Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RNU1-91P-201ENST00000364746 163 ntBASIC2.22□□□□□ -2.05
CHRNA4P43681 MIR518A2-201ENST00000384966 87 ntBASIC2.22□□□□□ -2.05
CHRNA4P43681 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.22□□□□□ -2.05
CHRNA4P43681 RNA5SP501-201ENST00000410990 112 ntBASIC2.22□□□□□ -2.05
CHRNA4P43681 AL691482.2-201ENST00000457453 84 ntBASIC2.22□□□□□ -2.05
CHRNA4P43681 AC108210.2-201ENST00000503681 201 ntBASIC2.22□□□□□ -2.05
CHRNA4P43681 Y_RNA.809-201ENST00000516058 95 ntBASIC2.22□□□□□ -2.05
CHRNA4P43681 RNU6-752P-201ENST00000516376 102 ntBASIC2.22□□□□□ -2.05
CHRNA4P43681 SNORA31.11-201ENST00000516528 139 ntBASIC2.22□□□□□ -2.05
CHRNA4P43681 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CHRNA4P43681 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
CHRNA4P43681 SNORA3A-201ENST00000364113 130 ntBASIC2.21□□□□□ -2.06
CHRNA4P43681 RNU6-935P-201ENST00000410371 100 ntBASIC2.21□□□□□ -2.06
CHRNA4P43681 Y_RNA.722-201ENST00000517279 114 ntBASIC2.21□□□□□ -2.06
CHRNA4P43681 MIR4648-201ENST00000580107 72 ntBASIC2.21□□□□□ -2.06
CHRNA4P43681 MIR548H5-201ENST00000580314 60 ntBASIC2.21□□□□□ -2.06
CHRNA4P43681 uc_338.6-201ENST00000613544 171 ntBASIC2.21□□□□□ -2.06
CHRNA4P43681 RNU6-1079P-201ENST00000362861 110 ntBASIC2.2□□□□□ -2.06
CHRNA4P43681 RPL30P7-201ENST00000479312 323 ntBASIC2.2□□□□□ -2.06
CHRNA4P43681 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.2□□□□□ -2.06
CHRNA4P43681 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.2□□□□□ -2.06
CHRNA4P43681 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
CHRNA4P43681 MIR3192-201ENST00000584920 77 ntBASIC2.19□□□□□ -2.06
CHRNA4P43681 MIR101-2-201ENST00000362195 79 ntBASIC2.18□□□□□ -2.06
CHRNA4P43681 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
CHRNA4P43681 SNORA25.3-201ENST00000363205 127 ntBASIC2.18□□□□□ -2.06
CHRNA4P43681 SNORA6-201ENST00000384033 151 ntBASIC2.18□□□□□ -2.06
CHRNA4P43681 MIR451A-201ENST00000385059 72 ntBASIC2.18□□□□□ -2.06
CHRNA4P43681 RNU6-360P-201ENST00000390944 104 ntBASIC2.18□□□□□ -2.06
CHRNA4P43681 RNU6-274P-201ENST00000459566 107 ntBASIC2.18□□□□□ -2.06
CHRNA4P43681 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CHRNA4P43681 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHRNA4P43681 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 MIR377-201ENST00000362145 69 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 Y_RNA.56-201ENST00000362798 112 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 RNU6-203P-201ENST00000384038 104 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 MIR194-1-201ENST00000384892 85 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 SNORD41-201ENST00000386967 70 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 RNU6-1177P-201ENST00000391058 104 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 SNORD23.1-201ENST00000408212 104 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 AL591806.2-201ENST00000433122 173 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 AC097635.1-201ENST00000450678 155 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 MIR2115-201ENST00000516657 100 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 MIR7978-201ENST00000636158 59 ntBASIC2.17□□□□□ -2.06
CHRNA4P43681 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHRNA4P43681 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHRNA4P43681 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CHRNA4P43681 RNU1-36P-201ENST00000365130 165 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 RNU6-808P-201ENST00000391233 108 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 SNORD93-201ENST00000408813 74 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 RNA5SP100-201ENST00000410903 110 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 RNA5SP59-201ENST00000410922 110 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 AL356320.1-201ENST00000429616 163 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 RNU6-542P-201ENST00000516405 103 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 MIR5002-201ENST00000584713 97 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 AC092634.7-201ENST00000621022 103 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 MIR4773-1-201ENST00000637203 78 ntBASIC2.16□□□□□ -2.06
CHRNA4P43681 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CHRNA4P43681 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHRNA4P43681 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CHRNA4P43681 RNU6-654P-201ENST00000364373 107 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 Y_RNA.258-201ENST00000364613 105 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 Y_RNA.375-201ENST00000365625 101 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 RNU6-1052P-201ENST00000411398 104 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 AC004965.1-201ENST00000413033 213 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 AC244098.3-201ENST00000424803 96 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 RNU6-982P-201ENST00000516216 102 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 RNU6-719P-201ENST00000516671 104 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 RNU6-548P-201ENST00000517083 115 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 AC013244.2-201ENST00000603396 103 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 MIR6873-201ENST00000622788 63 ntBASIC2.15□□□□□ -2.07
CHRNA4P43681 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
CHRNA4P43681 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHRNA4P43681 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CHRNA4P43681 RNU6-403P-201ENST00000363163 104 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 RNU6-940P-201ENST00000363433 104 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 SNORA25.5-201ENST00000363782 126 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 RNU6-382P-201ENST00000365181 106 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 RNA5SP247-201ENST00000411181 105 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 RNU6-1054P-201ENST00000411293 104 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 AL603825.1-201ENST00000438481 80 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 MIR18B-201ENST00000454574 71 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 RN7SL274P-201ENST00000492268 272 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 RNU6-1265P-201ENST00000516342 103 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 SNORA31.17-201ENST00000516953 127 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 MIR466-201ENST00000580653 84 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 MIR3920-201ENST00000581751 86 ntBASIC2.14□□□□□ -2.07
CHRNA4P43681 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CHRNA4P43681 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHRNA4P43681 RNU6-446P-201ENST00000362827 106 ntBASIC2.13□□□□□ -2.07
CHRNA4P43681 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
CHRNA4P43681 SNORA67.3-201ENST00000384366 140 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms