Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 SNORA2B-201ENST00000384583 137 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 SNORA26.2-201ENST00000390922 122 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 SNORA75.2-201ENST00000391138 150 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 SNORA75.3-201ENST00000391231 150 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 MIR1285-1-201ENST00000408593 84 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 SPINT5P-201ENST00000448174 155 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 snoU13.21-201ENST00000459368 105 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 RNU6-902P-201ENST00000517212 91 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 AC090897.1-201ENST00000580909 226 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 MIR4422-201ENST00000581938 83 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 U6.109-201ENST00000636749 87 ntBASIC1.25□□□□□ -2.21
YTHDF3Q7Z739 Y_RNA.17-201ENST00000362433 111 ntBASIC1.24□□□□□ -2.21
YTHDF3Q7Z739 RNU6-1134P-201ENST00000365156 101 ntBASIC1.24□□□□□ -2.21
YTHDF3Q7Z739 Y_RNA.588-201ENST00000391254 102 ntBASIC1.24□□□□□ -2.21
YTHDF3Q7Z739 MIR18B-201ENST00000454574 71 ntBASIC1.24□□□□□ -2.21
YTHDF3Q7Z739 RN7SKP88-201ENST00000516847 250 ntBASIC1.24□□□□□ -2.21
YTHDF3Q7Z739 7SK.8-201ENST00000612110 250 ntBASIC1.24□□□□□ -2.21
YTHDF3Q7Z739 7SK.11-201ENST00000615477 250 ntBASIC1.24□□□□□ -2.21
YTHDF3Q7Z739 7SK.13-201ENST00000622040 250 ntBASIC1.24□□□□□ -2.21
YTHDF3Q7Z739 RNA5SP133-201ENST00000363368 119 ntBASIC1.23□□□□□ -2.21
YTHDF3Q7Z739 SNORD38.2-201ENST00000384470 69 ntBASIC1.23□□□□□ -2.21
YTHDF3Q7Z739 MIR450A2-201ENST00000385022 100 ntBASIC1.23□□□□□ -2.21
YTHDF3Q7Z739 SNRPGP12-201ENST00000449481 213 ntBASIC1.23□□□□□ -2.21
YTHDF3Q7Z739 SNORA31.2-201ENST00000516019 134 ntBASIC1.23□□□□□ -2.21
YTHDF3Q7Z739 RN7SKP12-201ENST00000516275 143 ntBASIC1.23□□□□□ -2.21
YTHDF3Q7Z739 AC036111.3-201ENST00000526389 112 ntBASIC1.23□□□□□ -2.21
YTHDF3Q7Z739 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.23□□□□□ -2.21
YTHDF3Q7Z739 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
YTHDF3Q7Z739 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 Y_RNA.119-201ENST00000363301 96 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 SNORD116-10-201ENST00000363791 102 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 SNORD114-22-201ENST00000365423 72 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 RNU6-675P-201ENST00000384236 104 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 MIR7-2-201ENST00000384970 110 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 RNU4-83P-201ENST00000410863 133 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 AL591704.2-201ENST00000421658 181 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 MTND5P40-201ENST00000559945 246 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 MIR4491-201ENST00000581087 68 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 RMST_2.1-201ENST00000617263 136 ntBASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
YTHDF3Q7Z739 RNU6-219P-201ENST00000364728 107 ntBASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 RNU1-36P-201ENST00000365130 165 ntBASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 RNU6-53P-201ENST00000365367 106 ntBASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 RNU6-1152P-201ENST00000384576 107 ntBASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 MIR181B2-201ENST00000385004 89 ntBASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 RNU6-592P-201ENST00000411333 103 ntBASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 AL513043.2-201ENST00000573941 143 ntBASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 MIR4500-201ENST00000579472 76 ntBASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 AC025521.1-201ENST00000621624 286 ntBASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
YTHDF3Q7Z739 MIR494-201ENST00000349529 81 ntBASIC1.2□□□□□ -2.22
YTHDF3Q7Z739 MIR26B-201ENST00000362251 77 ntBASIC1.2□□□□□ -2.22
YTHDF3Q7Z739 SNORD113.3-201ENST00000364630 78 ntBASIC1.2□□□□□ -2.22
YTHDF3Q7Z739 RNU6-497P-201ENST00000365316 104 ntBASIC1.2□□□□□ -2.22
YTHDF3Q7Z739 RNU6-820P-201ENST00000384273 107 ntBASIC1.2□□□□□ -2.22
YTHDF3Q7Z739 RNU6-402P-201ENST00000410678 103 ntBASIC1.2□□□□□ -2.22
YTHDF3Q7Z739 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.2□□□□□ -2.22
YTHDF3Q7Z739 RNU7-21P-201ENST00000459430 62 ntBASIC1.2□□□□□ -2.22
YTHDF3Q7Z739 SNORA25.16-201ENST00000516741 121 ntBASIC1.2□□□□□ -2.22
YTHDF3Q7Z739 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
YTHDF3Q7Z739 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 Y_RNA.330-201ENST00000365230 109 ntBASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 SNORD83.1-201ENST00000411362 77 ntBASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 BX276092.1-201ENST00000427368 251 ntBASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 RNU7-185P-201ENST00000459215 60 ntBASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 RNU6-267P-201ENST00000516714 103 ntBASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 RNU6-850P-201ENST00000516934 103 ntBASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 AC103810.9-201ENST00000606688 112 ntBASIC1.19□□□□□ -2.22
YTHDF3Q7Z739 RNA5SP173-201ENST00000364857 136 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 RNU6-571P-201ENST00000384128 107 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 SNORD116-22-201ENST00000384430 92 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 RNU6-910P-201ENST00000390844 107 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 SNORD93-201ENST00000408813 74 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 Y_RNA.620-201ENST00000411009 88 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 AC015818.7-201ENST00000428754 109 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 AC087499.7-201ENST00000441958 109 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 SNORD79.1-201ENST00000516069 84 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 RNU6-531P-201ENST00000516694 104 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 MIR4668-201ENST00000582284 70 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 AC106800.4-201ENST00000614905 153 ntBASIC1.18□□□□□ -2.22
YTHDF3Q7Z739 AC023934.1-201ENST00000574529 2389 ntBASIC1.17□□□□□ -2.22
YTHDF3Q7Z739 RNU6-369P-201ENST00000362515 102 ntBASIC1.17□□□□□ -2.22
YTHDF3Q7Z739 Y_RNA.73-201ENST00000362910 113 ntBASIC1.17□□□□□ -2.22
YTHDF3Q7Z739 RNU6-1125P-201ENST00000363601 107 ntBASIC1.17□□□□□ -2.22
YTHDF3Q7Z739 RNU6-480P-201ENST00000384332 107 ntBASIC1.17□□□□□ -2.22
YTHDF3Q7Z739 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.17□□□□□ -2.22
YTHDF3Q7Z739 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
YTHDF3Q7Z739 RNU6-573P-201ENST00000383938 106 ntBASIC1.16□□□□□ -2.22
YTHDF3Q7Z739 RNA5SP480-201ENST00000516840 109 ntBASIC1.16□□□□□ -2.22
YTHDF3Q7Z739 AC023827.1-201ENST00000569247 97 ntBASIC1.16□□□□□ -2.22
YTHDF3Q7Z739 MIR8066-201ENST00000617280 78 ntBASIC1.16□□□□□ -2.22
YTHDF3Q7Z739 RNU6-934P-201ENST00000365154 107 ntBASIC1.15□□□□□ -2.23
YTHDF3Q7Z739 SNORA80D-201ENST00000384488 135 ntBASIC1.15□□□□□ -2.23
YTHDF3Q7Z739 RNY1P4-201ENST00000384595 115 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms