Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RNU6-1237P-201ENST00000384777 107 ntBASIC1.84□□□□□ -2.11
DDX1Q92499 MIR563-201ENST00000385080 79 ntBASIC1.84□□□□□ -2.11
DDX1Q92499 RNU6-902P-201ENST00000517212 91 ntBASIC1.84□□□□□ -2.11
DDX1Q92499 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.84□□□□□ -2.11
DDX1Q92499 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
DDX1Q92499 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
DDX1Q92499 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
DDX1Q92499 SNRPGP12-201ENST00000449481 213 ntBASIC1.83□□□□□ -2.12
DDX1Q92499 snoU13.2-201ENST00000459201 104 ntBASIC1.83□□□□□ -2.12
DDX1Q92499 MTND5P40-201ENST00000559945 246 ntBASIC1.83□□□□□ -2.12
DDX1Q92499 MIR4452-201ENST00000583004 71 ntBASIC1.83□□□□□ -2.12
DDX1Q92499 MIR6734-201ENST00000621166 68 ntBASIC1.83□□□□□ -2.12
DDX1Q92499 RNU6-624P-201ENST00000363411 107 ntBASIC1.82□□□□□ -2.12
DDX1Q92499 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
DDX1Q92499 RNU4-83P-201ENST00000410863 133 ntBASIC1.82□□□□□ -2.12
DDX1Q92499 SNORD4B-201ENST00000459083 72 ntBASIC1.82□□□□□ -2.12
DDX1Q92499 RNU7-95P-201ENST00000459222 64 ntBASIC1.82□□□□□ -2.12
DDX1Q92499 RNU7-153P-201ENST00000516455 62 ntBASIC1.82□□□□□ -2.12
DDX1Q92499 AL512310.8-201ENST00000550183 120 ntBASIC1.82□□□□□ -2.12
DDX1Q92499 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.82□□□□□ -2.12
DDX1Q92499 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.82□□□□□ -2.12
DDX1Q92499 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
DDX1Q92499 AC138749.4-201ENST00000563970 127 ntBASIC1.81□□□□□ -2.12
DDX1Q92499 MIR4285-201ENST00000581001 85 ntBASIC1.81□□□□□ -2.12
DDX1Q92499 MIR3192-201ENST00000584920 77 ntBASIC1.81□□□□□ -2.12
DDX1Q92499 AC008163.1-202ENST00000636004 2889 ntBASIC1.8□□□□□ -2.12
DDX1Q92499 SNORD114-26-201ENST00000363543 72 ntBASIC1.8□□□□□ -2.12
DDX1Q92499 RNU6-478P-201ENST00000363904 110 ntBASIC1.8□□□□□ -2.12
DDX1Q92499 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.8□□□□□ -2.12
DDX1Q92499 AC073261.1-201ENST00000429409 121 ntBASIC1.8□□□□□ -2.12
DDX1Q92499 RNU7-85P-201ENST00000458851 63 ntBASIC1.8□□□□□ -2.12
DDX1Q92499 snoU13.25-201ENST00000458945 104 ntBASIC1.8□□□□□ -2.12
DDX1Q92499 AL133373.1-201ENST00000497098 94 ntBASIC1.8□□□□□ -2.12
DDX1Q92499 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
DDX1Q92499 AL161722.3-201ENST00000605789 2983 ntBASIC1.8□□□□□ -2.12
DDX1Q92499 MIR30D-201ENST00000362283 70 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 RNU6-315P-201ENST00000362666 107 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 RNA5SP48-201ENST00000363969 126 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.79□□□□□ -2.12
DDX1Q92499 RPS27P16-201ENST00000425758 201 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 SNORA25.13-201ENST00000516395 103 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 RN7SKP88-201ENST00000516847 250 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 AP003716.2-201ENST00000528260 108 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 AC090897.1-201ENST00000580909 226 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 MIR4303-201ENST00000581299 66 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 AL096861.1-201ENST00000610899 123 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 7SK.8-201ENST00000612110 250 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 7SK.11-201ENST00000615477 250 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 MIR8066-201ENST00000617280 78 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 7SK.13-201ENST00000622040 250 ntBASIC1.79□□□□□ -2.12
DDX1Q92499 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
DDX1Q92499 Y_RNA.168-201ENST00000363740 102 ntBASIC1.78□□□□□ -2.12
DDX1Q92499 RNA5SP237-201ENST00000410414 113 ntBASIC1.78□□□□□ -2.12
DDX1Q92499 RNU6-519P-201ENST00000410590 108 ntBASIC1.78□□□□□ -2.12
DDX1Q92499 AC133485.1-201ENST00000567176 124 ntBASIC1.78□□□□□ -2.12
DDX1Q92499 AC145423.2-201ENST00000610631 239 ntBASIC1.78□□□□□ -2.12
DDX1Q92499 MIR8081-201ENST00000611533 95 ntBASIC1.78□□□□□ -2.12
DDX1Q92499 MIR6740-201ENST00000618268 113 ntBASIC1.78□□□□□ -2.12
DDX1Q92499 MIR588-201ENST00000384900 83 ntBASIC1.77□□□□□ -2.13
DDX1Q92499 MIR889-201ENST00000401280 79 ntBASIC1.77□□□□□ -2.13
DDX1Q92499 MIR1236-201ENST00000408340 102 ntBASIC1.77□□□□□ -2.13
DDX1Q92499 RNU6-850P-201ENST00000516934 103 ntBASIC1.77□□□□□ -2.13
DDX1Q92499 RMST_2.1-201ENST00000617263 136 ntBASIC1.77□□□□□ -2.13
DDX1Q92499 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
DDX1Q92499 Y_RNA.648-201ENST00000459455 110 ntBASIC1.76□□□□□ -2.13
DDX1Q92499 RNU6-523P-201ENST00000516304 54 ntBASIC1.76□□□□□ -2.13
DDX1Q92499 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
DDX1Q92499 SNORD53B-201ENST00000577887 78 ntBASIC1.76□□□□□ -2.13
DDX1Q92499 AP000753.3-201ENST00000604083 169 ntBASIC1.76□□□□□ -2.13
DDX1Q92499 SNORD115-37-201ENST00000363768 82 ntBASIC1.75□□□□□ -2.13
DDX1Q92499 RNU6-571P-201ENST00000384128 107 ntBASIC1.75□□□□□ -2.13
DDX1Q92499 RNU6-129P-201ENST00000391022 107 ntBASIC1.75□□□□□ -2.13
DDX1Q92499 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
DDX1Q92499 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.75□□□□□ -2.13
DDX1Q92499 SNORD36A-201ENST00000362874 73 ntBASIC1.74□□□□□ -2.13
DDX1Q92499 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.74□□□□□ -2.13
DDX1Q92499 RNU1-123P-201ENST00000458950 160 ntBASIC1.74□□□□□ -2.13
DDX1Q92499 RNU6-557P-201ENST00000516842 110 ntBASIC1.74□□□□□ -2.13
DDX1Q92499 MIR4500-201ENST00000579472 76 ntBASIC1.74□□□□□ -2.13
DDX1Q92499 Y_RNA.57-201ENST00000362806 113 ntBASIC1.73□□□□□ -2.13
DDX1Q92499 Y_RNA.119-201ENST00000363301 96 ntBASIC1.73□□□□□ -2.13
DDX1Q92499 RNU6-788P-201ENST00000390967 104 ntBASIC1.73□□□□□ -2.13
DDX1Q92499 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.73□□□□□ -2.13
DDX1Q92499 AL450471.1-201ENST00000447509 127 ntBASIC1.73□□□□□ -2.13
DDX1Q92499 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.73□□□□□ -2.13
DDX1Q92499 RNU6-165P-201ENST00000517170 99 ntBASIC1.73□□□□□ -2.13
DDX1Q92499 uc_338.6-201ENST00000613544 171 ntBASIC1.73□□□□□ -2.13
DDX1Q92499 U6.109-201ENST00000636749 87 ntBASIC1.73□□□□□ -2.13
DDX1Q92499 RNU6-396P-201ENST00000365369 105 ntBASIC1.72□□□□□ -2.13
DDX1Q92499 Y_RNA.565-201ENST00000384719 101 ntBASIC1.72□□□□□ -2.13
DDX1Q92499 MT-TN-201ENST00000387400 73 ntBASIC1.72□□□□□ -2.13
DDX1Q92499 MIR4264-201ENST00000583520 66 ntBASIC1.72□□□□□ -2.13
DDX1Q92499 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.72□□□□□ -2.13
DDX1Q92499 MIRLET7A1-201ENST00000362295 80 ntBASIC1.71□□□□□ -2.14
DDX1Q92499 RNU6-580P-201ENST00000365159 107 ntBASIC1.71□□□□□ -2.14
DDX1Q92499 RNU6-1165P-201ENST00000410119 107 ntBASIC1.71□□□□□ -2.14
DDX1Q92499 RNU6-1054P-201ENST00000411293 104 ntBASIC1.71□□□□□ -2.14
DDX1Q92499 BX276092.1-201ENST00000427368 251 ntBASIC1.71□□□□□ -2.14
DDX1Q92499 RNU6-75P-201ENST00000515944 104 ntBASIC1.71□□□□□ -2.14
DDX1Q92499 U7.4-201ENST00000614961 63 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms