Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MIR548X2-201ENST00000579776 100 ntBASIC0.33□□□□□ -2.36
NPHP3Q7Z494 MIR101-2-201ENST00000362195 79 ntBASIC0.32□□□□□ -2.36
NPHP3Q7Z494 RNY1P2-201ENST00000364820 117 ntBASIC0.32□□□□□ -2.36
NPHP3Q7Z494 MT-TI-201ENST00000387365 69 ntBASIC0.32□□□□□ -2.36
NPHP3Q7Z494 RNU6-1307P-201ENST00000391012 103 ntBASIC0.32□□□□□ -2.36
NPHP3Q7Z494 Y_RNA.692-201ENST00000516627 105 ntBASIC0.32□□□□□ -2.36
NPHP3Q7Z494 MIR5190-201ENST00000581537 80 ntBASIC0.32□□□□□ -2.36
NPHP3Q7Z494 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.32□□□□□ -2.36
NPHP3Q7Z494 AC021753.1-201ENST00000635724 168 ntBASIC0.32□□□□□ -2.36
NPHP3Q7Z494 Y_RNA.114-201ENST00000363265 113 ntBASIC0.31□□□□□ -2.36
NPHP3Q7Z494 Y_RNA.215-201ENST00000364204 112 ntBASIC0.31□□□□□ -2.36
NPHP3Q7Z494 Y_RNA.420-201ENST00000384043 110 ntBASIC0.31□□□□□ -2.36
NPHP3Q7Z494 Y_RNA.448-201ENST00000384185 108 ntBASIC0.31□□□□□ -2.36
NPHP3Q7Z494 RNU6-616P-201ENST00000384353 107 ntBASIC0.31□□□□□ -2.36
NPHP3Q7Z494 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
NPHP3Q7Z494 RNA5SP47-201ENST00000517230 109 ntBASIC0.31□□□□□ -2.36
NPHP3Q7Z494 AC098479.1-201ENST00000609225 154 ntBASIC0.31□□□□□ -2.36
NPHP3Q7Z494 Y_RNA.400-201ENST00000383963 111 ntBASIC0.3□□□□□ -2.36
NPHP3Q7Z494 SNORD28-201ENST00000384706 75 ntBASIC0.3□□□□□ -2.36
NPHP3Q7Z494 SNORD77B-201ENST00000391112 67 ntBASIC0.3□□□□□ -2.36
NPHP3Q7Z494 SNRPGP12-201ENST00000449481 213 ntBASIC0.3□□□□□ -2.36
NPHP3Q7Z494 AP001328.1-201ENST00000528550 176 ntBASIC0.3□□□□□ -2.36
NPHP3Q7Z494 MIR7107-201ENST00000611489 80 ntBASIC0.3□□□□□ -2.36
NPHP3Q7Z494 AC244669.1-204ENST00000621564 178 ntBASIC0.3□□□□□ -2.36
NPHP3Q7Z494 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.3□□□□□ -2.36
NPHP3Q7Z494 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
NPHP3Q7Z494 RNU6-1229P-201ENST00000364295 107 ntBASIC0.29□□□□□ -2.36
NPHP3Q7Z494 MIR569-201ENST00000385228 96 ntBASIC0.29□□□□□ -2.36
NPHP3Q7Z494 MIRLET7F2-201ENST00000385277 83 ntBASIC0.29□□□□□ -2.36
NPHP3Q7Z494 AC069271.1-201ENST00000445577 156 ntBASIC0.29□□□□□ -2.36
NPHP3Q7Z494 RNU7-48P-201ENST00000458875 63 ntBASIC0.29□□□□□ -2.36
NPHP3Q7Z494 RN7SKP19-201ENST00000516016 252 ntBASIC0.29□□□□□ -2.36
NPHP3Q7Z494 RNU6-794P-201ENST00000517261 64 ntBASIC0.29□□□□□ -2.36
NPHP3Q7Z494 MIR4500-201ENST00000579472 76 ntBASIC0.29□□□□□ -2.36
NPHP3Q7Z494 AP001340.1-201ENST00000624405 217 ntBASIC0.29□□□□□ -2.36
NPHP3Q7Z494 Y_RNA.49-201ENST00000362714 112 ntBASIC0.28□□□□□ -2.36
NPHP3Q7Z494 RNU6-429P-201ENST00000384582 108 ntBASIC0.28□□□□□ -2.36
NPHP3Q7Z494 RNU7-2P-201ENST00000516096 62 ntBASIC0.28□□□□□ -2.36
NPHP3Q7Z494 RNU7-6P-201ENST00000516845 62 ntBASIC0.28□□□□□ -2.36
NPHP3Q7Z494 SCARNA16.5-201ENST00000517114 183 ntBASIC0.28□□□□□ -2.36
NPHP3Q7Z494 MIR6828-201ENST00000636181 60 ntBASIC0.28□□□□□ -2.36
NPHP3Q7Z494 Y_RNA.56-201ENST00000362798 112 ntBASIC0.27□□□□□ -2.37
NPHP3Q7Z494 MIR1263-201ENST00000408324 86 ntBASIC0.27□□□□□ -2.37
NPHP3Q7Z494 RNA5SP227-201ENST00000516184 113 ntBASIC0.27□□□□□ -2.37
NPHP3Q7Z494 RNU6-135P-201ENST00000516769 101 ntBASIC0.27□□□□□ -2.37
NPHP3Q7Z494 MIR4639-201ENST00000584938 69 ntBASIC0.27□□□□□ -2.37
NPHP3Q7Z494 AC087741.2-201ENST00000619415 172 ntBASIC0.27□□□□□ -2.37
NPHP3Q7Z494 MIR1912-201ENST00000410389 80 ntBASIC0.26□□□□□ -2.37
NPHP3Q7Z494 Y_RNA.773-201ENST00000607168 90 ntBASIC0.26□□□□□ -2.37
NPHP3Q7Z494 Y_RNA.98-201ENST00000363109 102 ntBASIC0.25□□□□□ -2.37
NPHP3Q7Z494 Y_RNA.170-201ENST00000363746 110 ntBASIC0.25□□□□□ -2.37
NPHP3Q7Z494 Y_RNA.328-201ENST00000365208 113 ntBASIC0.25□□□□□ -2.37
NPHP3Q7Z494 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
NPHP3Q7Z494 BX276092.1-201ENST00000427368 251 ntBASIC0.25□□□□□ -2.37
NPHP3Q7Z494 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
NPHP3Q7Z494 RNU6-426P-201ENST00000516464 97 ntBASIC0.25□□□□□ -2.37
NPHP3Q7Z494 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
NPHP3Q7Z494 TUG1_4.1-201ENST00000619464 181 ntBASIC0.25□□□□□ -2.37
NPHP3Q7Z494 AC091304.10-201ENST00000641554 121 ntBASIC0.25□□□□□ -2.37
NPHP3Q7Z494 SNORD115-24-201ENST00000363528 82 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 RNU6-647P-201ENST00000364243 107 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 SNORD115-35-201ENST00000365122 82 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 RNU6-815P-201ENST00000384080 113 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 RNU6-187P-201ENST00000384139 106 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 Y_RNA.488-201ENST00000384403 102 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 Y_RNA.555-201ENST00000384673 110 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 RNU2-59P-201ENST00000410482 191 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 RNU6-735P-201ENST00000410612 107 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 AC108059.2-201ENST00000434626 151 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 MIR4636-201ENST00000582271 80 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 MIR376B-201ENST00000614515 100 ntBASIC0.24□□□□□ -2.37
NPHP3Q7Z494 RNU6-865P-201ENST00000364772 107 ntBASIC0.23□□□□□ -2.37
NPHP3Q7Z494 AL158147.1-201ENST00000443970 75 ntBASIC0.23□□□□□ -2.37
NPHP3Q7Z494 AC244505.6-201ENST00000452829 130 ntBASIC0.23□□□□□ -2.37
NPHP3Q7Z494 TRAJ51-201ENST00000504127 63 ntBASIC0.23□□□□□ -2.37
NPHP3Q7Z494 RNU6-781P-201ENST00000516377 101 ntBASIC0.23□□□□□ -2.37
NPHP3Q7Z494 MIR548H5-201ENST00000580314 60 ntBASIC0.23□□□□□ -2.37
NPHP3Q7Z494 MIR6755-201ENST00000619993 66 ntBASIC0.23□□□□□ -2.37
NPHP3Q7Z494 AP001362.1-201ENST00000625165 124 ntBASIC0.23□□□□□ -2.37
NPHP3Q7Z494 Y_RNA.127-201ENST00000363386 109 ntBASIC0.22□□□□□ -2.37
NPHP3Q7Z494 Y_RNA.423-201ENST00000384057 113 ntBASIC0.22□□□□□ -2.37
NPHP3Q7Z494 AC073261.1-201ENST00000429409 121 ntBASIC0.22□□□□□ -2.37
NPHP3Q7Z494 RNU6-863P-201ENST00000515989 104 ntBASIC0.22□□□□□ -2.37
NPHP3Q7Z494 AC138869.1-201ENST00000568623 124 ntBASIC0.22□□□□□ -2.37
NPHP3Q7Z494 U7.2-201ENST00000607576 63 ntBASIC0.22□□□□□ -2.37
NPHP3Q7Z494 RNU6-235P-201ENST00000362644 107 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 Y_RNA.180-201ENST00000363867 113 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 MIR635-201ENST00000384830 98 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 MIR34C-201ENST00000384831 77 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 RNU7-200P-201ENST00000516105 62 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 RNU6-346P-201ENST00000516288 111 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 RNU7-161P-201ENST00000517289 62 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 MIR4752-201ENST00000579672 72 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 MIR3671-201ENST00000580455 88 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 MIR3163-201ENST00000581592 73 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 MIR1255B1-201ENST00000636325 63 ntBASIC0.21□□□□□ -2.38
NPHP3Q7Z494 Y_RNA.198-201ENST00000364013 98 ntBASIC0.2□□□□□ -2.38
NPHP3Q7Z494 RNU6-521P-201ENST00000516663 105 ntBASIC0.2□□□□□ -2.38
NPHP3Q7Z494 RNU6-255P-201ENST00000516957 105 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 251 ms