Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR9-2-201ENST00000384838 87 ntBASIC2.58□□□□□ -2
RC3H1Q5TC82 MT-TN-201ENST00000387400 73 ntBASIC2.58□□□□□ -2
RC3H1Q5TC82 RNU6-630P-201ENST00000391258 106 ntBASIC2.58□□□□□ -2
RC3H1Q5TC82 AC244636.1-201ENST00000421152 228 ntBASIC2.58□□□□□ -2
RC3H1Q5TC82 RPL30P7-201ENST00000479312 323 ntBASIC2.58□□□□□ -2
RC3H1Q5TC82 uc_338.6-201ENST00000613544 171 ntBASIC2.58□□□□□ -2
RC3H1Q5TC82 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.58□□□□□ -2
RC3H1Q5TC82 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
RC3H1Q5TC82 SNORA25.3-201ENST00000363205 127 ntBASIC2.57□□□□□ -2
RC3H1Q5TC82 Y_RNA.239-201ENST00000364444 113 ntBASIC2.57□□□□□ -2
RC3H1Q5TC82 RNU6-499P-201ENST00000365615 107 ntBASIC2.57□□□□□ -2
RC3H1Q5TC82 Y_RNA.588-201ENST00000391254 102 ntBASIC2.57□□□□□ -2
RC3H1Q5TC82 AC108667.1-201ENST00000428618 249 ntBASIC2.57□□□□□ -2
RC3H1Q5TC82 MIR2115-201ENST00000516657 100 ntBASIC2.57□□□□□ -2
RC3H1Q5TC82 MIR5002-201ENST00000584713 97 ntBASIC2.57□□□□□ -2
RC3H1Q5TC82 MIR6840-201ENST00000611937 71 ntBASIC2.57□□□□□ -2
RC3H1Q5TC82 RNU6-681P-201ENST00000364012 104 ntBASIC2.56□□□□□ -2
RC3H1Q5TC82 RNA5SP259-201ENST00000365541 109 ntBASIC2.56□□□□□ -2
RC3H1Q5TC82 SNORA17.3-201ENST00000391159 129 ntBASIC2.56□□□□□ -2
RC3H1Q5TC82 Y_RNA.606-201ENST00000410579 103 ntBASIC2.56□□□□□ -2
RC3H1Q5TC82 RPS27P16-201ENST00000425758 201 ntBASIC2.56□□□□□ -2
RC3H1Q5TC82 RNU7-195P-201ENST00000458793 62 ntBASIC2.56□□□□□ -2
RC3H1Q5TC82 TRAJ51-201ENST00000504127 63 ntBASIC2.56□□□□□ -2
RC3H1Q5TC82 RNU6-1053P-201ENST00000515930 101 ntBASIC2.56□□□□□ -2
RC3H1Q5TC82 MIR3675-201ENST00000583661 73 ntBASIC2.56□□□□□ -2
RC3H1Q5TC82 RNU6-895P-201ENST00000384125 103 ntBASIC2.55□□□□□ -2
RC3H1Q5TC82 SNORD100-201ENST00000408573 76 ntBASIC2.55□□□□□ -2
RC3H1Q5TC82 RN7SL274P-201ENST00000492268 272 ntBASIC2.55□□□□□ -2
RC3H1Q5TC82 RNU11-2P-201ENST00000516898 142 ntBASIC2.55□□□□□ -2
RC3H1Q5TC82 MIR4529-201ENST00000578110 78 ntBASIC2.55□□□□□ -2
RC3H1Q5TC82 ZNF209P-201ENST00000593450 2304 ntBASIC2.55□□□□□ -2
RC3H1Q5TC82 TRDV1-202ENST00000621643 102 ntBASIC2.55□□□□□ -2
RC3H1Q5TC82 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RC3H1Q5TC82 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RC3H1Q5TC82 Y_RNA.536-201ENST00000384621 113 ntBASIC2.54□□□□□ -2
RC3H1Q5TC82 MIR513A1-201ENST00000385138 129 ntBASIC2.54□□□□□ -2
RC3H1Q5TC82 MIR519A1-201ENST00000385257 85 ntBASIC2.54□□□□□ -2
RC3H1Q5TC82 SNORD93-201ENST00000408813 74 ntBASIC2.54□□□□□ -2
RC3H1Q5TC82 AL161935.2-201ENST00000414627 60 ntBASIC2.54□□□□□ -2
RC3H1Q5TC82 RNU7-193P-201ENST00000516723 65 ntBASIC2.54□□□□□ -2
RC3H1Q5TC82 RNU6-922P-201ENST00000516753 99 ntBASIC2.54□□□□□ -2
RC3H1Q5TC82 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.54□□□□□ -2
RC3H1Q5TC82 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.54□□□□□ -2
RC3H1Q5TC82 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
RC3H1Q5TC82 SNORA25.4-201ENST00000363666 124 ntBASIC2.53□□□□□ -2
RC3H1Q5TC82 RNA5SP450-201ENST00000411206 102 ntBASIC2.53□□□□□ -2
RC3H1Q5TC82 RNU2-19P-201ENST00000517288 84 ntBASIC2.53□□□□□ -2
RC3H1Q5TC82 MIR3140-201ENST00000583685 90 ntBASIC2.53□□□□□ -2
RC3H1Q5TC82 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.53□□□□□ -2
RC3H1Q5TC82 RNU7-10P-201ENST00000607194 63 ntBASIC2.53□□□□□ -2
RC3H1Q5TC82 RNU6-664P-201ENST00000362381 107 ntBASIC2.52□□□□□ -2.01
RC3H1Q5TC82 Y_RNA.226-201ENST00000364337 114 ntBASIC2.52□□□□□ -2.01
RC3H1Q5TC82 Y_RNA.443-201ENST00000384135 111 ntBASIC2.52□□□□□ -2.01
RC3H1Q5TC82 SNORD45A-201ENST00000384512 84 ntBASIC2.52□□□□□ -2.01
RC3H1Q5TC82 AL606490.4-201ENST00000423117 127 ntBASIC2.52□□□□□ -2.01
RC3H1Q5TC82 MIR5089-201ENST00000580047 84 ntBASIC2.52□□□□□ -2.01
RC3H1Q5TC82 MIR548H5-201ENST00000580314 60 ntBASIC2.52□□□□□ -2.01
RC3H1Q5TC82 MIR4696-201ENST00000581431 70 ntBASIC2.52□□□□□ -2.01
RC3H1Q5TC82 MIR101-2-201ENST00000362195 79 ntBASIC2.51□□□□□ -2.01
RC3H1Q5TC82 RNU6-1260P-201ENST00000362944 107 ntBASIC2.51□□□□□ -2.01
RC3H1Q5TC82 RNU1-36P-201ENST00000365130 165 ntBASIC2.51□□□□□ -2.01
RC3H1Q5TC82 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
RC3H1Q5TC82 Y_RNA.809-201ENST00000516058 95 ntBASIC2.51□□□□□ -2.01
RC3H1Q5TC82 MIR6516-201ENST00000630554 81 ntBASIC2.51□□□□□ -2.01
RC3H1Q5TC82 MIR377-201ENST00000362145 69 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 MIR337-201ENST00000362281 93 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 RNU6-403P-201ENST00000363163 104 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 SNORD101-201ENST00000384027 73 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RC3H1Q5TC82 AC092628.1-201ENST00000436250 252 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 MIR18B-201ENST00000454574 71 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 snoU13.25-201ENST00000458945 104 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 MIR2113-201ENST00000459007 91 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 AC097510.1-201ENST00000510945 133 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 AC013244.2-201ENST00000603396 103 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 snoU13.31-201ENST00000607291 104 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 MIR8053-201ENST00000613344 75 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.5□□□□□ -2.01
RC3H1Q5TC82 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.49□□□□□ -2.01
RC3H1Q5TC82 SNRPGP19-201ENST00000603826 189 ntBASIC2.49□□□□□ -2.01
RC3H1Q5TC82 AL627230.6-201ENST00000611129 280 ntBASIC2.49□□□□□ -2.01
RC3H1Q5TC82 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RC3H1Q5TC82 Y_RNA.56-201ENST00000362798 112 ntBASIC2.48□□□□□ -2.01
RC3H1Q5TC82 SNORD45.1-201ENST00000363181 77 ntBASIC2.48□□□□□ -2.01
RC3H1Q5TC82 MIR514B-201ENST00000516774 80 ntBASIC2.48□□□□□ -2.01
RC3H1Q5TC82 RNU6-881P-201ENST00000516813 102 ntBASIC2.48□□□□□ -2.01
RC3H1Q5TC82 AP003716.2-201ENST00000528260 108 ntBASIC2.48□□□□□ -2.01
RC3H1Q5TC82 MIR4287-201ENST00000579398 78 ntBASIC2.48□□□□□ -2.01
RC3H1Q5TC82 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.48□□□□□ -2.01
RC3H1Q5TC82 MIR4781-201ENST00000585250 76 ntBASIC2.48□□□□□ -2.01
RC3H1Q5TC82 GHRLOS.1-201ENST00000610995 70 ntBASIC2.48□□□□□ -2.01
RC3H1Q5TC82 U6.100-201ENST00000636230 99 ntBASIC2.48□□□□□ -2.01
RC3H1Q5TC82 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RC3H1Q5TC82 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
RC3H1Q5TC82 SNORD115-22-201ENST00000364456 82 ntBASIC2.47□□□□□ -2.01
RC3H1Q5TC82 RNU6-580P-201ENST00000365159 107 ntBASIC2.47□□□□□ -2.01
RC3H1Q5TC82 MIR17-201ENST00000385012 84 ntBASIC2.47□□□□□ -2.01
RC3H1Q5TC82 HMGN2P38-201ENST00000423806 265 ntBASIC2.47□□□□□ -2.01
RC3H1Q5TC82 JTBP1-201ENST00000441314 247 ntBASIC2.47□□□□□ -2.01
RC3H1Q5TC82 AL133373.1-201ENST00000497098 94 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms