Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MIR4771-2-201ENST00000577758 74 ntBASIC2.38□□□□□ -2.03
USP46P62068 MIR4771-1-201ENST00000582617 74 ntBASIC2.38□□□□□ -2.03
USP46P62068 ZNF209P-201ENST00000593450 2304 ntBASIC2.38□□□□□ -2.03
USP46P62068 AC103810.8-201ENST00000607347 118 ntBASIC2.38□□□□□ -2.03
USP46P62068 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.38□□□□□ -2.03
USP46P62068 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USP46P62068 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USP46P62068 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USP46P62068 RNU6-1260P-201ENST00000362944 107 ntBASIC2.37□□□□□ -2.03
USP46P62068 RNU6-1051P-201ENST00000365471 102 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR30A-201ENST00000385092 71 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR221-201ENST00000385135 110 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR519A1-201ENST00000385257 85 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR1273D-201ENST00000577266 86 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR5694-201ENST00000581190 76 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR6840-201ENST00000611937 71 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
USP46P62068 SNORD33-201ENST00000362761 85 ntBASIC2.36□□□□□ -2.03
USP46P62068 SNORD113.3-201ENST00000364630 78 ntBASIC2.36□□□□□ -2.03
USP46P62068 snoU13.17-201ENST00000458802 104 ntBASIC2.36□□□□□ -2.03
USP46P62068 RNU6-539P-201ENST00000516665 103 ntBASIC2.36□□□□□ -2.03
USP46P62068 RNU6-165P-201ENST00000517170 99 ntBASIC2.36□□□□□ -2.03
USP46P62068 YWHAEP2-201ENST00000580066 112 ntBASIC2.36□□□□□ -2.03
USP46P62068 YWHAEP3-201ENST00000582767 121 ntBASIC2.36□□□□□ -2.03
USP46P62068 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP46P62068 Y_RNA.207-201ENST00000364142 106 ntBASIC2.35□□□□□ -2.03
USP46P62068 SNORD101-201ENST00000384027 73 ntBASIC2.35□□□□□ -2.03
USP46P62068 RPS27P16-201ENST00000425758 201 ntBASIC2.35□□□□□ -2.03
USP46P62068 SNORA44.1-201ENST00000517031 108 ntBASIC2.35□□□□□ -2.03
USP46P62068 MIR4648-201ENST00000580107 72 ntBASIC2.35□□□□□ -2.03
USP46P62068 U6.100-201ENST00000636230 99 ntBASIC2.35□□□□□ -2.03
USP46P62068 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP46P62068 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USP46P62068 AC048334.1-201ENST00000477975 159 ntBASIC2.34□□□□□ -2.03
USP46P62068 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
USP46P62068 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.34□□□□□ -2.03
USP46P62068 AP000553.5-201ENST00000641933 54 ntBASIC2.34□□□□□ -2.03
USP46P62068 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USP46P62068 RNU6-664P-201ENST00000362381 107 ntBASIC2.33□□□□□ -2.04
USP46P62068 RNY4P3-201ENST00000365254 95 ntBASIC2.33□□□□□ -2.04
USP46P62068 Y_RNA.371-201ENST00000365591 113 ntBASIC2.33□□□□□ -2.04
USP46P62068 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
USP46P62068 MIR17-201ENST00000385012 84 ntBASIC2.33□□□□□ -2.04
USP46P62068 MIR125B2-201ENST00000385128 89 ntBASIC2.33□□□□□ -2.04
USP46P62068 Y_RNA.596-201ENST00000410462 109 ntBASIC2.33□□□□□ -2.04
USP46P62068 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
USP46P62068 AC074348.1-201ENST00000426503 132 ntBASIC2.33□□□□□ -2.04
USP46P62068 RNU6-687P-201ENST00000516443 89 ntBASIC2.33□□□□□ -2.04
USP46P62068 RNU6-765P-201ENST00000516916 99 ntBASIC2.33□□□□□ -2.04
USP46P62068 MIR4696-201ENST00000581431 70 ntBASIC2.33□□□□□ -2.04
USP46P62068 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
USP46P62068 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP46P62068 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
USP46P62068 RNA5SP432-201ENST00000362480 116 ntBASIC2.32□□□□□ -2.04
USP46P62068 SNORA8.1-201ENST00000384250 140 ntBASIC2.32□□□□□ -2.04
USP46P62068 RNU6-587P-201ENST00000391282 106 ntBASIC2.32□□□□□ -2.04
USP46P62068 AC097635.1-201ENST00000450678 155 ntBASIC2.32□□□□□ -2.04
USP46P62068 RNU7-156P-201ENST00000517214 74 ntBASIC2.32□□□□□ -2.04
USP46P62068 AC036111.3-201ENST00000526389 112 ntBASIC2.32□□□□□ -2.04
USP46P62068 AL512310.8-201ENST00000550183 120 ntBASIC2.32□□□□□ -2.04
USP46P62068 MIR3140-201ENST00000583685 90 ntBASIC2.32□□□□□ -2.04
USP46P62068 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.32□□□□□ -2.04
USP46P62068 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.31□□□□□ -2.04
USP46P62068 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USP46P62068 MIR599-201ENST00000385069 95 ntBASIC2.31□□□□□ -2.04
USP46P62068 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
USP46P62068 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
USP46P62068 AC023827.1-201ENST00000569247 97 ntBASIC2.31□□□□□ -2.04
USP46P62068 RNU4-52P-201ENST00000384209 138 ntBASIC2.3□□□□□ -2.04
USP46P62068 SNORA75.2-201ENST00000391138 150 ntBASIC2.3□□□□□ -2.04
USP46P62068 SNORA75.3-201ENST00000391231 150 ntBASIC2.3□□□□□ -2.04
USP46P62068 RNU6-634P-201ENST00000459134 106 ntBASIC2.3□□□□□ -2.04
USP46P62068 AC138907.6-201ENST00000568401 126 ntBASIC2.3□□□□□ -2.04
USP46P62068 AC138869.1-201ENST00000568623 124 ntBASIC2.3□□□□□ -2.04
USP46P62068 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.3□□□□□ -2.04
USP46P62068 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.3□□□□□ -2.04
USP46P62068 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USP46P62068 Y_RNA.42-201ENST00000362660 108 ntBASIC2.29□□□□□ -2.04
USP46P62068 RNU6-364P-201ENST00000384387 107 ntBASIC2.29□□□□□ -2.04
USP46P62068 RN7SKP88-201ENST00000516847 250 ntBASIC2.29□□□□□ -2.04
USP46P62068 7SK.8-201ENST00000612110 250 ntBASIC2.29□□□□□ -2.04
USP46P62068 7SK.11-201ENST00000615477 250 ntBASIC2.29□□□□□ -2.04
USP46P62068 7SK.13-201ENST00000622040 250 ntBASIC2.29□□□□□ -2.04
USP46P62068 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.04
USP46P62068 RNU6-535P-201ENST00000384722 107 ntBASIC2.28□□□□□ -2.04
USP46P62068 MIR154-201ENST00000385243 84 ntBASIC2.28□□□□□ -2.04
USP46P62068 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.28□□□□□ -2.04
USP46P62068 snoU13.15-201ENST00000459407 104 ntBASIC2.28□□□□□ -2.04
USP46P62068 snoU13.26-201ENST00000459452 105 ntBASIC2.28□□□□□ -2.04
USP46P62068 AC125388.1-201ENST00000459631 156 ntBASIC2.28□□□□□ -2.04
USP46P62068 SNORA31.2-201ENST00000516019 134 ntBASIC2.28□□□□□ -2.04
USP46P62068 RNA5SP200-201ENST00000516360 103 ntBASIC2.28□□□□□ -2.04
USP46P62068 RNU7-40P-201ENST00000516397 64 ntBASIC2.28□□□□□ -2.04
USP46P62068 MIR514B-201ENST00000516774 80 ntBASIC2.28□□□□□ -2.04
USP46P62068 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.04
USP46P62068 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.27□□□□□ -2.05
USP46P62068 RNU6-330P-201ENST00000363015 107 ntBASIC2.27□□□□□ -2.05
USP46P62068 Y_RNA.340-201ENST00000365330 92 ntBASIC2.27□□□□□ -2.05
USP46P62068 RNU6-649P-201ENST00000384463 107 ntBASIC2.27□□□□□ -2.05
USP46P62068 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 233.8 ms