Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC108210.2-201ENST00000503681 201 ntBASIC1.66□□□□□ -2.14
RNF111Q6ZNA4 AC084768.2-201ENST00000622736 221 ntBASIC1.66□□□□□ -2.14
RNF111Q6ZNA4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RNF111Q6ZNA4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
RNF111Q6ZNA4 RNU4-32P-201ENST00000363404 141 ntBASIC1.65□□□□□ -2.15
RNF111Q6ZNA4 SNORD113.3-201ENST00000364630 78 ntBASIC1.65□□□□□ -2.15
RNF111Q6ZNA4 RNU6-652P-201ENST00000365488 107 ntBASIC1.65□□□□□ -2.15
RNF111Q6ZNA4 MIR1257-201ENST00000408490 117 ntBASIC1.65□□□□□ -2.15
RNF111Q6ZNA4 SNORD4B-201ENST00000459083 72 ntBASIC1.65□□□□□ -2.15
RNF111Q6ZNA4 AC008834.1-201ENST00000511612 175 ntBASIC1.65□□□□□ -2.15
RNF111Q6ZNA4 AC036111.3-201ENST00000526389 112 ntBASIC1.65□□□□□ -2.15
RNF111Q6ZNA4 AL512598.1-201ENST00000610158 273 ntBASIC1.65□□□□□ -2.15
RNF111Q6ZNA4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 RNU6-934P-201ENST00000365154 107 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 RNU7-85P-201ENST00000458851 63 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 snoU13.11-201ENST00000459219 104 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 RNA5SP395-201ENST00000516567 118 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 AC015712.3-201ENST00000559380 164 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 AC023827.1-201ENST00000569247 97 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 MIR4771-2-201ENST00000577758 74 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 MIR4771-1-201ENST00000582617 74 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 AC013244.2-201ENST00000603396 103 ntBASIC1.64□□□□□ -2.15
RNF111Q6ZNA4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.63□□□□□ -2.15
RNF111Q6ZNA4 MIR764-201ENST00000390811 85 ntBASIC1.63□□□□□ -2.15
RNF111Q6ZNA4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.63□□□□□ -2.15
RNF111Q6ZNA4 Y_RNA.648-201ENST00000459455 110 ntBASIC1.63□□□□□ -2.15
RNF111Q6ZNA4 RNU7-106P-201ENST00000459514 67 ntBASIC1.63□□□□□ -2.15
RNF111Q6ZNA4 AC093729.1-201ENST00000513074 128 ntBASIC1.63□□□□□ -2.15
RNF111Q6ZNA4 RNU7-153P-201ENST00000516455 62 ntBASIC1.63□□□□□ -2.15
RNF111Q6ZNA4 RNU6-548P-201ENST00000517083 115 ntBASIC1.63□□□□□ -2.15
RNF111Q6ZNA4 MIR4422-201ENST00000581938 83 ntBASIC1.63□□□□□ -2.15
RNF111Q6ZNA4 MIR101-2-201ENST00000362195 79 ntBASIC1.62□□□□□ -2.15
RNF111Q6ZNA4 SNORD36A-201ENST00000362874 73 ntBASIC1.62□□□□□ -2.15
RNF111Q6ZNA4 SNORD115-37-201ENST00000363768 82 ntBASIC1.62□□□□□ -2.15
RNF111Q6ZNA4 RNU6-243P-201ENST00000391140 107 ntBASIC1.62□□□□□ -2.15
RNF111Q6ZNA4 RNU6-1254P-201ENST00000391266 104 ntBASIC1.62□□□□□ -2.15
RNF111Q6ZNA4 SNORD100-201ENST00000408573 76 ntBASIC1.62□□□□□ -2.15
RNF111Q6ZNA4 SNORD63B-201ENST00000411005 70 ntBASIC1.62□□□□□ -2.15
RNF111Q6ZNA4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.62□□□□□ -2.15
RNF111Q6ZNA4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.62□□□□□ -2.15
RNF111Q6ZNA4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
RNF111Q6ZNA4 RNU6-482P-201ENST00000391068 107 ntBASIC1.61□□□□□ -2.15
RNF111Q6ZNA4 RNU6-902P-201ENST00000517212 91 ntBASIC1.61□□□□□ -2.15
RNF111Q6ZNA4 MIR6082-201ENST00000613604 109 ntBASIC1.61□□□□□ -2.15
RNF111Q6ZNA4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RNF111Q6ZNA4 Y_RNA.316-201ENST00000365118 111 ntBASIC1.6□□□□□ -2.15
RNF111Q6ZNA4 RNU6-910P-201ENST00000390844 107 ntBASIC1.6□□□□□ -2.15
RNF111Q6ZNA4 RNU6-279P-201ENST00000391297 101 ntBASIC1.6□□□□□ -2.15
RNF111Q6ZNA4 MIR1236-201ENST00000408340 102 ntBASIC1.6□□□□□ -2.15
RNF111Q6ZNA4 SNORA25.15-201ENST00000516487 89 ntBASIC1.6□□□□□ -2.15
RNF111Q6ZNA4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.6□□□□□ -2.15
RNF111Q6ZNA4 MIR8081-201ENST00000611533 95 ntBASIC1.6□□□□□ -2.15
RNF111Q6ZNA4 Y_RNA.244-201ENST00000364484 109 ntBASIC1.59□□□□□ -2.15
RNF111Q6ZNA4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RNF111Q6ZNA4 AL591704.2-201ENST00000421658 181 ntBASIC1.59□□□□□ -2.15
RNF111Q6ZNA4 RNU6-857P-201ENST00000515893 110 ntBASIC1.59□□□□□ -2.15
RNF111Q6ZNA4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.59□□□□□ -2.15
RNF111Q6ZNA4 RNU7-40P-201ENST00000516397 64 ntBASIC1.59□□□□□ -2.15
RNF111Q6ZNA4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.59□□□□□ -2.15
RNF111Q6ZNA4 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
RNF111Q6ZNA4 RNA5SP99-201ENST00000364020 114 ntBASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 MIR635-201ENST00000384830 98 ntBASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 MIR125B2-201ENST00000385128 89 ntBASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 SNORD111-201ENST00000408139 94 ntBASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 RNU7-21P-201ENST00000459430 62 ntBASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 TRAJ51-201ENST00000504127 63 ntBASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 RNU6-65P-201ENST00000516332 98 ntBASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 MIR4536-1-201ENST00000583537 88 ntBASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 AC106800.4-201ENST00000614905 153 ntBASIC1.58□□□□□ -2.16
RNF111Q6ZNA4 SNORA80D-201ENST00000384488 135 ntBASIC1.57□□□□□ -2.16
RNF111Q6ZNA4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.57□□□□□ -2.16
RNF111Q6ZNA4 RNU7-195P-201ENST00000458793 62 ntBASIC1.57□□□□□ -2.16
RNF111Q6ZNA4 RNU7-156P-201ENST00000517214 74 ntBASIC1.57□□□□□ -2.16
RNF111Q6ZNA4 AC140658.3-201ENST00000567603 271 ntBASIC1.57□□□□□ -2.16
RNF111Q6ZNA4 AL353997.5-201ENST00000618886 171 ntBASIC1.57□□□□□ -2.16
RNF111Q6ZNA4 Y_RNA.283-201ENST00000364798 112 ntBASIC1.56□□□□□ -2.16
RNF111Q6ZNA4 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
RNF111Q6ZNA4 RNU6-466P-201ENST00000391224 103 ntBASIC1.56□□□□□ -2.16
RNF111Q6ZNA4 RPS26P5-201ENST00000418544 335 ntBASIC1.56□□□□□ -2.16
RNF111Q6ZNA4 MIR548H5-201ENST00000580314 60 ntBASIC1.56□□□□□ -2.16
RNF111Q6ZNA4 MIR4676-201ENST00000583078 72 ntBASIC1.56□□□□□ -2.16
RNF111Q6ZNA4 RNU6-957P-201ENST00000363652 99 ntBASIC1.55□□□□□ -2.16
RNF111Q6ZNA4 RNU6-811P-201ENST00000384069 107 ntBASIC1.55□□□□□ -2.16
RNF111Q6ZNA4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.55□□□□□ -2.16
RNF111Q6ZNA4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.55□□□□□ -2.16
RNF111Q6ZNA4 RNU6-994P-201ENST00000410507 111 ntBASIC1.55□□□□□ -2.16
RNF111Q6ZNA4 SNORA25.13-201ENST00000516395 103 ntBASIC1.55□□□□□ -2.16
RNF111Q6ZNA4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.55□□□□□ -2.16
RNF111Q6ZNA4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
RNF111Q6ZNA4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
RNF111Q6ZNA4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RNF111Q6ZNA4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.54□□□□□ -2.16
RNF111Q6ZNA4 RNU6-24P-201ENST00000384440 107 ntBASIC1.54□□□□□ -2.16
RNF111Q6ZNA4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.54□□□□□ -2.16
RNF111Q6ZNA4 AC092628.1-201ENST00000436250 252 ntBASIC1.54□□□□□ -2.16
RNF111Q6ZNA4 SNORD79.1-201ENST00000516069 84 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms