Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 Y_RNA.56-201ENST00000362798 112 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 Y_RNA.247-201ENST00000364500 92 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 Y_RNA.281-201ENST00000364774 94 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 U8.6-201ENST00000364939 135 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 RNU4-45P-201ENST00000365469 141 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 MIR644A-201ENST00000385262 94 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 TRMT112P2-201ENST00000512910 132 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 AC068339.1-201ENST00000526965 141 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 MIR3678-201ENST00000578455 94 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 MIR4769-201ENST00000584126 77 ntBASIC0.64□□□□□ -2.31
SHFQ7M4L6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.63□□□□□ -2.31
SHFQ7M4L6 RNU6-1201P-201ENST00000384227 107 ntBASIC0.63□□□□□ -2.31
SHFQ7M4L6 MIR4498-201ENST00000577599 66 ntBASIC0.63□□□□□ -2.31
SHFQ7M4L6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.63□□□□□ -2.31
SHFQ7M4L6 U2.22-201ENST00000636441 106 ntBASIC0.63□□□□□ -2.31
SHFQ7M4L6 RNU6-834P-201ENST00000362367 110 ntBASIC0.62□□□□□ -2.31
SHFQ7M4L6 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
SHFQ7M4L6 SNRPGP12-201ENST00000449481 213 ntBASIC0.62□□□□□ -2.31
SHFQ7M4L6 MIR5009-201ENST00000578736 100 ntBASIC0.62□□□□□ -2.31
SHFQ7M4L6 MIR548H5-201ENST00000580314 60 ntBASIC0.62□□□□□ -2.31
SHFQ7M4L6 MIR6129-201ENST00000616087 109 ntBASIC0.62□□□□□ -2.31
SHFQ7M4L6 SNORD38.1-201ENST00000363863 68 ntBASIC0.61□□□□□ -2.31
SHFQ7M4L6 SNORD38.2-201ENST00000384470 69 ntBASIC0.61□□□□□ -2.31
SHFQ7M4L6 MIR577-201ENST00000385196 96 ntBASIC0.61□□□□□ -2.31
SHFQ7M4L6 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
SHFQ7M4L6 TRAJ51-201ENST00000504127 63 ntBASIC0.61□□□□□ -2.31
SHFQ7M4L6 AL442128.1-201ENST00000615151 90 ntBASIC0.61□□□□□ -2.31
SHFQ7M4L6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.61□□□□□ -2.31
SHFQ7M4L6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SHFQ7M4L6 Y_RNA.49-201ENST00000362714 112 ntBASIC0.6□□□□□ -2.31
SHFQ7M4L6 SNORD18A-201ENST00000363753 72 ntBASIC0.6□□□□□ -2.31
SHFQ7M4L6 RNU6-1056P-201ENST00000383996 107 ntBASIC0.6□□□□□ -2.31
SHFQ7M4L6 RNU6-571P-201ENST00000384128 107 ntBASIC0.6□□□□□ -2.31
SHFQ7M4L6 MIR548I2-201ENST00000408348 149 ntBASIC0.6□□□□□ -2.31
SHFQ7M4L6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.6□□□□□ -2.31
SHFQ7M4L6 RNU6-469P-201ENST00000516253 101 ntBASIC0.6□□□□□ -2.31
SHFQ7M4L6 RNA5SP94-201ENST00000516917 108 ntBASIC0.6□□□□□ -2.31
SHFQ7M4L6 MIR4694-201ENST00000578534 80 ntBASIC0.6□□□□□ -2.31
SHFQ7M4L6 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
SHFQ7M4L6 MIR6767-201ENST00000637302 66 ntBASIC0.6□□□□□ -2.31
SHFQ7M4L6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
SHFQ7M4L6 MIR373-201ENST00000362273 69 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 RNY1P10-201ENST00000363268 113 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 RNU6-1107P-201ENST00000364817 104 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 Y_RNA.323-201ENST00000365157 109 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 Y_RNA.377-201ENST00000365644 108 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 RNU6-1081P-201ENST00000384537 107 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 MIR635-201ENST00000384830 98 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 RNU6-321P-201ENST00000410912 106 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.59□□□□□ -2.31
SHFQ7M4L6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.59□□□□□ -2.31
SHFQ7M4L6 RNU6-412P-201ENST00000516434 106 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 RNU6-850P-201ENST00000516934 103 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 AC138907.6-201ENST00000568401 126 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 AC138869.1-201ENST00000568623 124 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 MIR4298-201ENST00000584380 73 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 RNU7-10P-201ENST00000607194 63 ntBASIC0.59□□□□□ -2.31
SHFQ7M4L6 RNA5SP432-201ENST00000362480 116 ntBASIC0.58□□□□□ -2.32
SHFQ7M4L6 RNU6-170P-201ENST00000362832 104 ntBASIC0.58□□□□□ -2.32
SHFQ7M4L6 Y_RNA.273-201ENST00000364703 102 ntBASIC0.58□□□□□ -2.32
SHFQ7M4L6 MIR548G-201ENST00000408442 89 ntBASIC0.58□□□□□ -2.32
SHFQ7M4L6 AC244505.6-201ENST00000452829 130 ntBASIC0.58□□□□□ -2.32
SHFQ7M4L6 RNU6-135P-201ENST00000516769 101 ntBASIC0.58□□□□□ -2.32
SHFQ7M4L6 MTND5P40-201ENST00000559945 246 ntBASIC0.58□□□□□ -2.32
SHFQ7M4L6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.58□□□□□ -2.32
SHFQ7M4L6 RNY3P2-201ENST00000362918 102 ntBASIC0.57□□□□□ -2.32
SHFQ7M4L6 RNU6-832P-201ENST00000363319 107 ntBASIC0.57□□□□□ -2.32
SHFQ7M4L6 RNU6-1014P-201ENST00000383940 103 ntBASIC0.57□□□□□ -2.32
SHFQ7M4L6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.57□□□□□ -2.32
SHFQ7M4L6 SNORD63B-201ENST00000411005 70 ntBASIC0.57□□□□□ -2.32
SHFQ7M4L6 SPINT5P-201ENST00000448174 155 ntBASIC0.57□□□□□ -2.32
SHFQ7M4L6 RNU6-589P-201ENST00000516485 107 ntBASIC0.57□□□□□ -2.32
SHFQ7M4L6 MIR3613-201ENST00000579844 87 ntBASIC0.57□□□□□ -2.32
SHFQ7M4L6 SNORA36.1-201ENST00000363424 132 ntBASIC0.56□□□□□ -2.32
SHFQ7M4L6 RNU6-1099P-201ENST00000363533 107 ntBASIC0.56□□□□□ -2.32
SHFQ7M4L6 RNA5SP517-201ENST00000364724 117 ntBASIC0.56□□□□□ -2.32
SHFQ7M4L6 SNORD28-201ENST00000384706 75 ntBASIC0.56□□□□□ -2.32
SHFQ7M4L6 RNU6-90P-201ENST00000606352 106 ntBASIC0.56□□□□□ -2.32
SHFQ7M4L6 RNU6-1290P-201ENST00000362957 109 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 Y_RNA.173-201ENST00000363776 113 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 Y_RNA.342-201ENST00000365352 113 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 MIR508-201ENST00000384857 115 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 MIR519A1-201ENST00000385257 85 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 Y_RNA.629-201ENST00000411368 105 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 AC097635.1-201ENST00000450678 155 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 RNU7-106P-201ENST00000459514 67 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 RNU6-237P-201ENST00000515985 71 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 RNA5SP47-201ENST00000517230 109 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 MIR4639-201ENST00000584938 69 ntBASIC0.55□□□□□ -2.32
SHFQ7M4L6 RNU6-1229P-201ENST00000364295 107 ntBASIC0.54□□□□□ -2.32
SHFQ7M4L6 MIR599-201ENST00000385069 95 ntBASIC0.54□□□□□ -2.32
SHFQ7M4L6 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
SHFQ7M4L6 RNU7-195P-201ENST00000458793 62 ntBASIC0.54□□□□□ -2.32
SHFQ7M4L6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.54□□□□□ -2.32
SHFQ7M4L6 RNA5SP102-201ENST00000516865 106 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 248.2 ms