Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL359851.1-201ENST00000569460 4997 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 SNORD36A-201ENST00000362874 73 ntBASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 RNU6-686P-201ENST00000364839 107 ntBASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 RNU6-1065P-201ENST00000384513 106 ntBASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 Y_RNA.532-201ENST00000384590 113 ntBASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 MIR516A2-201ENST00000384888 90 ntBASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 MIR516A1-201ENST00000385033 90 ntBASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 RNA5SP489-201ENST00000410986 109 ntBASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 snoU13.25-201ENST00000458945 104 ntBASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 SNORA4-201ENST00000584302 138 ntBASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 AL359821.1-201ENST00000605519 182 ntBASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CSB-PGBD3P0DP91 RNU6-132P-201ENST00000383863 107 ntBASIC2.4□□□□□ -2.03
CSB-PGBD3P0DP91 RNU6-811P-201ENST00000384069 107 ntBASIC2.4□□□□□ -2.03
CSB-PGBD3P0DP91 SNORA72.6-201ENST00000384520 129 ntBASIC2.4□□□□□ -2.03
CSB-PGBD3P0DP91 AC008834.1-201ENST00000511612 175 ntBASIC2.4□□□□□ -2.03
CSB-PGBD3P0DP91 TRMT112P2-201ENST00000512910 132 ntBASIC2.4□□□□□ -2.03
CSB-PGBD3P0DP91 RNU6-75P-201ENST00000515944 104 ntBASIC2.4□□□□□ -2.03
CSB-PGBD3P0DP91 RNU6-205P-201ENST00000390858 107 ntBASIC2.39□□□□□ -2.03
CSB-PGBD3P0DP91 SNORA18.5-201ENST00000516616 101 ntBASIC2.39□□□□□ -2.03
CSB-PGBD3P0DP91 RNU1-40P-201ENST00000516816 164 ntBASIC2.39□□□□□ -2.03
CSB-PGBD3P0DP91 RNU1-97P-201ENST00000516872 164 ntBASIC2.39□□□□□ -2.03
CSB-PGBD3P0DP91 MIR502-201ENST00000606349 86 ntBASIC2.39□□□□□ -2.03
CSB-PGBD3P0DP91 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CSB-PGBD3P0DP91 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSB-PGBD3P0DP91 AC008163.1-202ENST00000636004 2889 ntBASIC2.38□□□□□ -2.03
CSB-PGBD3P0DP91 RNU4-52P-201ENST00000384209 138 ntBASIC2.38□□□□□ -2.03
CSB-PGBD3P0DP91 RNU6-1165P-201ENST00000410119 107 ntBASIC2.38□□□□□ -2.03
CSB-PGBD3P0DP91 MIR4536-1-201ENST00000583537 88 ntBASIC2.38□□□□□ -2.03
CSB-PGBD3P0DP91 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSB-PGBD3P0DP91 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSB-PGBD3P0DP91 HMGN2P38-201ENST00000423806 265 ntBASIC2.37□□□□□ -2.03
CSB-PGBD3P0DP91 RPL30P7-201ENST00000479312 323 ntBASIC2.37□□□□□ -2.03
CSB-PGBD3P0DP91 MIR8070-201ENST00000616510 88 ntBASIC2.37□□□□□ -2.03
CSB-PGBD3P0DP91 Y_RNA.283-201ENST00000364798 112 ntBASIC2.36□□□□□ -2.03
CSB-PGBD3P0DP91 RNU6-396P-201ENST00000365369 105 ntBASIC2.36□□□□□ -2.03
CSB-PGBD3P0DP91 SNORA67.5-201ENST00000391036 107 ntBASIC2.36□□□□□ -2.03
CSB-PGBD3P0DP91 RNU7-106P-201ENST00000459514 67 ntBASIC2.36□□□□□ -2.03
CSB-PGBD3P0DP91 MIR3064-201ENST00000581130 66 ntBASIC2.36□□□□□ -2.03
CSB-PGBD3P0DP91 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CSB-PGBD3P0DP91 MIR635-201ENST00000384830 98 ntBASIC2.35□□□□□ -2.03
CSB-PGBD3P0DP91 RNU6-1254P-201ENST00000391266 104 ntBASIC2.35□□□□□ -2.03
CSB-PGBD3P0DP91 AC245517.4-201ENST00000448601 281 ntBASIC2.35□□□□□ -2.03
CSB-PGBD3P0DP91 MIR4484-201ENST00000582855 83 ntBASIC2.35□□□□□ -2.03
CSB-PGBD3P0DP91 MIR4264-201ENST00000583520 66 ntBASIC2.35□□□□□ -2.03
CSB-PGBD3P0DP91 AC104996.3-201ENST00000590718 94 ntBASIC2.35□□□□□ -2.03
CSB-PGBD3P0DP91 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CSB-PGBD3P0DP91 Y_RNA.118-201ENST00000363300 101 ntBASIC2.34□□□□□ -2.03
CSB-PGBD3P0DP91 SNORD90-201ENST00000391145 111 ntBASIC2.34□□□□□ -2.03
CSB-PGBD3P0DP91 RNU1-78P-201ENST00000391248 165 ntBASIC2.34□□□□□ -2.03
CSB-PGBD3P0DP91 RNA5SP338-201ENST00000410495 85 ntBASIC2.34□□□□□ -2.03
CSB-PGBD3P0DP91 RNU7-62P-201ENST00000458856 62 ntBASIC2.34□□□□□ -2.03
CSB-PGBD3P0DP91 FGF7P7-201ENST00000514120 227 ntBASIC2.34□□□□□ -2.03
CSB-PGBD3P0DP91 MIR3664-201ENST00000579074 99 ntBASIC2.34□□□□□ -2.03
CSB-PGBD3P0DP91 MIR4422-201ENST00000581938 83 ntBASIC2.34□□□□□ -2.03
CSB-PGBD3P0DP91 MIRLET7F1-201ENST00000362202 87 ntBASIC2.33□□□□□ -2.04
CSB-PGBD3P0DP91 SNORA16.1-201ENST00000364597 132 ntBASIC2.33□□□□□ -2.04
CSB-PGBD3P0DP91 MIR499A-201ENST00000384903 122 ntBASIC2.33□□□□□ -2.04
CSB-PGBD3P0DP91 MIR520H-201ENST00000385126 88 ntBASIC2.33□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-531P-201ENST00000516694 104 ntBASIC2.33□□□□□ -2.04
CSB-PGBD3P0DP91 SNORA25.16-201ENST00000516741 121 ntBASIC2.33□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-1015P-201ENST00000517121 99 ntBASIC2.33□□□□□ -2.04
CSB-PGBD3P0DP91 AL512310.8-201ENST00000550183 120 ntBASIC2.33□□□□□ -2.04
CSB-PGBD3P0DP91 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-590P-201ENST00000365039 107 ntBASIC2.32□□□□□ -2.04
CSB-PGBD3P0DP91 SNORA25.9-201ENST00000365087 128 ntBASIC2.32□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-411P-201ENST00000384451 107 ntBASIC2.32□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-243P-201ENST00000391140 107 ntBASIC2.32□□□□□ -2.04
CSB-PGBD3P0DP91 MIR6516-201ENST00000630554 81 ntBASIC2.32□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-957P-201ENST00000363652 99 ntBASIC2.31□□□□□ -2.04
CSB-PGBD3P0DP91 Y_RNA.491-201ENST00000384417 107 ntBASIC2.31□□□□□ -2.04
CSB-PGBD3P0DP91 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-717P-201ENST00000459076 104 ntBASIC2.31□□□□□ -2.04
CSB-PGBD3P0DP91 AL133373.1-201ENST00000497098 94 ntBASIC2.31□□□□□ -2.04
CSB-PGBD3P0DP91 Y_RNA.660-201ENST00000516002 120 ntBASIC2.31□□□□□ -2.04
CSB-PGBD3P0DP91 MIR4491-201ENST00000581087 68 ntBASIC2.31□□□□□ -2.04
CSB-PGBD3P0DP91 MIR4448-201ENST00000584360 86 ntBASIC2.31□□□□□ -2.04
CSB-PGBD3P0DP91 BX248123.2-201ENST00000606318 124 ntBASIC2.31□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-654P-201ENST00000364373 107 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 Y_RNA.588-201ENST00000391254 102 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 MIR934-201ENST00000401241 83 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 MIR1185-1-201ENST00000408598 86 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-380P-201ENST00000410207 107 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 RNA5SP95-201ENST00000410319 137 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 RPS27P16-201ENST00000425758 201 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 RNU7-95P-201ENST00000459222 64 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 RN7SL274P-201ENST00000492268 272 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 MIR2115-201ENST00000516657 100 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-539P-201ENST00000516665 103 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-448P-201ENST00000517052 107 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 AP003716.2-201ENST00000528260 108 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 MIR664A-201ENST00000626086 82 ntBASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CSB-PGBD3P0DP91 MT-TF-201ENST00000387314 71 ntBASIC2.29□□□□□ -2.04
CSB-PGBD3P0DP91 MT-TN-201ENST00000387400 73 ntBASIC2.29□□□□□ -2.04
CSB-PGBD3P0DP91 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CSB-PGBD3P0DP91 SNORD77.2-201ENST00000391045 68 ntBASIC2.29□□□□□ -2.04
CSB-PGBD3P0DP91 SNORD63B-201ENST00000411005 70 ntBASIC2.29□□□□□ -2.04
CSB-PGBD3P0DP91 RNU6-165P-201ENST00000517170 99 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms