Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC020891.4-201ENST00000605745 93 ntBASIC1.25□□□□□ -2.21
SMC1BQ8NDV3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SMC1BQ8NDV3 RNU6-403P-201ENST00000363163 104 ntBASIC1.24□□□□□ -2.21
SMC1BQ8NDV3 SNORA72.6-201ENST00000384520 129 ntBASIC1.24□□□□□ -2.21
SMC1BQ8NDV3 MIR532-201ENST00000385025 91 ntBASIC1.24□□□□□ -2.21
SMC1BQ8NDV3 SNORD89-201ENST00000390981 114 ntBASIC1.24□□□□□ -2.21
SMC1BQ8NDV3 SNORA7.5-201ENST00000410672 110 ntBASIC1.24□□□□□ -2.21
SMC1BQ8NDV3 RNU6-733P-201ENST00000410759 104 ntBASIC1.24□□□□□ -2.21
SMC1BQ8NDV3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.24□□□□□ -2.21
SMC1BQ8NDV3 AC068339.1-201ENST00000526965 141 ntBASIC1.24□□□□□ -2.21
SMC1BQ8NDV3 DEFB131E-201ENST00000532329 154 ntBASIC1.24□□□□□ -2.21
SMC1BQ8NDV3 RNY1P2-201ENST00000364820 117 ntBASIC1.23□□□□□ -2.21
SMC1BQ8NDV3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.23□□□□□ -2.21
SMC1BQ8NDV3 RNU6-716P-201ENST00000365621 103 ntBASIC1.23□□□□□ -2.21
SMC1BQ8NDV3 RNU6-589P-201ENST00000516485 107 ntBASIC1.23□□□□□ -2.21
SMC1BQ8NDV3 RNU7-156P-201ENST00000517214 74 ntBASIC1.23□□□□□ -2.21
SMC1BQ8NDV3 MIR4491-201ENST00000581087 68 ntBASIC1.23□□□□□ -2.21
SMC1BQ8NDV3 U6.109-201ENST00000636749 87 ntBASIC1.23□□□□□ -2.21
SMC1BQ8NDV3 AL512310.12-203ENST00000640543 90 ntBASIC1.23□□□□□ -2.21
SMC1BQ8NDV3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SMC1BQ8NDV3 RNA5SP133-201ENST00000363368 119 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 RNU6-1107P-201ENST00000364817 104 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 MIR520F-201ENST00000384824 87 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 MIR936-201ENST00000401264 98 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 Y_RNA.709-201ENST00000516952 92 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 MIR5009-201ENST00000578736 100 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 MIR4804-201ENST00000581683 73 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 AC025627.3-201ENST00000582078 182 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 AP001362.1-201ENST00000625165 124 ntBASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
SMC1BQ8NDV3 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
SMC1BQ8NDV3 U8.6-201ENST00000364939 135 ntBASIC1.21□□□□□ -2.22
SMC1BQ8NDV3 RNU6-35P-201ENST00000384530 107 ntBASIC1.21□□□□□ -2.22
SMC1BQ8NDV3 RNU1-119P-201ENST00000391122 165 ntBASIC1.21□□□□□ -2.22
SMC1BQ8NDV3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.21□□□□□ -2.22
SMC1BQ8NDV3 RNU6-1018P-201ENST00000516577 106 ntBASIC1.21□□□□□ -2.22
SMC1BQ8NDV3 SNORD114-21-201ENST00000606412 72 ntBASIC1.21□□□□□ -2.22
SMC1BQ8NDV3 RNU4-58P-201ENST00000363192 141 ntBASIC1.2□□□□□ -2.22
SMC1BQ8NDV3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SMC1BQ8NDV3 AC096949.1-201ENST00000412047 152 ntBASIC1.2□□□□□ -2.22
SMC1BQ8NDV3 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
SMC1BQ8NDV3 AC138749.4-201ENST00000563970 127 ntBASIC1.2□□□□□ -2.22
SMC1BQ8NDV3 SNORD92-201ENST00000585078 85 ntBASIC1.2□□□□□ -2.22
SMC1BQ8NDV3 RNU4-38P-201ENST00000364472 129 ntBASIC1.19□□□□□ -2.22
SMC1BQ8NDV3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.19□□□□□ -2.22
SMC1BQ8NDV3 RNU6-215P-201ENST00000365169 102 ntBASIC1.19□□□□□ -2.22
SMC1BQ8NDV3 SNORD38.2-201ENST00000384470 69 ntBASIC1.19□□□□□ -2.22
SMC1BQ8NDV3 SNORD20-201ENST00000384550 80 ntBASIC1.19□□□□□ -2.22
SMC1BQ8NDV3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.19□□□□□ -2.22
SMC1BQ8NDV3 PDCD5P2-201ENST00000507570 312 ntBASIC1.19□□□□□ -2.22
SMC1BQ8NDV3 RNU6-919P-201ENST00000516731 104 ntBASIC1.19□□□□□ -2.22
SMC1BQ8NDV3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.19□□□□□ -2.22
SMC1BQ8NDV3 MIR6082-201ENST00000613604 109 ntBASIC1.19□□□□□ -2.22
SMC1BQ8NDV3 MIR330-201ENST00000362196 94 ntBASIC1.18□□□□□ -2.22
SMC1BQ8NDV3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.18□□□□□ -2.22
SMC1BQ8NDV3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.18□□□□□ -2.22
SMC1BQ8NDV3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.18□□□□□ -2.22
SMC1BQ8NDV3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SMC1BQ8NDV3 RNU6-679P-201ENST00000391003 106 ntBASIC1.18□□□□□ -2.22
SMC1BQ8NDV3 RNA5SP255-201ENST00000516370 107 ntBASIC1.18□□□□□ -2.22
SMC1BQ8NDV3 RNU6-765P-201ENST00000516916 99 ntBASIC1.18□□□□□ -2.22
SMC1BQ8NDV3 MIR376B-201ENST00000614515 100 ntBASIC1.18□□□□□ -2.22
SMC1BQ8NDV3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.17□□□□□ -2.22
SMC1BQ8NDV3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.17□□□□□ -2.22
SMC1BQ8NDV3 MIR605-201ENST00000385078 83 ntBASIC1.17□□□□□ -2.22
SMC1BQ8NDV3 SNORD105-201ENST00000386910 85 ntBASIC1.17□□□□□ -2.22
SMC1BQ8NDV3 RNU7-56P-201ENST00000458744 62 ntBASIC1.17□□□□□ -2.22
SMC1BQ8NDV3 RNU7-102P-201ENST00000458948 62 ntBASIC1.17□□□□□ -2.22
SMC1BQ8NDV3 SNORA25.16-201ENST00000516741 121 ntBASIC1.17□□□□□ -2.22
SMC1BQ8NDV3 MIR4661-201ENST00000582720 75 ntBASIC1.17□□□□□ -2.22
SMC1BQ8NDV3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
SMC1BQ8NDV3 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
SMC1BQ8NDV3 MIR34C-201ENST00000384831 77 ntBASIC1.16□□□□□ -2.22
SMC1BQ8NDV3 MIR520H-201ENST00000385126 88 ntBASIC1.16□□□□□ -2.22
SMC1BQ8NDV3 MIR1302-5-201ENST00000408164 150 ntBASIC1.16□□□□□ -2.22
SMC1BQ8NDV3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.16□□□□□ -2.22
SMC1BQ8NDV3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.16□□□□□ -2.22
SMC1BQ8NDV3 MIR4694-201ENST00000578534 80 ntBASIC1.16□□□□□ -2.22
SMC1BQ8NDV3 MIR8066-201ENST00000617280 78 ntBASIC1.16□□□□□ -2.22
SMC1BQ8NDV3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.15□□□□□ -2.23
SMC1BQ8NDV3 RNU6-531P-201ENST00000516694 104 ntBASIC1.15□□□□□ -2.23
SMC1BQ8NDV3 MIR4500-201ENST00000579472 76 ntBASIC1.15□□□□□ -2.23
SMC1BQ8NDV3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.15□□□□□ -2.23
SMC1BQ8NDV3 AC096720.1-201ENST00000604441 183 ntBASIC1.15□□□□□ -2.23
SMC1BQ8NDV3 MIR101-2-201ENST00000362195 79 ntBASIC1.14□□□□□ -2.23
SMC1BQ8NDV3 RNY4P18-201ENST00000391107 89 ntBASIC1.14□□□□□ -2.23
SMC1BQ8NDV3 AC004941.2-201ENST00000427009 228 ntBASIC1.14□□□□□ -2.23
SMC1BQ8NDV3 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
SMC1BQ8NDV3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
SMC1BQ8NDV3 RNY3P2-201ENST00000362918 102 ntBASIC1.13□□□□□ -2.23
SMC1BQ8NDV3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.13□□□□□ -2.23
SMC1BQ8NDV3 SNORD38.1-201ENST00000363863 68 ntBASIC1.13□□□□□ -2.23
SMC1BQ8NDV3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.13□□□□□ -2.23
SMC1BQ8NDV3 AL035461.1-201ENST00000421490 332 ntBASIC1.13□□□□□ -2.23
SMC1BQ8NDV3 AL353813.1-201ENST00000440700 253 ntBASIC1.13□□□□□ -2.23
SMC1BQ8NDV3 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
SMC1BQ8NDV3 AP003327.1-201ENST00000529684 127 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 287.6 ms