Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.06□□□□□ -2.42
PRPF39Q86UA1 RNU6-463P-201ENST00000384340 107 ntBASIC-0.06□□□□□ -2.42
PRPF39Q86UA1 RNA5SP285-201ENST00000516619 119 ntBASIC-0.06□□□□□ -2.42
PRPF39Q86UA1 AP002392.1-201ENST00000537692 208 ntBASIC-0.06□□□□□ -2.42
PRPF39Q86UA1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.07□□□□□ -2.42
PRPF39Q86UA1 RNU6-726P-201ENST00000364680 107 ntBASIC-0.07□□□□□ -2.42
PRPF39Q86UA1 MIR206-201ENST00000384872 86 ntBASIC-0.07□□□□□ -2.42
PRPF39Q86UA1 MIR145-201ENST00000384967 88 ntBASIC-0.07□□□□□ -2.42
PRPF39Q86UA1 SNORA70.25-201ENST00000612741 95 ntBASIC-0.07□□□□□ -2.42
PRPF39Q86UA1 MIR1270-201ENST00000459320 83 ntBASIC-0.08□□□□□ -2.42
PRPF39Q86UA1 RNU7-161P-201ENST00000517289 62 ntBASIC-0.08□□□□□ -2.42
PRPF39Q86UA1 MIR4290-201ENST00000583807 95 ntBASIC-0.08□□□□□ -2.42
PRPF39Q86UA1 MIR4719-201ENST00000585233 84 ntBASIC-0.08□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.09□□□□□ -2.42
PRPF39Q86UA1 RNU6-309P-201ENST00000364573 106 ntBASIC-0.09□□□□□ -2.42
PRPF39Q86UA1 RNU6-865P-201ENST00000364772 107 ntBASIC-0.09□□□□□ -2.42
PRPF39Q86UA1 RNU6-756P-201ENST00000383997 107 ntBASIC-0.09□□□□□ -2.42
PRPF39Q86UA1 MIR329-2-201ENST00000385029 84 ntBASIC-0.09□□□□□ -2.42
PRPF39Q86UA1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.09□□□□□ -2.42
PRPF39Q86UA1 AL137067.1-201ENST00000615933 120 ntBASIC-0.09□□□□□ -2.42
PRPF39Q86UA1 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.1□□□□□ -2.43
PRPF39Q86UA1 RNU6-652P-201ENST00000365488 107 ntBASIC-0.1□□□□□ -2.43
PRPF39Q86UA1 MIR599-201ENST00000385069 95 ntBASIC-0.1□□□□□ -2.43
PRPF39Q86UA1 MIR892B-201ENST00000401279 77 ntBASIC-0.1□□□□□ -2.43
PRPF39Q86UA1 AL603914.1-201ENST00000401964 204 ntBASIC-0.1□□□□□ -2.43
PRPF39Q86UA1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.1□□□□□ -2.43
PRPF39Q86UA1 U7.6-201ENST00000610841 64 ntBASIC-0.1□□□□□ -2.43
PRPF39Q86UA1 AP001362.1-201ENST00000625165 124 ntBASIC-0.1□□□□□ -2.43
PRPF39Q86UA1 RNU6-508P-201ENST00000363231 103 ntBASIC-0.11□□□□□ -2.43
PRPF39Q86UA1 RNU6-929P-201ENST00000384429 107 ntBASIC-0.11□□□□□ -2.43
PRPF39Q86UA1 MIR501-201ENST00000390204 84 ntBASIC-0.11□□□□□ -2.43
PRPF39Q86UA1 RNU7-2P-201ENST00000516096 62 ntBASIC-0.11□□□□□ -2.43
PRPF39Q86UA1 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.11□□□□□ -2.43
PRPF39Q86UA1 RNU7-121P-201ENST00000516604 62 ntBASIC-0.11□□□□□ -2.43
PRPF39Q86UA1 RNY4P20-201ENST00000516678 93 ntBASIC-0.11□□□□□ -2.43
PRPF39Q86UA1 BX276092.1-201ENST00000427368 251 ntBASIC-0.12□□□□□ -2.43
PRPF39Q86UA1 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.12□□□□□ -2.43
PRPF39Q86UA1 AL162376.1-201ENST00000624117 175 ntBASIC-0.12□□□□□ -2.43
PRPF39Q86UA1 AC097635.1-201ENST00000450678 155 ntBASIC-0.13□□□□□ -2.43
PRPF39Q86UA1 TRAJ51-201ENST00000504127 63 ntBASIC-0.13□□□□□ -2.43
PRPF39Q86UA1 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.13□□□□□ -2.43
PRPF39Q86UA1 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.13□□□□□ -2.43
PRPF39Q86UA1 MIR5706-201ENST00000579841 80 ntBASIC-0.13□□□□□ -2.43
PRPF39Q86UA1 AC141273.2-201ENST00000618989 130 ntBASIC-0.13□□□□□ -2.43
PRPF39Q86UA1 AC073869.9-201ENST00000641610 120 ntBASIC-0.13□□□□□ -2.43
PRPF39Q86UA1 RNA5SP403-201ENST00000363598 108 ntBASIC-0.14□□□□□ -2.43
PRPF39Q86UA1 RNY1P11-201ENST00000363759 113 ntBASIC-0.14□□□□□ -2.43
PRPF39Q86UA1 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.14□□□□□ -2.43
PRPF39Q86UA1 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.14□□□□□ -2.43
PRPF39Q86UA1 RNU6-449P-201ENST00000383914 107 ntBASIC-0.14□□□□□ -2.43
PRPF39Q86UA1 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.14□□□□□ -2.43
PRPF39Q86UA1 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.14□□□□□ -2.43
PRPF39Q86UA1 AC141557.1-201ENST00000540982 400 ntBASIC-0.14□□□□□ -2.43
PRPF39Q86UA1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.14□□□□□ -2.43
PRPF39Q86UA1 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.15□□□□□ -2.43
PRPF39Q86UA1 RNU6-616P-201ENST00000384353 107 ntBASIC-0.15□□□□□ -2.43
PRPF39Q86UA1 MIR106A-201ENST00000384870 81 ntBASIC-0.15□□□□□ -2.43
PRPF39Q86UA1 RNU6-269P-201ENST00000391077 97 ntBASIC-0.15□□□□□ -2.43
PRPF39Q86UA1 MIR548I2-201ENST00000408348 149 ntBASIC-0.15□□□□□ -2.43
PRPF39Q86UA1 RNU6-861P-201ENST00000516745 106 ntBASIC-0.15□□□□□ -2.43
PRPF39Q86UA1 RNU6-782P-201ENST00000516852 104 ntBASIC-0.15□□□□□ -2.43
PRPF39Q86UA1 MIR3925-201ENST00000584674 77 ntBASIC-0.15□□□□□ -2.43
PRPF39Q86UA1 MIR6759-201ENST00000638110 65 ntBASIC-0.15□□□□□ -2.43
PRPF39Q86UA1 RNU4-11P-201ENST00000365287 132 ntBASIC-0.16□□□□□ -2.44
PRPF39Q86UA1 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.16□□□□□ -2.44
PRPF39Q86UA1 RNU6V-201ENST00000384105 107 ntBASIC-0.16□□□□□ -2.44
PRPF39Q86UA1 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.16□□□□□ -2.44
PRPF39Q86UA1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.16□□□□□ -2.44
PRPF39Q86UA1 MIR4743-201ENST00000584576 69 ntBASIC-0.16□□□□□ -2.44
PRPF39Q86UA1 RNU6-161P-201ENST00000363051 106 ntBASIC-0.17□□□□□ -2.44
PRPF39Q86UA1 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.17□□□□□ -2.44
PRPF39Q86UA1 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 SNORD115-35-201ENST00000365122 82 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 SNORD41.1-201ENST00000391000 69 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 RNA5SP163-201ENST00000410304 99 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 RNU7-159P-201ENST00000459284 62 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 RNU7-6P-201ENST00000516845 62 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 MIR548AD-201ENST00000584780 82 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 AC108081.1-201ENST00000604358 221 ntBASIC-0.18□□□□□ -2.44
PRPF39Q86UA1 RNU7-120P-201ENST00000459334 63 ntBASIC-0.19□□□□□ -2.44
PRPF39Q86UA1 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.19□□□□□ -2.44
PRPF39Q86UA1 uc_338.28-201ENST00000612082 187 ntBASIC-0.19□□□□□ -2.44
PRPF39Q86UA1 MIR376B-201ENST00000614515 100 ntBASIC-0.19□□□□□ -2.44
PRPF39Q86UA1 AC099654.10-201ENST00000640395 161 ntBASIC-0.19□□□□□ -2.44
PRPF39Q86UA1 RNU6-170P-201ENST00000362832 104 ntBASIC-0.2□□□□□ -2.44
PRPF39Q86UA1 RNU6-509P-201ENST00000363519 107 ntBASIC-0.2□□□□□ -2.44
PRPF39Q86UA1 RNU6-200P-201ENST00000364743 107 ntBASIC-0.2□□□□□ -2.44
PRPF39Q86UA1 MIR759-201ENST00000390224 91 ntBASIC-0.2□□□□□ -2.44
PRPF39Q86UA1 SNORD63B-201ENST00000411005 70 ntBASIC-0.2□□□□□ -2.44
PRPF39Q86UA1 AC006210.1-201ENST00000424882 111 ntBASIC-0.2□□□□□ -2.44
PRPF39Q86UA1 RNU7-195P-201ENST00000458793 62 ntBASIC-0.2□□□□□ -2.44
PRPF39Q86UA1 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.2□□□□□ -2.44
PRPF39Q86UA1 MIR4677-201ENST00000584153 80 ntBASIC-0.2□□□□□ -2.44
PRPF39Q86UA1 RNU6-379P-201ENST00000363813 104 ntBASIC-0.21□□□□□ -2.44
PRPF39Q86UA1 RNU6-151P-201ENST00000364158 107 ntBASIC-0.21□□□□□ -2.44
PRPF39Q86UA1 HMGN2P22-201ENST00000427588 175 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms