Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 AL021368.2-201ENST00000606125 5352 ntBASIC3.58□□□□□ -1.84
SAMD1Q6SPF0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SAMD1Q6SPF0 SNORA6-201ENST00000384033 151 ntBASIC3.58□□□□□ -1.84
SAMD1Q6SPF0 SNORA54-201ENST00000384281 123 ntBASIC3.58□□□□□ -1.84
SAMD1Q6SPF0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.58□□□□□ -1.84
SAMD1Q6SPF0 AC055731.1-201ENST00000474387 401 ntBASIC3.58□□□□□ -1.84
SAMD1Q6SPF0 MIR4529-201ENST00000578110 78 ntBASIC3.58□□□□□ -1.84
SAMD1Q6SPF0 AL049779.4-201ENST00000604500 156 ntBASIC3.58□□□□□ -1.84
SAMD1Q6SPF0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SAMD1Q6SPF0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SAMD1Q6SPF0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SAMD1Q6SPF0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SAMD1Q6SPF0 RNU6-364P-201ENST00000384387 107 ntBASIC3.57□□□□□ -1.84
SAMD1Q6SPF0 MIR548C-201ENST00000384815 97 ntBASIC3.57□□□□□ -1.84
SAMD1Q6SPF0 MIR1261-201ENST00000408659 82 ntBASIC3.57□□□□□ -1.84
SAMD1Q6SPF0 RNU1-41P-201ENST00000516161 162 ntBASIC3.57□□□□□ -1.84
SAMD1Q6SPF0 RNU1-48P-201ENST00000516400 162 ntBASIC3.57□□□□□ -1.84
SAMD1Q6SPF0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.57□□□□□ -1.84
SAMD1Q6SPF0 Y_RNA.330-201ENST00000365230 109 ntBASIC3.56□□□□□ -1.84
SAMD1Q6SPF0 MIR630-201ENST00000384957 97 ntBASIC3.56□□□□□ -1.84
SAMD1Q6SPF0 SNORA31.25-201ENST00000517242 134 ntBASIC3.56□□□□□ -1.84
SAMD1Q6SPF0 AC245884.12-201ENST00000615364 59 ntBASIC3.56□□□□□ -1.84
SAMD1Q6SPF0 MIR548O2-201ENST00000616090 70 ntBASIC3.56□□□□□ -1.84
SAMD1Q6SPF0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.56□□□□□ -1.84
SAMD1Q6SPF0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.56□□□□□ -1.84
SAMD1Q6SPF0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SAMD1Q6SPF0 HMGN1P18-201ENST00000457642 277 ntBASIC3.55□□□□□ -1.84
SAMD1Q6SPF0 AC010297.1-201ENST00000623948 149 ntBASIC3.55□□□□□ -1.84
SAMD1Q6SPF0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.55□□□□□ -1.84
SAMD1Q6SPF0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SAMD1Q6SPF0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SAMD1Q6SPF0 SNORA2.1-201ENST00000363089 137 ntBASIC3.54□□□□□ -1.84
SAMD1Q6SPF0 SNORD113.3-201ENST00000364630 78 ntBASIC3.54□□□□□ -1.84
SAMD1Q6SPF0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
SAMD1Q6SPF0 SNORD42B-201ENST00000458893 67 ntBASIC3.53□□□□□ -1.84
SAMD1Q6SPF0 RNA5SP82-201ENST00000516707 92 ntBASIC3.53□□□□□ -1.84
SAMD1Q6SPF0 RNU6-902P-201ENST00000517212 91 ntBASIC3.53□□□□□ -1.84
SAMD1Q6SPF0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SAMD1Q6SPF0 AC067940.1-201ENST00000458411 300 ntBASIC3.52□□□□□ -1.85
SAMD1Q6SPF0 MIR6733-201ENST00000635723 61 ntBASIC3.52□□□□□ -1.85
SAMD1Q6SPF0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SAMD1Q6SPF0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SAMD1Q6SPF0 AC025033.1-201ENST00000463883 194 ntBASIC3.51□□□□□ -1.85
SAMD1Q6SPF0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.51□□□□□ -1.85
SAMD1Q6SPF0 RNA5SP356-201ENST00000515972 94 ntBASIC3.51□□□□□ -1.85
SAMD1Q6SPF0 MIR3162-201ENST00000581818 82 ntBASIC3.51□□□□□ -1.85
SAMD1Q6SPF0 MIR4676-201ENST00000583078 72 ntBASIC3.51□□□□□ -1.85
SAMD1Q6SPF0 MIR622-201ENST00000638396 96 ntBASIC3.51□□□□□ -1.85
SAMD1Q6SPF0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SAMD1Q6SPF0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SAMD1Q6SPF0 RNA5SP383-201ENST00000362934 120 ntBASIC3.5□□□□□ -1.85
SAMD1Q6SPF0 SNORD115-24-201ENST00000363528 82 ntBASIC3.5□□□□□ -1.85
SAMD1Q6SPF0 RNU6-990P-201ENST00000364385 104 ntBASIC3.5□□□□□ -1.85
SAMD1Q6SPF0 MIR617-201ENST00000385030 97 ntBASIC3.5□□□□□ -1.85
SAMD1Q6SPF0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.5□□□□□ -1.85
SAMD1Q6SPF0 RNU7-193P-201ENST00000516723 65 ntBASIC3.5□□□□□ -1.85
SAMD1Q6SPF0 MIR3664-201ENST00000579074 99 ntBASIC3.5□□□□□ -1.85
SAMD1Q6SPF0 MIR4435-1-201ENST00000582552 80 ntBASIC3.5□□□□□ -1.85
SAMD1Q6SPF0 AL359851.1-201ENST00000569460 4997 ntBASIC3.49□□□□□ -1.85
SAMD1Q6SPF0 SNORA3A-201ENST00000364113 130 ntBASIC3.49□□□□□ -1.85
SAMD1Q6SPF0 RNU6V-201ENST00000384105 107 ntBASIC3.49□□□□□ -1.85
SAMD1Q6SPF0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.49□□□□□ -1.85
SAMD1Q6SPF0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.48□□□□□ -1.85
SAMD1Q6SPF0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.48□□□□□ -1.85
SAMD1Q6SPF0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SAMD1Q6SPF0 RNU7-102P-201ENST00000458948 62 ntBASIC3.48□□□□□ -1.85
SAMD1Q6SPF0 MIR6739-201ENST00000622461 75 ntBASIC3.48□□□□□ -1.85
SAMD1Q6SPF0 AC027335.2-201ENST00000624030 375 ntBASIC3.48□□□□□ -1.85
SAMD1Q6SPF0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 RNA5SP276-201ENST00000362580 94 ntBASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 RPS26P5-201ENST00000418544 335 ntBASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 RNU6-237P-201ENST00000515985 71 ntBASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 RNU7-40P-201ENST00000516397 64 ntBASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 SNORA40.17-201ENST00000517256 115 ntBASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 AC036111.3-201ENST00000526389 112 ntBASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 SNORA77B-201ENST00000578179 125 ntBASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 uc_338.10-201ENST00000621872 182 ntBASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SAMD1Q6SPF0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SAMD1Q6SPF0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.46□□□□□ -1.86
SAMD1Q6SPF0 RNA5SP403-201ENST00000363598 108 ntBASIC3.46□□□□□ -1.86
SAMD1Q6SPF0 SNORA67.3-201ENST00000384366 140 ntBASIC3.46□□□□□ -1.86
SAMD1Q6SPF0 MIR519E-201ENST00000385075 84 ntBASIC3.46□□□□□ -1.86
SAMD1Q6SPF0 MIR938-201ENST00000401216 83 ntBASIC3.46□□□□□ -1.86
SAMD1Q6SPF0 AL157398.1-201ENST00000452981 186 ntBASIC3.46□□□□□ -1.86
SAMD1Q6SPF0 MIR8063-201ENST00000621930 81 ntBASIC3.46□□□□□ -1.86
SAMD1Q6SPF0 RNU6-520P-201ENST00000384717 104 ntBASIC3.45□□□□□ -1.86
SAMD1Q6SPF0 RNU7-104P-201ENST00000459398 79 ntBASIC3.45□□□□□ -1.86
SAMD1Q6SPF0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SAMD1Q6SPF0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SAMD1Q6SPF0 RNA5SP217-201ENST00000515959 91 ntBASIC3.44□□□□□ -1.86
SAMD1Q6SPF0 RNU1-143P-201ENST00000516296 146 ntBASIC3.44□□□□□ -1.86
SAMD1Q6SPF0 RNU7-161P-201ENST00000517289 62 ntBASIC3.44□□□□□ -1.86
SAMD1Q6SPF0 U1.23-201ENST00000610293 146 ntBASIC3.44□□□□□ -1.86
SAMD1Q6SPF0 RNU1-68P-201ENST00000615382 146 ntBASIC3.44□□□□□ -1.86
SAMD1Q6SPF0 U1.39-201ENST00000621562 146 ntBASIC3.44□□□□□ -1.86
SAMD1Q6SPF0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SAMD1Q6SPF0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 231.4 ms