Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RN7SL853P-201ENST00000617250 223 ntBASIC2.22□□□□□ -2.05
RNF20Q5VTR2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
RNF20Q5VTR2 MIRLET7F1-201ENST00000362202 87 ntBASIC2.21□□□□□ -2.06
RNF20Q5VTR2 SNORA16.1-201ENST00000364597 132 ntBASIC2.21□□□□□ -2.06
RNF20Q5VTR2 MIR635-201ENST00000384830 98 ntBASIC2.21□□□□□ -2.06
RNF20Q5VTR2 MIR676-201ENST00000390702 67 ntBASIC2.21□□□□□ -2.06
RNF20Q5VTR2 MIR1257-201ENST00000408490 117 ntBASIC2.21□□□□□ -2.06
RNF20Q5VTR2 TRAJ51-201ENST00000504127 63 ntBASIC2.21□□□□□ -2.06
RNF20Q5VTR2 MIR3064-201ENST00000581130 66 ntBASIC2.21□□□□□ -2.06
RNF20Q5VTR2 AC104996.3-201ENST00000590718 94 ntBASIC2.21□□□□□ -2.06
RNF20Q5VTR2 AL627230.6-201ENST00000611129 280 ntBASIC2.21□□□□□ -2.06
RNF20Q5VTR2 Y_RNA.13-201ENST00000362403 112 ntBASIC2.2□□□□□ -2.06
RNF20Q5VTR2 Y_RNA.536-201ENST00000384621 113 ntBASIC2.2□□□□□ -2.06
RNF20Q5VTR2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.2□□□□□ -2.06
RNF20Q5VTR2 RNU7-195P-201ENST00000458793 62 ntBASIC2.2□□□□□ -2.06
RNF20Q5VTR2 RNA5SP182-201ENST00000516064 82 ntBASIC2.2□□□□□ -2.06
RNF20Q5VTR2 MIR3945-201ENST00000581853 98 ntBASIC2.2□□□□□ -2.06
RNF20Q5VTR2 AC048334.1-201ENST00000477975 159 ntBASIC2.19□□□□□ -2.06
RNF20Q5VTR2 RNU6-1194P-201ENST00000516208 104 ntBASIC2.19□□□□□ -2.06
RNF20Q5VTR2 SNORD92-201ENST00000585078 85 ntBASIC2.19□□□□□ -2.06
RNF20Q5VTR2 Y_RNA.788-201ENST00000622394 112 ntBASIC2.19□□□□□ -2.06
RNF20Q5VTR2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.19□□□□□ -2.06
RNF20Q5VTR2 SNORD33-201ENST00000362761 85 ntBASIC2.18□□□□□ -2.06
RNF20Q5VTR2 RNU6-686P-201ENST00000364839 107 ntBASIC2.18□□□□□ -2.06
RNF20Q5VTR2 Y_RNA.491-201ENST00000384417 107 ntBASIC2.18□□□□□ -2.06
RNF20Q5VTR2 AL512310.8-201ENST00000550183 120 ntBASIC2.18□□□□□ -2.06
RNF20Q5VTR2 MIR3122-201ENST00000577243 73 ntBASIC2.18□□□□□ -2.06
RNF20Q5VTR2 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.18□□□□□ -2.06
RNF20Q5VTR2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.18□□□□□ -2.06
RNF20Q5VTR2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RNF20Q5VTR2 MIRLET7A1-201ENST00000362295 80 ntBASIC2.17□□□□□ -2.06
RNF20Q5VTR2 RNU6-934P-201ENST00000365154 107 ntBASIC2.17□□□□□ -2.06
RNF20Q5VTR2 MIR548U-201ENST00000390728 81 ntBASIC2.17□□□□□ -2.06
RNF20Q5VTR2 SNORA11.2-201ENST00000408318 127 ntBASIC2.17□□□□□ -2.06
RNF20Q5VTR2 AC139453.2-201ENST00000487255 133 ntBASIC2.17□□□□□ -2.06
RNF20Q5VTR2 RNU6-557P-201ENST00000516842 110 ntBASIC2.17□□□□□ -2.06
RNF20Q5VTR2 AL096840.1-201ENST00000603287 93 ntBASIC2.17□□□□□ -2.06
RNF20Q5VTR2 MIR6082-201ENST00000613604 109 ntBASIC2.17□□□□□ -2.06
RNF20Q5VTR2 SNORD114-1-201ENST00000362705 72 ntBASIC2.16□□□□□ -2.06
RNF20Q5VTR2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RNF20Q5VTR2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RNF20Q5VTR2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.16□□□□□ -2.06
RNF20Q5VTR2 MIR4419B-201ENST00000577260 68 ntBASIC2.16□□□□□ -2.06
RNF20Q5VTR2 MIR4771-2-201ENST00000577758 74 ntBASIC2.16□□□□□ -2.06
RNF20Q5VTR2 MIR548H5-201ENST00000580314 60 ntBASIC2.16□□□□□ -2.06
RNF20Q5VTR2 MIR4771-1-201ENST00000582617 74 ntBASIC2.16□□□□□ -2.06
RNF20Q5VTR2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.16□□□□□ -2.06
RNF20Q5VTR2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNF20Q5VTR2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RNF20Q5VTR2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RNF20Q5VTR2 SNORD113.3-201ENST00000364630 78 ntBASIC2.15□□□□□ -2.07
RNF20Q5VTR2 SNORD90-201ENST00000391145 111 ntBASIC2.15□□□□□ -2.07
RNF20Q5VTR2 SNORA25.9-201ENST00000365087 128 ntBASIC2.14□□□□□ -2.07
RNF20Q5VTR2 RNU6-380P-201ENST00000410207 107 ntBASIC2.14□□□□□ -2.07
RNF20Q5VTR2 SCARNA18B-201ENST00000458806 135 ntBASIC2.14□□□□□ -2.07
RNF20Q5VTR2 Y_RNA.809-201ENST00000516058 95 ntBASIC2.14□□□□□ -2.07
RNF20Q5VTR2 AC036111.3-201ENST00000526389 112 ntBASIC2.14□□□□□ -2.07
RNF20Q5VTR2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
RNF20Q5VTR2 MIR518E-201ENST00000385252 88 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 SNORA75.2-201ENST00000391138 150 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 SNORA75.3-201ENST00000391231 150 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 AL606490.4-201ENST00000423117 127 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 AC092628.1-201ENST00000436250 252 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 FGF7P7-201ENST00000514120 227 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 RN7SKP88-201ENST00000516847 250 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 AC023827.1-201ENST00000569247 97 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 RNU7-10P-201ENST00000607194 63 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 7SK.8-201ENST00000612110 250 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 7SK.11-201ENST00000615477 250 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 7SK.13-201ENST00000622040 250 ntBASIC2.13□□□□□ -2.07
RNF20Q5VTR2 Y_RNA.56-201ENST00000362798 112 ntBASIC2.12□□□□□ -2.07
RNF20Q5VTR2 Y_RNA.545-201ENST00000384652 105 ntBASIC2.12□□□□□ -2.07
RNF20Q5VTR2 MIR583-201ENST00000384846 75 ntBASIC2.12□□□□□ -2.07
RNF20Q5VTR2 AC003989.2-201ENST00000440224 169 ntBASIC2.12□□□□□ -2.07
RNF20Q5VTR2 SNORA31.2-201ENST00000516019 134 ntBASIC2.12□□□□□ -2.07
RNF20Q5VTR2 Y_RNA.697-201ENST00000516776 113 ntBASIC2.12□□□□□ -2.07
RNF20Q5VTR2 MIR4484-201ENST00000582855 83 ntBASIC2.12□□□□□ -2.07
RNF20Q5VTR2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RNF20Q5VTR2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RNF20Q5VTR2 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
RNF20Q5VTR2 SNORD77.2-201ENST00000391045 68 ntBASIC2.11□□□□□ -2.07
RNF20Q5VTR2 RNU6-1054P-201ENST00000411293 104 ntBASIC2.11□□□□□ -2.07
RNF20Q5VTR2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.11□□□□□ -2.07
RNF20Q5VTR2 AC004223.1-201ENST00000479840 271 ntBASIC2.11□□□□□ -2.07
RNF20Q5VTR2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.11□□□□□ -2.07
RNF20Q5VTR2 TRDV1-202ENST00000621643 102 ntBASIC2.11□□□□□ -2.07
RNF20Q5VTR2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RNF20Q5VTR2 MIR125B2-201ENST00000385128 89 ntBASIC2.1□□□□□ -2.07
RNF20Q5VTR2 MIR934-201ENST00000401241 83 ntBASIC2.1□□□□□ -2.07
RNF20Q5VTR2 RPS27P16-201ENST00000425758 201 ntBASIC2.1□□□□□ -2.07
RNF20Q5VTR2 Y_RNA.660-201ENST00000516002 120 ntBASIC2.1□□□□□ -2.07
RNF20Q5VTR2 RNU7-156P-201ENST00000517214 74 ntBASIC2.1□□□□□ -2.07
RNF20Q5VTR2 MIR3198-2-201ENST00000577868 80 ntBASIC2.1□□□□□ -2.07
RNF20Q5VTR2 MIR3134-201ENST00000579433 74 ntBASIC2.1□□□□□ -2.07
RNF20Q5VTR2 Y_RNA.363-201ENST00000365529 113 ntBASIC2.09□□□□□ -2.07
RNF20Q5VTR2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RNF20Q5VTR2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.08□□□□□ -2.08
RNF20Q5VTR2 RNU6-208P-201ENST00000362431 107 ntBASIC2.08□□□□□ -2.08
RNF20Q5VTR2 SNORA40.18-201ENST00000391200 128 ntBASIC2.08□□□□□ -2.08
RNF20Q5VTR2 RNU1-78P-201ENST00000391248 165 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 237.8 ms