Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 RNU4-58P-201ENST00000363192 141 ntBASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 Y_RNA.386-201ENST00000383913 105 ntBASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 RNU6-243P-201ENST00000391140 107 ntBASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 RNU6-1254P-201ENST00000391266 104 ntBASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 RNU6-531P-201ENST00000516694 104 ntBASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 AC121758.2-201ENST00000553271 193 ntBASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 MIR5694-201ENST00000581190 76 ntBASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 ZNF355P-201ENST00000427301 3216 ntBASIC2.49□□□□□ -2.01
PRPF38BQ5VTL8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 MIR377-201ENST00000362145 69 ntBASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 RNU6-403P-201ENST00000363163 104 ntBASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 Y_RNA.491-201ENST00000384417 107 ntBASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 AC079140.2-201ENST00000506193 142 ntBASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 Y_RNA.681-201ENST00000516445 113 ntBASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 RNU6-807P-201ENST00000516805 107 ntBASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 MIR4491-201ENST00000581087 68 ntBASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 MIR1297-201ENST00000637311 77 ntBASIC2.48□□□□□ -2.01
PRPF38BQ5VTL8 RNA5SP190-201ENST00000365222 118 ntBASIC2.47□□□□□ -2.01
PRPF38BQ5VTL8 SNORD90-201ENST00000391145 111 ntBASIC2.47□□□□□ -2.01
PRPF38BQ5VTL8 RNA5SP182-201ENST00000516064 82 ntBASIC2.47□□□□□ -2.01
PRPF38BQ5VTL8 SNORA25.16-201ENST00000516741 121 ntBASIC2.47□□□□□ -2.01
PRPF38BQ5VTL8 MIR3937-201ENST00000580135 106 ntBASIC2.47□□□□□ -2.01
PRPF38BQ5VTL8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PRPF38BQ5VTL8 RNU6-208P-201ENST00000362431 107 ntBASIC2.46□□□□□ -2.02
PRPF38BQ5VTL8 MIR17-201ENST00000385012 84 ntBASIC2.46□□□□□ -2.02
PRPF38BQ5VTL8 AC074348.1-201ENST00000426503 132 ntBASIC2.46□□□□□ -2.02
PRPF38BQ5VTL8 RNU7-106P-201ENST00000459514 67 ntBASIC2.46□□□□□ -2.02
PRPF38BQ5VTL8 AP003716.2-201ENST00000528260 108 ntBASIC2.46□□□□□ -2.02
PRPF38BQ5VTL8 MIR6840-201ENST00000611937 71 ntBASIC2.46□□□□□ -2.02
PRPF38BQ5VTL8 PVT1_3.1-201ENST00000620853 95 ntBASIC2.46□□□□□ -2.02
PRPF38BQ5VTL8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 MIRLET7F1-201ENST00000362202 87 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 RNU5F-1-201ENST00000362507 117 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 Y_RNA.205-201ENST00000364128 113 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 Y_RNA.264-201ENST00000364665 102 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 RNU6-392P-201ENST00000364926 101 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 RNU6-1065P-201ENST00000384513 106 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 MIR18B-201ENST00000454574 71 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 SNORD13-201ENST00000459299 104 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 RNA5SP61-201ENST00000516453 100 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 SNORA44.1-201ENST00000517031 108 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 SNORD92-201ENST00000585078 85 ntBASIC2.45□□□□□ -2.02
PRPF38BQ5VTL8 AL359851.1-201ENST00000569460 4997 ntBASIC2.44□□□□□ -2.02
PRPF38BQ5VTL8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
PRPF38BQ5VTL8 MIR221-201ENST00000385135 110 ntBASIC2.44□□□□□ -2.02
PRPF38BQ5VTL8 MIR548U-201ENST00000390728 81 ntBASIC2.44□□□□□ -2.02
PRPF38BQ5VTL8 RNU6-587P-201ENST00000391282 106 ntBASIC2.44□□□□□ -2.02
PRPF38BQ5VTL8 AC015818.7-201ENST00000428754 109 ntBASIC2.44□□□□□ -2.02
PRPF38BQ5VTL8 RNU6-303P-201ENST00000517091 106 ntBASIC2.44□□□□□ -2.02
PRPF38BQ5VTL8 MIR6515-201ENST00000619843 57 ntBASIC2.44□□□□□ -2.02
PRPF38BQ5VTL8 MIR101-2-201ENST00000362195 79 ntBASIC2.43□□□□□ -2.02
PRPF38BQ5VTL8 SNORD1A-201ENST00000364968 72 ntBASIC2.43□□□□□ -2.02
PRPF38BQ5VTL8 RNU1-36P-201ENST00000365130 165 ntBASIC2.43□□□□□ -2.02
PRPF38BQ5VTL8 MIR30A-201ENST00000385092 71 ntBASIC2.43□□□□□ -2.02
PRPF38BQ5VTL8 RNA5SP210-201ENST00000391034 120 ntBASIC2.43□□□□□ -2.02
PRPF38BQ5VTL8 RNU6-466P-201ENST00000391224 103 ntBASIC2.43□□□□□ -2.02
PRPF38BQ5VTL8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRPF38BQ5VTL8 SNORD33-201ENST00000362761 85 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 RNU6-957P-201ENST00000363652 99 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 Y_RNA.327-201ENST00000365201 102 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 RNU6-649P-201ENST00000384463 107 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 RNU6-540P-201ENST00000384622 101 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 MIR3670-2-201ENST00000582974 65 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 MIR3670-1-201ENST00000584160 65 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 MIR3670-3-201ENST00000584855 65 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 MIR3670-4-201ENST00000612260 65 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 AC022709.1-201ENST00000615967 87 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 AC023934.1-201ENST00000574529 2389 ntBASIC2.42□□□□□ -2.02
PRPF38BQ5VTL8 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
PRPF38BQ5VTL8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PRPF38BQ5VTL8 Y_RNA.596-201ENST00000410462 109 ntBASIC2.41□□□□□ -2.02
PRPF38BQ5VTL8 MIR5092-201ENST00000583139 88 ntBASIC2.41□□□□□ -2.02
PRPF38BQ5VTL8 AC103810.8-201ENST00000607347 118 ntBASIC2.41□□□□□ -2.02
PRPF38BQ5VTL8 MIR6132-201ENST00000622083 109 ntBASIC2.41□□□□□ -2.02
PRPF38BQ5VTL8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
PRPF38BQ5VTL8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PRPF38BQ5VTL8 Y_RNA.12-201ENST00000362393 112 ntBASIC2.4□□□□□ -2.03
PRPF38BQ5VTL8 Y_RNA.330-201ENST00000365230 109 ntBASIC2.4□□□□□ -2.03
PRPF38BQ5VTL8 Y_RNA.588-201ENST00000391254 102 ntBASIC2.4□□□□□ -2.03
PRPF38BQ5VTL8 SNORD63B-201ENST00000411005 70 ntBASIC2.4□□□□□ -2.03
PRPF38BQ5VTL8 MIR3664-201ENST00000579074 99 ntBASIC2.4□□□□□ -2.03
PRPF38BQ5VTL8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.4□□□□□ -2.03
PRPF38BQ5VTL8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PRPF38BQ5VTL8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PRPF38BQ5VTL8 RNU6-580P-201ENST00000365159 107 ntBASIC2.39□□□□□ -2.03
PRPF38BQ5VTL8 MIR1257-201ENST00000408490 117 ntBASIC2.39□□□□□ -2.03
PRPF38BQ5VTL8 RNU2-59P-201ENST00000410482 191 ntBASIC2.39□□□□□ -2.03
PRPF38BQ5VTL8 snoU13.17-201ENST00000458802 104 ntBASIC2.39□□□□□ -2.03
PRPF38BQ5VTL8 RNA5SP233-201ENST00000459153 113 ntBASIC2.39□□□□□ -2.03
PRPF38BQ5VTL8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.39□□□□□ -2.03
PRPF38BQ5VTL8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
PRPF38BQ5VTL8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PRPF38BQ5VTL8 MIR302D-201ENST00000362275 68 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 224.5 ms