Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.78□□□□□ -2.28
APLFQ8IW19 RNU7-156P-201ENST00000517214 74 ntBASIC0.78□□□□□ -2.28
APLFQ8IW19 MIR4804-201ENST00000581683 73 ntBASIC0.78□□□□□ -2.28
APLFQ8IW19 RNU6-363P-201ENST00000362895 105 ntBASIC0.77□□□□□ -2.29
APLFQ8IW19 Y_RNA.309-201ENST00000365046 111 ntBASIC0.77□□□□□ -2.29
APLFQ8IW19 RNU6-429P-201ENST00000384582 108 ntBASIC0.77□□□□□ -2.29
APLFQ8IW19 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
APLFQ8IW19 U7.7-201ENST00000459276 60 ntBASIC0.77□□□□□ -2.29
APLFQ8IW19 RNA5SP255-201ENST00000516370 107 ntBASIC0.77□□□□□ -2.29
APLFQ8IW19 RNU6-412P-201ENST00000516434 106 ntBASIC0.77□□□□□ -2.29
APLFQ8IW19 DEFB131E-201ENST00000532329 154 ntBASIC0.77□□□□□ -2.29
APLFQ8IW19 AC138749.4-201ENST00000563970 127 ntBASIC0.77□□□□□ -2.29
APLFQ8IW19 Y_RNA.13-201ENST00000362403 112 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 Y_RNA.85-201ENST00000363014 111 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 Y_RNA.281-201ENST00000364774 94 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 Y_RNA.328-201ENST00000365208 113 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 RNU6-1335P-201ENST00000365426 107 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 RNU6-409P-201ENST00000384114 104 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 MIR216A-201ENST00000385063 110 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 SNORD105-201ENST00000386910 85 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 RNU1-119P-201ENST00000391122 165 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 RNU6-733P-201ENST00000410759 104 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 RNU7-102P-201ENST00000458948 62 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 SNORA25.16-201ENST00000516741 121 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 MIR4714-201ENST00000580728 77 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 SNORD92-201ENST00000585078 85 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 MIR8066-201ENST00000617280 78 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 AP001362.1-201ENST00000625165 124 ntBASIC0.76□□□□□ -2.29
APLFQ8IW19 Y_RNA.42-201ENST00000362660 108 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 Y_RNA.49-201ENST00000362714 112 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 Y_RNA.98-201ENST00000363109 102 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 RNA5SP325-201ENST00000363756 130 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 Y_RNA.205-201ENST00000364128 113 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 RNU6-1107P-201ENST00000364817 104 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 RNY1P2-201ENST00000364820 117 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 U8.6-201ENST00000364939 135 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 MIR520H-201ENST00000385126 88 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 RNU7-56P-201ENST00000458744 62 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.75□□□□□ -2.29
APLFQ8IW19 RNU6-531P-201ENST00000516694 104 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 AC068339.1-201ENST00000526965 141 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 MIR6082-201ENST00000613604 109 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 MIR376B-201ENST00000614515 100 ntBASIC0.75□□□□□ -2.29
APLFQ8IW19 RNU6-1325P-201ENST00000364905 105 ntBASIC0.74□□□□□ -2.29
APLFQ8IW19 MIR34C-201ENST00000384831 77 ntBASIC0.74□□□□□ -2.29
APLFQ8IW19 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
APLFQ8IW19 RNU6-679P-201ENST00000391003 106 ntBASIC0.74□□□□□ -2.29
APLFQ8IW19 RNU6-589P-201ENST00000516485 107 ntBASIC0.74□□□□□ -2.29
APLFQ8IW19 AC138907.6-201ENST00000568401 126 ntBASIC0.74□□□□□ -2.29
APLFQ8IW19 AC025627.3-201ENST00000582078 182 ntBASIC0.74□□□□□ -2.29
APLFQ8IW19 AC008608.1-201ENST00000603910 127 ntBASIC0.74□□□□□ -2.29
APLFQ8IW19 MIR6513-201ENST00000621188 64 ntBASIC0.74□□□□□ -2.29
APLFQ8IW19 AL512310.12-203ENST00000640543 90 ntBASIC0.74□□□□□ -2.29
APLFQ8IW19 RNU4-58P-201ENST00000363192 141 ntBASIC0.73□□□□□ -2.29
APLFQ8IW19 Y_RNA.119-201ENST00000363301 96 ntBASIC0.73□□□□□ -2.29
APLFQ8IW19 Y_RNA.360-201ENST00000365512 102 ntBASIC0.73□□□□□ -2.29
APLFQ8IW19 RNY1P4-201ENST00000384595 115 ntBASIC0.73□□□□□ -2.29
APLFQ8IW19 AL353813.1-201ENST00000440700 253 ntBASIC0.73□□□□□ -2.29
APLFQ8IW19 MIR5009-201ENST00000578736 100 ntBASIC0.73□□□□□ -2.29
APLFQ8IW19 AC090897.1-201ENST00000580909 226 ntBASIC0.73□□□□□ -2.29
APLFQ8IW19 MIR4661-201ENST00000582720 75 ntBASIC0.73□□□□□ -2.29
APLFQ8IW19 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.73□□□□□ -2.29
APLFQ8IW19 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
APLFQ8IW19 RNU6-1313P-201ENST00000362622 102 ntBASIC0.72□□□□□ -2.29
APLFQ8IW19 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
APLFQ8IW19 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
APLFQ8IW19 RNU6-1018P-201ENST00000516577 106 ntBASIC0.72□□□□□ -2.29
APLFQ8IW19 RNU6-765P-201ENST00000516916 99 ntBASIC0.72□□□□□ -2.29
APLFQ8IW19 Y_RNA.709-201ENST00000516952 92 ntBASIC0.72□□□□□ -2.29
APLFQ8IW19 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
APLFQ8IW19 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
APLFQ8IW19 Y_RNA.323-201ENST00000365157 109 ntBASIC0.71□□□□□ -2.3
APLFQ8IW19 RNU6-215P-201ENST00000365169 102 ntBASIC0.71□□□□□ -2.3
APLFQ8IW19 RNU6-1201P-201ENST00000384227 107 ntBASIC0.71□□□□□ -2.3
APLFQ8IW19 SNORD20-201ENST00000384550 80 ntBASIC0.71□□□□□ -2.3
APLFQ8IW19 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
APLFQ8IW19 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.71□□□□□ -2.3
APLFQ8IW19 MIR4500-201ENST00000579472 76 ntBASIC0.71□□□□□ -2.3
APLFQ8IW19 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
APLFQ8IW19 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
APLFQ8IW19 MIR101-2-201ENST00000362195 79 ntBASIC0.7□□□□□ -2.3
APLFQ8IW19 RNU6-1014P-201ENST00000383940 103 ntBASIC0.7□□□□□ -2.3
APLFQ8IW19 SNORD38.2-201ENST00000384470 69 ntBASIC0.7□□□□□ -2.3
APLFQ8IW19 MIR573-201ENST00000384964 99 ntBASIC0.7□□□□□ -2.3
APLFQ8IW19 RNU6-1194P-201ENST00000516208 104 ntBASIC0.7□□□□□ -2.3
APLFQ8IW19 Y_RNA.697-201ENST00000516776 113 ntBASIC0.7□□□□□ -2.3
APLFQ8IW19 RNU6-448P-201ENST00000517052 107 ntBASIC0.7□□□□□ -2.3
APLFQ8IW19 AP003327.1-201ENST00000529684 127 ntBASIC0.7□□□□□ -2.3
APLFQ8IW19 MIR4694-201ENST00000578534 80 ntBASIC0.7□□□□□ -2.3
APLFQ8IW19 MIR577-201ENST00000385196 96 ntBASIC0.69□□□□□ -2.3
APLFQ8IW19 RNU6-1006P-201ENST00000516998 103 ntBASIC0.69□□□□□ -2.3
APLFQ8IW19 AC011195.1-201ENST00000578177 177 ntBASIC0.69□□□□□ -2.3
APLFQ8IW19 uc_338.28-201ENST00000612082 187 ntBASIC0.69□□□□□ -2.3
APLFQ8IW19 AL442128.1-201ENST00000615151 90 ntBASIC0.69□□□□□ -2.3
APLFQ8IW19 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.69□□□□□ -2.3
APLFQ8IW19 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
APLFQ8IW19 Y_RNA.163-201ENST00000363702 113 ntBASIC0.68□□□□□ -2.3
APLFQ8IW19 Y_RNA.247-201ENST00000364500 92 ntBASIC0.68□□□□□ -2.3
APLFQ8IW19 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 287.8 ms