ -2.52
USP47Q96K76 MIR548I2-201ENST00000408348 149 ntBASIC-0.69□□□□□ -2.52
USP47Q96K76 RNU7-195P-201ENST00000458793 62 ntBASIC-0.69□□□□□ -2.52
USP47Q96K76 RNU7-74P-201ENST00000459104 62 ntBASIC-0.69□□□□□ -2.52
USP47Q96K76 MIR655-201ENST00000362159 97 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 RNU1-141P-201ENST00000364623 158 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 RNU6-811P-201ENST00000384069 107 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 RNU6-985P-201ENST00000410182 104 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 MIR4801-201ENST00000582704 82 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 RNU6-713P-201ENST00000384761 107 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 MIR206-201ENST00000384872 86 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 RNU4-69P-201ENST00000410677 143 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 AC244250.2-201ENST00000418731 148 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 RNA5SP236-201ENST00000516169 116 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 uc_338.10-201ENST00000621872 182 ntBASIC-0.7□□□□□ -2.52
USP47Q96K76 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.71□□□□□ -2.52
USP47Q96K76 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.71□□□□□ -2.52
USP47Q96K76 RNU6-493P-201ENST00000391321 108 ntBASIC-0.71□□□□□ -2.52
USP47Q96K76 SNORD63B-201ENST00000411005 70 ntBASIC-0.71□□□□□ -2.52
USP47Q96K76 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.72□□□□□ -2.53
USP47Q96K76 RNA5SP205-201ENST00000364653 136 ntBASIC-0.72□□□□□ -2.53
USP47Q96K76 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.72□□□□□ -2.53
USP47Q96K76 RNU6-524P-201ENST00000384270 107 ntBASIC-0.72□□□□□ -2.53
USP47Q96K76 RNU7-164P-201ENST00000459221 62 ntBASIC-0.72□□□□□ -2.53
USP47Q96K76 AC114755.3-201ENST00000481111 251 ntBASIC-0.72□□□□□ -2.53
USP47Q96K76 RNU6-240P-201ENST00000516098 97 ntBASIC-0.72□□□□□ -2.53
USP47Q96K76 AC138907.4-201ENST00000570107 226 ntBASIC-0.72□□□□□ -2.53
USP47Q96K76 MIR4473-201ENST00000583731 91 ntBASIC-0.72□□□□□ -2.53
USP47Q96K76 AC021443.1-201ENST00000604478 211 ntBASIC-0.72□□□□□ -2.53
USP47Q96K76 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 RNU6-480P-201ENST00000384332 107 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 MT-TW-201ENST00000387382 68 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 MIR1302-6-201ENST00000408466 90 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 RNU7-188P-201ENST00000517063 64 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 AC009779.6-201ENST00000603972 165 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 AC011603.4-201ENST00000611325 277 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 AL391099.1-201ENST00000624635 187 ntBASIC-0.73□□□□□ -2.53
USP47Q96K76 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.74□□□□□ -2.53
USP47Q96K76 RNU4-84P-201ENST00000364200 139 ntBASIC-0.74□□□□□ -2.53
USP47Q96K76 MIR181B2-201ENST00000385004 89 ntBASIC-0.74□□□□□ -2.53
USP47Q96K76 MIR519A1-201ENST00000385257 85 ntBASIC-0.74□□□□□ -2.53
USP47Q96K76 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.74□□□□□ -2.53
USP47Q96K76 MTND5P40-201ENST00000559945 246 ntBASIC-0.74□□□□□ -2.53
USP47Q96K76 AC020661.2-201ENST00000560114 134 ntBASIC-0.74□□□□□ -2.53
USP47Q96K76 AP001362.1-201ENST00000625165 124 ntBASIC-0.74□□□□□ -2.53
USP47Q96K76 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.75□□□□□ -2.53
USP47Q96K76 SNORD114-11-201ENST00000363738 75 ntBASIC-0.75□□□□□ -2.53
USP47Q96K76 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.75□□□□□ -2.53
USP47Q96K76 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.75□□□□□ -2.53
USP47Q96K76 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.75□□□□□ -2.53
USP47Q96K76 U6.104-201ENST00000637979 90 ntBASIC-0.75□□□□□ -2.53
USP47Q96K76 RNU6-170P-201ENST00000362832 104 ntBASIC-0.76□□□□□ -2.53
USP47Q96K76 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.76□□□□□ -2.53
USP47Q96K76 RNU6-238P-201ENST00000363313 106 ntBASIC-0.76□□□□□ -2.53
USP47Q96K76 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.76□□□□□ -2.53
USP47Q96K76 RNU7-106P-201ENST00000459514 67 ntBASIC-0.76□□□□□ -2.53
USP47Q96K76 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.76□□□□□ -2.53
USP47Q96K76 YWHAEP2-201ENST00000580066 112 ntBASIC-0.76□□□□□ -2.53
USP47Q96K76 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.77□□□□□ -2.53
USP47Q96K76 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.77□□□□□ -2.53
USP47Q96K76 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.77□□□□□ -2.53
USP47Q96K76 SNORD77B-201ENST00000391112 67 ntBASIC-0.77□□□□□ -2.53
USP47Q96K76 RNU6-735P-201ENST00000410612 107 ntBASIC-0.77□□□□□ -2.53
USP47Q96K76 RNU7-123P-201ENST00000515911 60 ntBASIC-0.77□□□□□ -2.53
USP47Q96K76 RNU7-2P-201ENST00000516096 62 ntBASIC-0.77□□□□□ -2.53
USP47Q96K76 AL590491.3-201ENST00000610731 82 ntBASIC-0.77□□□□□ -2.53
USP47Q96K76 AC069503.3-201ENST00000618674 145 ntBASIC-0.77□□□□□ -2.53
USP47Q96K76 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.78□□□□□ -2.53
USP47Q96K76 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.78□□□□□ -2.53
USP47Q96K76 RNU6-635P-201ENST00000516651 102 ntBASIC-0.78□□□□□ -2.53
USP47Q96K76 MIR3681-201ENST00000580089 72 ntBASIC-0.78□□□□□ -2.53
USP47Q96K76 MIR4436A-201ENST00000585278 85 ntBASIC-0.78□□□□□ -2.53
USP47Q96K76 MIR8062-201ENST00000621515 85 ntBASIC-0.78□□□□□ -2.53
USP47Q96K76 MIR519E-201ENST00000385075 84 ntBASIC-0.79□□□□□ -2.54
USP47Q96K76 MIR548AG2-201ENST00000581228 64 ntBASIC-0.79□□□□□ -2.54
USP47Q96K76 MIR198-201ENST00000637333 62 ntBASIC-0.79□□□□□ -2.54
USP47Q96K76 RNY4P28-201ENST00000365281 93 ntBASIC-0.8□□□□□ -2.54
USP47Q96K76 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.8□□□□□ -2.54
USP47Q96K76 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.8□□□□□ -2.54
USP47Q96K76 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.8□□□□□ -2.54
USP47Q96K76 MIR617-201ENST00000385030 97 ntBASIC-0.8□□□□□ -2.54
USP47Q96K76 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.8□□□□□ -2.54
USP47Q96K76 MTATP6P21-201ENST00000440681 189 ntBASIC-0.8□□□□□ -2.54
USP47Q96K76 MTND1P19-201ENST00000511780 315 ntBASIC-0.8□□□□□ -2.54
USP47Q96K76 RNU6-275P-201ENST00000364910 107 ntBASIC-0.81□□□□□ -2.54
USP47Q96K76 SNORD115-35-201ENST00000365122 82 ntBASIC-0.81□□□□□ -2.54
USP47Q96K76 SNORA33.2-201ENST00000365413 134 ntBASIC-0.81□□□□□ -2.54
USP47Q96K76 RNU6-639P-201ENST00000384074 107 ntBASIC-0.81□□□□□ -2.54
USP47Q96K76 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.81□□□□□ -2.54
USP47Q96K76 RNU6-768P-201ENST00000384683 107 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms