Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 Y_RNA.448-201ENST00000384185 108 ntBASIC0.48□□□□□ -2.33
RTL3Q8N8U3 SNORA72.6-201ENST00000384520 129 ntBASIC0.48□□□□□ -2.33
RTL3Q8N8U3 RNU6-429P-201ENST00000384582 108 ntBASIC0.48□□□□□ -2.33
RTL3Q8N8U3 MIR140-201ENST00000385282 100 ntBASIC0.48□□□□□ -2.33
RTL3Q8N8U3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.48□□□□□ -2.33
RTL3Q8N8U3 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
RTL3Q8N8U3 MTND5P34-201ENST00000568888 325 ntBASIC0.48□□□□□ -2.33
RTL3Q8N8U3 AL157777.2-201ENST00000258070 137 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 Y_RNA.98-201ENST00000363109 102 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 Y_RNA.328-201ENST00000365208 113 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 RNY1P8-201ENST00000383970 114 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 MIR759-201ENST00000390224 91 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 MIR936-201ENST00000401264 98 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 RNU6-1061P-201ENST00000516530 99 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 AP001362.1-201ENST00000625165 124 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 MIR1255B1-201ENST00000636325 63 ntBASIC0.47□□□□□ -2.33
RTL3Q8N8U3 RNY4P6-201ENST00000363667 96 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 RNA5SP117-201ENST00000365294 118 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 Y_RNA.344-201ENST00000365381 112 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 SNORD116-14-201ENST00000383894 92 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 SNORD116-17-201ENST00000383929 92 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 SNORD116-15-201ENST00000384445 92 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 Y_RNA.525-201ENST00000384570 113 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 RNU6-959P-201ENST00000384671 107 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 Y_RNA.563-201ENST00000384707 108 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 SNORD116-19-201ENST00000384729 92 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 RN7SKP12-201ENST00000516275 143 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 SNORA31.14-201ENST00000516728 116 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 MIR3678-201ENST00000578455 94 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 MIR376B-201ENST00000614515 100 ntBASIC0.46□□□□□ -2.34
RTL3Q8N8U3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.45□□□□□ -2.34
RTL3Q8N8U3 SNORD114-23-201ENST00000363536 72 ntBASIC0.45□□□□□ -2.34
RTL3Q8N8U3 MIR193B-201ENST00000384907 83 ntBASIC0.45□□□□□ -2.34
RTL3Q8N8U3 AL603908.1-201ENST00000406098 201 ntBASIC0.45□□□□□ -2.34
RTL3Q8N8U3 AL353813.1-201ENST00000440700 253 ntBASIC0.45□□□□□ -2.34
RTL3Q8N8U3 TMSB4XP3-201ENST00000445144 114 ntBASIC0.45□□□□□ -2.34
RTL3Q8N8U3 RNU6-135P-201ENST00000516769 101 ntBASIC0.45□□□□□ -2.34
RTL3Q8N8U3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.45□□□□□ -2.34
RTL3Q8N8U3 MIR4679-2-201ENST00000578358 77 ntBASIC0.45□□□□□ -2.34
RTL3Q8N8U3 RNU6-363P-201ENST00000362895 105 ntBASIC0.44□□□□□ -2.34
RTL3Q8N8U3 RNU6-535P-201ENST00000384722 107 ntBASIC0.44□□□□□ -2.34
RTL3Q8N8U3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.44□□□□□ -2.34
RTL3Q8N8U3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
RTL3Q8N8U3 RNU6-521P-201ENST00000516663 105 ntBASIC0.44□□□□□ -2.34
RTL3Q8N8U3 RNA5SP94-201ENST00000516917 108 ntBASIC0.44□□□□□ -2.34
RTL3Q8N8U3 DEFB131E-201ENST00000532329 154 ntBASIC0.44□□□□□ -2.34
RTL3Q8N8U3 MIR1273G-201ENST00000577677 100 ntBASIC0.44□□□□□ -2.34
RTL3Q8N8U3 AC010487.4-201ENST00000637027 61 ntBASIC0.44□□□□□ -2.34
RTL3Q8N8U3 RNA5SP325-201ENST00000363756 130 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 RNU4-67P-201ENST00000364569 141 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 SNORD113-1-201ENST00000365321 69 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 Y_RNA.360-201ENST00000365512 102 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 MIR34C-201ENST00000384831 77 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 AC244505.6-201ENST00000452829 130 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 RNU6-1018P-201ENST00000516577 106 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 RNU6-1006P-201ENST00000516998 103 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 MIR4711-201ENST00000578274 70 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 U6.95-201ENST00000636931 70 ntBASIC0.43□□□□□ -2.34
RTL3Q8N8U3 RNU6-1313P-201ENST00000362622 102 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 SNORA36.1-201ENST00000363424 132 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 RNA5SP245-201ENST00000364239 121 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 RNU6-865P-201ENST00000364772 107 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 Y_RNA.353-201ENST00000365440 108 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 Y_RNA.362-201ENST00000365518 110 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 MIR644A-201ENST00000385262 94 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 RPL39P34-201ENST00000477141 156 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 MIR3910-1-201ENST00000580936 111 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 MIR6828-201ENST00000636181 60 ntBASIC0.42□□□□□ -2.34
RTL3Q8N8U3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
RTL3Q8N8U3 MIR101-2-201ENST00000362195 79 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 MIR519A1-201ENST00000385257 85 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 RNU6-679P-201ENST00000391003 106 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 MIR548I2-201ENST00000408348 149 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 SNRPGP12-201ENST00000449481 213 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 SNORD33.1-201ENST00000516213 88 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 RNA5SP47-201ENST00000517230 109 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.41□□□□□ -2.34
RTL3Q8N8U3 MIR4639-201ENST00000584938 69 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 AL035470.1-201ENST00000622571 220 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 AL162726.3-218ENST00000636401 95 ntBASIC0.41□□□□□ -2.34
RTL3Q8N8U3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
RTL3Q8N8U3 SNORA63.5-201ENST00000363548 123 ntBASIC0.4□□□□□ -2.35
RTL3Q8N8U3 RNA5SP517-201ENST00000364724 117 ntBASIC0.4□□□□□ -2.35
RTL3Q8N8U3 RNU6-571P-201ENST00000384128 107 ntBASIC0.4□□□□□ -2.35
RTL3Q8N8U3 SNORD28-201ENST00000384706 75 ntBASIC0.4□□□□□ -2.35
RTL3Q8N8U3 RNU6-1333P-201ENST00000516162 93 ntBASIC0.4□□□□□ -2.35
RTL3Q8N8U3 RNU6-469P-201ENST00000516253 101 ntBASIC0.4□□□□□ -2.35
RTL3Q8N8U3 MIR4500-201ENST00000579472 76 ntBASIC0.4□□□□□ -2.35
RTL3Q8N8U3 MIR548H5-201ENST00000580314 60 ntBASIC0.4□□□□□ -2.35
RTL3Q8N8U3 RNU7-10P-201ENST00000607194 63 ntBASIC0.4□□□□□ -2.35
RTL3Q8N8U3 SNORA8.2-201ENST00000384372 139 ntBASIC0.39□□□□□ -2.35
RTL3Q8N8U3 MIR1912-201ENST00000410389 80 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 206.9 ms