Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNU6-690P-201ENST00000365242 106 ntBASIC-1.39□□□□□ -2.63
CASQ1P31415 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.39□□□□□ -2.63
CASQ1P31415 SPINT5P-201ENST00000448174 155 ntBASIC-1.39□□□□□ -2.63
CASQ1P31415 RNU6-138P-201ENST00000515952 107 ntBASIC-1.39□□□□□ -2.63
CASQ1P31415 MIR548O2-201ENST00000616090 70 ntBASIC-1.39□□□□□ -2.63
CASQ1P31415 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.4□□□□□ -2.63
CASQ1P31415 RNU6-616P-201ENST00000384353 107 ntBASIC-1.4□□□□□ -2.63
CASQ1P31415 MIR147A-201ENST00000385079 72 ntBASIC-1.4□□□□□ -2.63
CASQ1P31415 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.4□□□□□ -2.63
CASQ1P31415 RNU6-240P-201ENST00000516098 97 ntBASIC-1.4□□□□□ -2.63
CASQ1P31415 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.4□□□□□ -2.63
CASQ1P31415 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.4□□□□□ -2.63
CASQ1P31415 AL442663.2-201ENST00000554385 511 ntBASIC-1.4□□□□□ -2.63
CASQ1P31415 AC090574.1-201ENST00000623186 233 ntBASIC-1.4□□□□□ -2.63
CASQ1P31415 SNORD36A-201ENST00000362874 73 ntBASIC-1.41□□□□□ -2.64
CASQ1P31415 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.41□□□□□ -2.64
CASQ1P31415 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.41□□□□□ -2.64
CASQ1P31415 SNORD116-2-201ENST00000384274 95 ntBASIC-1.41□□□□□ -2.64
CASQ1P31415 SNORA79-201ENST00000408376 140 ntBASIC-1.41□□□□□ -2.64
CASQ1P31415 AC138393.2-201ENST00000414742 246 ntBASIC-1.41□□□□□ -2.64
CASQ1P31415 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.41□□□□□ -2.64
CASQ1P31415 IGKV1-22-201ENST00000524313 326 ntBASIC-1.41□□□□□ -2.64
CASQ1P31415 RNU6-450P-201ENST00000364654 107 ntBASIC-1.42□□□□□ -2.64
CASQ1P31415 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.42□□□□□ -2.64
CASQ1P31415 RNU6-592P-201ENST00000411333 103 ntBASIC-1.42□□□□□ -2.64
CASQ1P31415 ELOCP20-201ENST00000422460 345 ntBASIC-1.42□□□□□ -2.64
CASQ1P31415 AL353813.1-201ENST00000440700 253 ntBASIC-1.42□□□□□ -2.64
CASQ1P31415 SCARNA18B-201ENST00000458806 135 ntBASIC-1.42□□□□□ -2.64
CASQ1P31415 SERF1AP1-201ENST00000514575 187 ntBASIC-1.42□□□□□ -2.64
CASQ1P31415 MIR382-201ENST00000637119 76 ntBASIC-1.42□□□□□ -2.64
CASQ1P31415 RNU6-957P-201ENST00000363652 99 ntBASIC-1.43□□□□□ -2.64
CASQ1P31415 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.43□□□□□ -2.64
CASQ1P31415 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.43□□□□□ -2.64
CASQ1P31415 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.43□□□□□ -2.64
CASQ1P31415 MT-TL1-201ENST00000386347 75 ntBASIC-1.43□□□□□ -2.64
CASQ1P31415 RNU7-164P-201ENST00000459221 62 ntBASIC-1.43□□□□□ -2.64
CASQ1P31415 RNU6-762P-201ENST00000517107 102 ntBASIC-1.43□□□□□ -2.64
CASQ1P31415 AC037487.3-201ENST00000606668 112 ntBASIC-1.43□□□□□ -2.64
CASQ1P31415 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.43□□□□□ -2.64
CASQ1P31415 RNU6-54P-201ENST00000365563 107 ntBASIC-1.44□□□□□ -2.64
CASQ1P31415 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.44□□□□□ -2.64
CASQ1P31415 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.44□□□□□ -2.64
CASQ1P31415 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.44□□□□□ -2.64
CASQ1P31415 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.44□□□□□ -2.64
CASQ1P31415 MTND5P22-201ENST00000458380 195 ntBASIC-1.44□□□□□ -2.64
CASQ1P31415 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.44□□□□□ -2.64
CASQ1P31415 RNU6-976P-201ENST00000516086 111 ntBASIC-1.44□□□□□ -2.64
CASQ1P31415 AC021443.1-201ENST00000604478 211 ntBASIC-1.44□□□□□ -2.64
CASQ1P31415 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.44□□□□□ -2.64
CASQ1P31415 AL365265.1-201ENST00000621045 234 ntBASIC-1.44□□□□□ -2.64
CASQ1P31415 SNORD74.6-201ENST00000364796 70 ntBASIC-1.45□□□□□ -2.64
CASQ1P31415 SNORA63.7-201ENST00000365579 123 ntBASIC-1.45□□□□□ -2.64
CASQ1P31415 RNU6-823P-201ENST00000391042 103 ntBASIC-1.45□□□□□ -2.64
CASQ1P31415 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.45□□□□□ -2.64
CASQ1P31415 MIR1265-201ENST00000408444 86 ntBASIC-1.45□□□□□ -2.64
CASQ1P31415 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.45□□□□□ -2.64
CASQ1P31415 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.45□□□□□ -2.64
CASQ1P31415 AC140658.3-201ENST00000567603 271 ntBASIC-1.45□□□□□ -2.64
CASQ1P31415 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.46□□□□□ -2.64
CASQ1P31415 AL121914.1-201ENST00000450188 156 ntBASIC-1.46□□□□□ -2.64
CASQ1P31415 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.46□□□□□ -2.64
CASQ1P31415 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.46□□□□□ -2.64
CASQ1P31415 AC080013.6-201ENST00000606185 215 ntBASIC-1.46□□□□□ -2.64
CASQ1P31415 AC073869.6-201ENST00000640656 341 ntBASIC-1.46□□□□□ -2.64
CASQ1P31415 SNORD115-23-201ENST00000364461 82 ntBASIC-1.47□□□□□ -2.64
CASQ1P31415 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.47□□□□□ -2.64
CASQ1P31415 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.47□□□□□ -2.64
CASQ1P31415 RNU6-337P-201ENST00000391243 106 ntBASIC-1.47□□□□□ -2.64
CASQ1P31415 SNORD42B-201ENST00000458893 67 ntBASIC-1.47□□□□□ -2.64
CASQ1P31415 SNORD19B-201ENST00000459623 84 ntBASIC-1.47□□□□□ -2.64
CASQ1P31415 AC026407.1-201ENST00000518369 204 ntBASIC-1.47□□□□□ -2.64
CASQ1P31415 AC138907.4-201ENST00000570107 226 ntBASIC-1.47□□□□□ -2.64
CASQ1P31415 MIR1302-1-201ENST00000637932 143 ntBASIC-1.47□□□□□ -2.64
CASQ1P31415 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 SNORD27-201ENST00000363981 72 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 MIR1252-201ENST00000408861 65 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 RNA5SP25-201ENST00000410815 110 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 RNU6-274P-201ENST00000459566 107 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 MIR4696-201ENST00000581431 70 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 AL132765.2-201ENST00000610812 351 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 MIR6773-201ENST00000612812 74 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.48□□□□□ -2.65
CASQ1P31415 RNU6-235P-201ENST00000362644 107 ntBASIC-1.49□□□□□ -2.65
CASQ1P31415 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.49□□□□□ -2.65
CASQ1P31415 RNU4-17P-201ENST00000365598 141 ntBASIC-1.49□□□□□ -2.65
CASQ1P31415 SNORD77B-201ENST00000391112 67 ntBASIC-1.49□□□□□ -2.65
CASQ1P31415 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 245.5 ms