Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR524-201ENST00000385242 87 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 RNU2-59P-201ENST00000410482 191 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 snoU13.17-201ENST00000458802 104 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 RN7SL274P-201ENST00000492268 272 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 RNU6-250P-201ENST00000516958 103 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 AP003716.2-201ENST00000528260 108 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 MIR4529-201ENST00000578110 78 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 YWHAEP2-201ENST00000580066 112 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 YWHAEP3-201ENST00000582767 121 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.01□□□□□ -2.09
SHKBP1Q8TBC3 SNORA6-201ENST00000384033 151 ntBASIC2□□□□□ -2.09
SHKBP1Q8TBC3 RNU6-1241P-201ENST00000384536 107 ntBASIC2□□□□□ -2.09
SHKBP1Q8TBC3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2□□□□□ -2.09
SHKBP1Q8TBC3 JTBP1-201ENST00000441314 247 ntBASIC2□□□□□ -2.09
SHKBP1Q8TBC3 MIR6516-201ENST00000630554 81 ntBASIC2□□□□□ -2.09
SHKBP1Q8TBC3 MIR377-201ENST00000362145 69 ntBASIC1.99□□□□□ -2.09
SHKBP1Q8TBC3 Y_RNA.205-201ENST00000364128 113 ntBASIC1.99□□□□□ -2.09
SHKBP1Q8TBC3 RNU6-53P-201ENST00000365367 106 ntBASIC1.99□□□□□ -2.09
SHKBP1Q8TBC3 SNORD30.1-201ENST00000391309 70 ntBASIC1.99□□□□□ -2.09
SHKBP1Q8TBC3 RNU7-193P-201ENST00000516723 65 ntBASIC1.99□□□□□ -2.09
SHKBP1Q8TBC3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.99□□□□□ -2.09
SHKBP1Q8TBC3 AC245884.12-201ENST00000615364 59 ntBASIC1.99□□□□□ -2.09
SHKBP1Q8TBC3 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.99□□□□□ -2.09
SHKBP1Q8TBC3 U6.111-201ENST00000636093 83 ntBASIC1.99□□□□□ -2.09
SHKBP1Q8TBC3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHKBP1Q8TBC3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.98□□□□□ -2.09
SHKBP1Q8TBC3 SNORD115-31-201ENST00000365318 82 ntBASIC1.98□□□□□ -2.09
SHKBP1Q8TBC3 RNU6-1051P-201ENST00000365471 102 ntBASIC1.98□□□□□ -2.09
SHKBP1Q8TBC3 RNU6-800P-201ENST00000384473 103 ntBASIC1.98□□□□□ -2.09
SHKBP1Q8TBC3 SNORD100-201ENST00000408573 76 ntBASIC1.98□□□□□ -2.09
SHKBP1Q8TBC3 TRAJ51-201ENST00000504127 63 ntBASIC1.98□□□□□ -2.09
SHKBP1Q8TBC3 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
SHKBP1Q8TBC3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.98□□□□□ -2.09
SHKBP1Q8TBC3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.98□□□□□ -2.09
SHKBP1Q8TBC3 RNU6-330P-201ENST00000363015 107 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 RNU1-36P-201ENST00000365130 165 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 RNU6-439P-201ENST00000384188 106 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 MIR9-3-201ENST00000385084 90 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 MIR519A1-201ENST00000385257 85 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 MIR942-201ENST00000401111 86 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 MIR1185-1-201ENST00000408598 86 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 RNU7-195P-201ENST00000458793 62 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 RNU11-2P-201ENST00000516898 142 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
SHKBP1Q8TBC3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHKBP1Q8TBC3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SHKBP1Q8TBC3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.96□□□□□ -2.1
SHKBP1Q8TBC3 RNU6-580P-201ENST00000365159 107 ntBASIC1.96□□□□□ -2.1
SHKBP1Q8TBC3 RNU6-154P-201ENST00000384306 106 ntBASIC1.96□□□□□ -2.1
SHKBP1Q8TBC3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.96□□□□□ -2.1
SHKBP1Q8TBC3 MIR154-201ENST00000385243 84 ntBASIC1.96□□□□□ -2.1
SHKBP1Q8TBC3 SNORD93-201ENST00000408813 74 ntBASIC1.96□□□□□ -2.1
SHKBP1Q8TBC3 AC015688.6-201ENST00000577737 104 ntBASIC1.96□□□□□ -2.1
SHKBP1Q8TBC3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.96□□□□□ -2.1
SHKBP1Q8TBC3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 Y_RNA.207-201ENST00000364142 106 ntBASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 RNU6-654P-201ENST00000364373 107 ntBASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 SNORA8.1-201ENST00000384250 140 ntBASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 SNORA17.3-201ENST00000391159 129 ntBASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 RNA5SP95-201ENST00000410319 137 ntBASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 AL606490.4-201ENST00000423117 127 ntBASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 MIR18B-201ENST00000454574 71 ntBASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 AL133373.1-201ENST00000497098 94 ntBASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 TRDV1-202ENST00000621643 102 ntBASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SHKBP1Q8TBC3 AL359851.1-201ENST00000569460 4997 ntBASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 RNU6-403P-201ENST00000363163 104 ntBASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 RNU6-340P-201ENST00000364005 107 ntBASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 RNU6-291P-201ENST00000384720 107 ntBASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 RNU2-19P-201ENST00000517288 84 ntBASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 SNORA77B-201ENST00000578179 125 ntBASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 AC013244.2-201ENST00000603396 103 ntBASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
SHKBP1Q8TBC3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
SHKBP1Q8TBC3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SHKBP1Q8TBC3 Y_RNA.239-201ENST00000364444 113 ntBASIC1.93□□□□□ -2.1
SHKBP1Q8TBC3 RNU6-471P-201ENST00000383944 106 ntBASIC1.93□□□□□ -2.1
SHKBP1Q8TBC3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SHKBP1Q8TBC3 RNU6-663P-201ENST00000391105 106 ntBASIC1.93□□□□□ -2.1
SHKBP1Q8TBC3 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
SHKBP1Q8TBC3 RNU6-947P-201ENST00000516264 106 ntBASIC1.93□□□□□ -2.1
SHKBP1Q8TBC3 RNU7-156P-201ENST00000517214 74 ntBASIC1.93□□□□□ -2.1
SHKBP1Q8TBC3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.93□□□□□ -2.1
SHKBP1Q8TBC3 MIR103A2-201ENST00000362154 78 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 MIR101-2-201ENST00000362195 79 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 RNU6-1260P-201ENST00000362944 107 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 RNA5SP264-201ENST00000363115 107 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 RNA5SP190-201ENST00000365222 118 ntBASIC1.92□□□□□ -2.1
SHKBP1Q8TBC3 Y_RNA.371-201ENST00000365591 113 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms